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KJC3_012384-T1, KJC3_012384-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012384-T1
Unique NameKJC3_012384-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3413839..3414731-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012384-T1 ID=KJC3_012384-T1|Name=KJC3_012384-T1|organism=Aspergillus niger KJC3|type=mRNA|length=893bp|location=Sequence derived from alignment at ch8:3413839..3414731- (Aspergillus niger KJC3)
ATCCATCCAAACCAAACCAAACCAAGCAAAGAAAAACAACCAAAATGTCC
TCCACAATCCCTACCACGAGCGGCACCCAGCCCCTCGACCCCTACAAAGC
CAAATCCCTAGATGACGACCTCCCCCTCGCCCAAAAAATCACCGACCTGT
CGACCTTCATCACAGAACAGAAATTCGGCATGCTCACGACAAAGTCCTCG
GACGATGATCTGCTCACGAGTCGGTGTATGGCTCTTGCTGGGAAGGTAGC
ATAGCATTCCCCCCCGTCTCTCCCATACCTCATACATACCGAACCACATT
TATGAATGAATCTCTTCCCCCAAACTAATACACATGAACTATGTAAATAG
GAAAGAGGCGACACCACCCTAATCTTCCACACGAACCTCTTCAGCCACAA
GACTATGGATTTGACTGCCCACCCCACCGAAACCAACATGTCCTTCTTAG
ACCCGATCAGCGGGTCGTGGGCATCTATTTCTGGAACGGCGAGTATCGTG
GCTGATAAGGAGACCGTCAAGAAGTATTACTCGCCGGCGCTGCAGGCGTG
GTTGGGCGATTTGGGGGATGGCGTGCATGATGGTGGACCCGAGGATCCCC
GGATCGGGGTGATTAAGCTGGAGGCGAAGACGGCGGTGTATGCGGTCTCC
AGGAAGGGGGTTATTGGCCGTGCGGTGGAGACGGTGAAGAGTGTTGCTAG
GGGGGATGTGCCCGCTGTTAATAGTATTAGGGAGGTCGGGAGGGGGGAGT
TTGATGAGTGTAAGTTTTTGTTCTTTCCTTTGGGAGTTGGGTTGGTAGTA
GTTCCTGACTGATTGGGTTAATAGGGAGACGGACGCATCCTGAGTAAATC
TGTGGGTCTTGTTGGGTGAGTGCTGGTATGGGCTATGAGATAT
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Coding sequence (CDS) from alignment at ch8:3413839..3414731-

>KJC3_012384-T1 ID=KJC3_012384-T1|Name=KJC3_012384-T1|organism=Aspergillus niger KJC3|type=CDS|length=1899bp|location=Sequence derived from alignment at ch8:3413839..3414731- (Aspergillus niger KJC3)
GGAGACGGACGCATCCTGAGTAAGAAAGAGGCGACACCACCCTAATCTTC
CACACGAACCTCTTCAGCCACAAGACTATGGATTTGACTGCCCACCCCAC
CGAAACCAACATGTCCTTCTTAGACCCGATCAGCGGGTCGTGGGCATCTA
TTTCTGGAACGGCGAGTATCGTGGCTGATAAGGAGACCGTCAAGAAGTAT
TACTCGCCGGCGCTGCAGGCGTGGTTGGGCGATTTGGGGGATGGCGTGCA
TGATGGTGGACCCGAGGATCCCCGGATCGGGGTGATTAAGCTGGAGGCGA
AGACGGCGGTGTATGCGGTCTCCAGGAAGGGGGTTATTGGCCGTGCGGTG
GAGACGGTGAAGAGTGTTGCTAGGGGGGATGTGCCCGCTGTTAATAGTAT
TAGGGAGGTCGGGAGGGGGGAGTTTGATGAGTATGTCCTCCACAATCCCT
ACCACGAGCGGCACCCAGCCCCTCGACCCCTACAAAGCCAAATCCCTAGA
