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KJC3_012391-T1, KJC3_012391-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012391-T1
Unique NameKJC3_012391-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3433460..3436169-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012391-T1 ID=KJC3_012391-T1|Name=KJC3_012391-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2710bp|location=Sequence derived from alignment at ch8:3433460..3436169- (Aspergillus niger KJC3)
GTATACATCATCATTTGATTAGATGCTACTCACTCACTTTTTATCTGCGA
GCTACTTGATACCCAATATGGTTATAGTTCATTTCTGACGGTCATTAATC
TATCCGTGTTTCCAGGCAGCATACCTCTACGGTAGCCTGCAGGCTACTTA
GTAGACGCCTGTAATATTACTCTTTTGGGATTCGTCATCTGTCCTCTCTT
TGAATTTGCTTTTCTTCAATATCGGTGACTCTTCTCCTATCTCCTTGACT
TTTATGTGTATTAGTTCTCTTCACGATGCCCAGATTAGATGGTAAGTATA
ATTCCTCCTCTCTGCTGATTGCCCGTTGCTGATGCATCCAGACTCGGAAA
CGATCCGCATTCTTGTCTCTACAGACAACCATGTCGGATACAATGAACGG
GATCCCATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGAGGTAATGTG
TCTGGCCAAGGAACAAGATGTGGACATGGTGCTTCTGGCAGGCGATCTCT
TCCACGAGAACAAGCCATCGCGCAAGTCCATGTACCAAGTTATGCGCTCC
ATTCGTATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGAGATGCTGAG
TGATGCGAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGAACTACGAGG
ATTTGGATATCAATGTGGCTATCCCCATCTTTTCAATTCACGGCAATCAC
GATGATCCGTCCGGAGAAGGACATCTGGCTGCATTGGACCTACTTCAGGT
GTCGGGGTTGATCAATTACTATGGACGGACCCCCGAGTCGGACAATATCC
AGATTAAACCGGTTTTGCTCCAGAAAGGACGCACGAAACTTGCTCTCTAC
GGTATGAGCAACGTCCGCGATGAGCGTCTATTTCGCACATTTCGAGACGG
CAAGGTCAAGTTCTACCAACCCTCAATCCAGAAAGAAGACTGGTTCAACT
TGATGTCTGTTCATCAGAACCATTATGCACACACTGAGACAGGCTATTTG
CCCGAGAATTTCCTACCCGAATTCCTGGACCTCGTCGTCTGGGGCCACGA
ACACGAGTGTTTAATCAACCCACGATTGAACCCCGAGACCAAGTTTCACG
TCATGCAGCCCGGCTCATCCGTGGCGACATCCCTGGTTCCTGGCGAATCA
GTGGCCAAACATGTAGCCATCCTCAGTATCACAGGCCGGGAGTTCAAATG
CGAGCCCATCCGTCTCAAGTCCGTCCGCCCATTCGCCATGCGCGAAATCA
TTCTCTCCGAAGAAAAAGGCGCGCAAAAGCTTGCCCGCAAGGACAACAAC
CGCACGGAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGAACTGATCGA
AGAAGCGAAAACGGAATGGCTAGAAATGCAAGATGAGACAGCAGAAGACG
AAGAGCTAGAAGTCCCACTACCACTAGTGCGACTGCGCGTTGAAACCTCA
ACGCCAGAAGGAGGCAGTTATGACTGTGAGAACCCGCAGCGATTCTCCAA
CCGCTTCGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCCAGTTCTACC
GCAAGAAGAAAAACACCAACAGTACGCGCAAACCGGGTGAAACCGACCTC
GACGAGACGGCAGTCTCACACCTCTCCACCCTCGACACCGTCAAAGTCGA
ACAATTAGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCATCCTCCCAC
AGAACTCCTTCGGCGACGCAGTCGCCCAATTCATCGACAAAGACGACAAA
CATGCCTTGGAAATGTTCGTCAACGAATCACTCGAGAGCCAAATGAAGCA
CTTACTGGCCCTAGATCGCGACCACGATCTAGAGGAAGAAGAAGAAATTG
CAGAAAGCTCCCTACAAAAAGCCATGGAGAGATATCGCACTCAAATGGAA
GACATGTTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAAGAAGCGCTT
CAAGCCCAAGCCCGACGGCTGGGACACCGAATTCGACGGTGTCTGGGAGG
ACCAACCCGGCGCTCTCATCCACTCCGACAACGAGGACGGCGATCCCAAT
GAAGACGTAGCCGGCGAGGATGGCGCCGAACCACCCACCACATCACGAGC
AACATCATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTAGAGCCACCA
CCACTGCCGCTACAACCCGCAAAACCGCCACCACAAAAGCAGCACCTGCT
ACTACTACTTCAAAGAAAACCACAACCTCTACTAAAAGCCGTAAACGCCG
CACCGTCTCCGACGAAGAAGATGAACAAGAGGATGTCATAATGCTCGACG
ATGACGATGATGACGACGACGACAACGCAGCCACCTCCCTCCCCAACATA
GACGAAGAGGACGATGATGACGATGACTCCCTCTTCGTCAAACAACCCGC
CAAATCTACTACCAGTACTAGATCTCGCAGAACAACAACAGCAGCAACAG
CGAAAGCAACAACACAACGCCGCAAAGCTCCATCTCCAGCACCTTCATCC
AATACAGTTGGAGGAACCGGACAAGCTACGCGAAGAACTCGGGGCAAGCA
