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KJC3_012380-T1, KJC3_012380-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012380-T1
Unique NameKJC3_012380-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3407742..3408765-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012380-T1 ID=KJC3_012380-T1|Name=KJC3_012380-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1024bp|location=Sequence derived from alignment at ch8:3407742..3408765- (Aspergillus niger KJC3)
CTTCCAGGCTTGCTTATCTATCCCCTCATCTCCCTCCTCCCTTGCAATTA
CTACATACGGGATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTAA
GTCATACCCCGCGTTCCCCCGGAATGCCCCATCTCCATGCATGAAATACA
CCCCCTAACGCAGGAACAGGGGGAAGACGCGGCTCGCGAAATGGTATGCG
CCGTATAGCGTAAGTGCACCCCTACTTGGATGGAATCGAATGACGGCTAA
TATTTTTGCTTTATGATAGGATGAAGAAAAAGTCAAGCTAAAGGGCGAGG
TTCGTTATATGCCCCGGACCACTACTATCTACTACTACGGCACCCCGCCG
CGGAACGACATAATAATGTATGCTGGATAGGTACATCGCCTGGTCGCCCC
GCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCA
AGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGAC
GCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGA
GGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCA
ATTTCTACAAAGTGAGTGATGCTAGAGGCTGGTGGAGTGGTGCCACCGGA
ATTGTTTGGAATGGGAAAATAGGTAGCAGACGGATGAGCTGATGGTTGTG
CAGGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGA
AACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGG
AATGAGGGAGATAATATGGGGGATATAGCAAGAAGGGGGAAGTATAAAGT
ATCGCTCTGTGGCGATACAATTGCATATATGACCACGGGATATGGTCAAG
AGGAGTTAGGGGTTCATTAGGCTGATAAGTCTGGGCGTGTTTCTTTATAT
ATCATTATTGCATGCGGTTGCTTTCAACGTTGTACCGGTTCGCGACTGTT
CATACCCTTTCTGGAATACCTGCA
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Coding sequence (CDS) from alignment at ch8:3407742..3408765-

>KJC3_012380-T1 ID=KJC3_012380-T1|Name=KJC3_012380-T1|organism=Aspergillus niger KJC3|type=CDS|length=2190bp|location=Sequence derived from alignment at ch8:3407742..3408765- (Aspergillus niger KJC3)
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTC
GTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTT
GTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCG
AGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTT
TGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTAT
AGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATT
CTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGT
CGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCC
TGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAG
CGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGC
CTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCACT
TCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGAC
TTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGA
GGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTC
TCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTG
TTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAG
GTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGC
GAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAG
GTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGC
AACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGG
TGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAAT
TTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGC
GGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTT
GTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGA
GAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTT
GGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAAT
ACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGG
AGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGA
ACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGT
TCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGAT
GAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAAT
GGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGC
CAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAA
ACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGA
ATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATT
TCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGG
TTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCT
CGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACG
TTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTC
AAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGT
ATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
APS2KJC3_012380Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012380-T1KJC3_012380-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012380-T1.cdsKJC3_012380-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012380-T1.utr3p1KJC3_012380-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012380-T1.exon5KJC3_012380-T1.exon5Aspergillus niger KJC3exon
KJC3_012380-T1.exon4KJC3_012380-T1.exon4Aspergillus niger KJC3exon
KJC3_012380-T1.exon3KJC3_012380-T1.exon3Aspergillus niger KJC3exon
KJC3_012380-T1.exon2KJC3_012380-T1.exon2Aspergillus niger KJC3exon
KJC3_012380-T1.exon1KJC3_012380-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012380-T1.utr5p1KJC3_012380-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR022775
DBxrefInterPro:IPR016635
DBxrefPFAM:PF01217
ProductAP-2 complex subunit sigma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3407742..3408765 -
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