TGACGACCTCCCCCTCGCCCAAAAAATCACCGACCTGTCGACCTTCATCA
CAGAACAGAAATTCGGCATGCTCACGACAAAGTCCTCGGACGATGATCTG
CTCACGAGTCGGTGTATGGCTCTTGCTGGGAAGGGAGACGGACGCATCCT
GAGTAAGAAAGAGGCGACACCACCCTAATCTTCCACACGAACCTCTTCAG
CCACAAGACTATGGATTTGACTGCCCACCCCACCGAAACCAACATGTCCT
TCTTAGACCCGATCAGCGGGTCGTGGGCATCTATTTCTGGAACGGCGAGT
ATCGTGGCTGATAAGGAGACCGTCAAGAAGTATTACTCGCCGGCGCTGCA
GGCGTGGTTGGGCGATTTGGGGGATGGCGTGCATGATGGTGGACCCGAGG
ATCCCCGGATCGGGGTGATTAAGCTGGAGGCGAAGACGGCGGTGTATGCG
GTCTCCAGGAAGGGGGTTATTGGCCGTGCGGTGGAGACGGTGAAGAGTGT
TGCTAGGGGGGATGTGCCCGCTGTTAATAGTATTAGGGAGGTCGGGAGGG
GGGAGTTTGATGAGTATGTCCTCCACAATCCCTACCACGAGCGGCACCCA
GCCCCTCGACCCCTACAAAGCCAAATCCCTAGATGACGACCTCCCCCTCG
CCCAAAAAATCACCGACCTGTCGACCTTCATCACAGAACAGAAATTCGGC
ATGCTCACGACAAAGTCCTCGGACGATGATCTGCTCACGAGTCGGTGTAT
GGCTCTTGCTGGGAAGGGAGACGGACGCATCCTGAGTAAGAAAGAGGCGA
CACCACCCTAATCTTCCACACGAACCTCTTCAGCCACAAGACTATGGATT
TGACTGCCCACCCCACCGAAACCAACATGTCCTTCTTAGACCCGATCAGC
GGGTCGTGGGCATCTATTTCTGGAACGGCGAGTATCGTGGCTGATAAGGA
GACCGTCAAGAAGTATTACTCGCCGGCGCTGCAGGCGTGGTTGGGCGATT
TGGGGGATGGCGTGCATGATGGTGGACCCGAGGATCCCCGGATCGGGGTG
ATTAAGCTGGAGGCGAAGACGGCGGTGTATGCGGTCTCCAGGAAGGGGGT
TATTGGCCGTGCGGTGGAGACGGTGAAGAGTGTTGCTAGGGGGGATGTGC
CCGCTGTTAATAGTATTAGGGAGGTCGGGAGGGGGGAGTTTGATGAGTAT
GTCCTCCACAATCCCTACCACGAGCGGCACCCAGCCCCTCGACCCCTACA
AAGCCAAATCCCTAGATGACGACCTCCCCCTCGCCCAAAAAATCACCGAC
CTGTCGACCTTCATCACAGAACAGAAATTCGGCATGCTCACGACAAAGTC
CTCGGACGATGATCTGCTCACGAGTCGGTGTATGGCTCTTGCTGGGAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012384KJC3_012384Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012384-T1KJC3_012384-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012384-T1.cdsKJC3_012384-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012384-T1.utr3p1KJC3_012384-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012384-T1.exon3KJC3_012384-T1.exon3Aspergillus niger KJC3exon
KJC3_012384-T1.exon2KJC3_012384-T1.exon2Aspergillus niger KJC3exon
KJC3_012384-T1.exon1KJC3_012384-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012384-T1.utr5p1KJC3_012384-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038725
DBxrefInterPro:IPR012349
DBxrefPFAM:PF16242
DBxrefPFAM:PF01243
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3413839..3414731 -
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