AGCAACCCAGACAACGCTGAATTTTGTAGGCTCGCAAAGTAGTGTGCGAG
GGACGGCGGGGTCTGGGAGATCAATGAGGGCTACGAGGGCGGCGAGTGAG
GATATTGAGGATGATAGTGATGCGTTTGAGCCGATGGCTAGTAGTGCGAG
GCGCAGATGA
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Coding sequence (CDS) from alignment at ch8:3433460..3436169-

>KJC3_012391-T1 ID=KJC3_012391-T1|Name=KJC3_012391-T1|organism=Aspergillus niger KJC3|type=CDS|length=4770bp|location=Sequence derived from alignment at ch8:3433460..3436169- (Aspergillus niger KJC3)
ACTCGGAAACGATCCGCATTCTTGTCTCTACAGACAACCATGTCGGATAC
AATGAACGGGATCCCATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGA
GGTAATGTGTCTGGCCAAGGAACAAGATGTGGACATGGTGCTTCTGGCAG
GCGATCTCTTCCACGAGAACAAGCCATCGCGCAAGTCCATGTACCAAGTT
ATGCGCTCCATTCGTATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGA
GATGCTGAGTGATGCGAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGA
ACTACGAGGATTTGGATATCAATGTGGCTATCCCCATCTTTTCAATTCAC
GGCAATCACGATGATCCGTCCGGAGAAGGACATCTGGCTGCATTGGACCT
ACTTCAGGTGTCGGGGTTGATCAATTACTATGGACGGACCCCCGAGTCGG
ACAATATCCAGATTAAACCGGTTTTGCTCCAGAAAGGACGCACGAAACTT
GCTCTCTACGGTATGAGCAACGTCCGCGATGAGCGTCTATTTCGCACATT
TCGAGACGGCAAGGTCAAGTTCTACCAACCCTCAATCCAGAAAGAAGACT
GGTTCAACTTGATGTCTGTTCATCAGAACCATTATGCACACACTGAGACA
GGCTATTTGCCCGAGAATTTCCTACCCGAATTCCTGGACCTCGTCGTCTG
GGGCCACGAACACGAGTGTTTAATCAACCCACGATTGAACCCCGAGACCA
AGTTTCACGTCATGCAGCCCGGCTCATCCGTGGCGACATCCCTGGTTCCT
GGCGAATCAGTGGCCAAACATGTAGCCATCCTCAGTATCACAGGCCGGGA
GTTCAAATGCGAGCCCATCCGTCTCAAGTCCGTCCGCCCATTCGCCATGC
GCGAAATCATTCTCTCCGAAGAAAAAGGCGCGCAAAAGCTTGCCCGCAAG
GACAACAACCGCACGGAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGA
ACTGATCGAAGAAGCGAAAACGGAATGGCTAGAAATGCAAGATGAGACAG
CAGAAGACGAAGAGCTAGAAGTCCCACTACCACTAGTGCGACTGCGCGTT
GAAACCTCAACGCCAGAAGGAGGCAGTTATGACTGTGAGAACCCGCAGCG
ATTCTCCAACCGCTTCGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCC
AGTTCTACCGCAAGAAGAAAAACACCAACAGTACGCGCAAACCGGGTGAA
ACCGACCTCGACGAGACGGCAGTCTCACACCTCTCCACCCTCGACACCGT
CAAAGTCGAACAATTAGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCA
TCCTCCCACAGAACTCCTTCGGCGACGCAGTCGCCCAATTCATCGACAAA
GACGACAAACATGCCTTGGAAATGTTCGTCAACGAATCACTCGAGAGCCA
AATGAAGCACTTACTGGCCCTAGATCGCGACCACGATCTAGAGGAAGAAG
AAGAAATTGCAGAAAGCTCCCTACAAAAAGCCATGGAGAGATATCGCACT
CAAATGGAAGACATGTTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAA
GAAGCGCTTCAAGCCCAAGCCCGACGGCTGGGACACCGAATTCGACGGTG
TCTGGGAGGACCAACCCGGCGCTCTCATCCACTCCGACAACGAGGACGGC
GATCCCAATGAAGACGTAGCCGGCGAGGATGGCGCCGAACCACCCACCAC
ATCACGAGCAACATCATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTA
GAGCCACCACCACTGCCGCTACAACCCGCAAAACCGCCACCACAAAAGCA
GCACCTGCTACTACTACTTCAAAGAAAACCACAACCTCTACTAAAAGCCG
TAAACGCCGCACCGTCTCCGACGAAGAAGATGAACAAGAGGATGTCATAA
TGCTCGACGATGACGATGATGACGACGACGACAACGCAGCCACCTCCCTC
CCCAACATAGACGAAGAGGACGATGATGACGATGACTCCCTCTTCGTCAA
ACAACCCGCCAAATCTACTACCAGTACTAGATCTCGCAGAACAACAACAG
CAGCAACAGCGAAAGCAACAACACAACGCCGCAAAGCTCCATCTCCAGCA
CCTTCATCCAATACAGTTGGAGGAACCGGACAAGCTACGCGAAGAACTCG
GGGCAAGCAAGCAACCCAGACAACGCTGAATTTTGTAGGCTCGCAAAGTA
GTGTGCGAGGGACGGCGGGGTCTGGGAGATCAATGAGGGCTACGAGGGCG
GCGAGTGAGGATATTGAGGATGATAGTGATGCGTTTGAGCCGATGGCTAG
TAGTGCGAGGCGCAGATGAATGCCCAGATTAGATGACTCGGAAACGATCC
GCATTCTTGTCTCTACAGACAACCATGTCGGATACAATGAACGGGATCCC
ATCCGTGGTGATGACAGCTGGAAAAGCTTTCATGAGGTAATGTGTCTGGC
CAAGGAACAAGATGTGGACATGGTGCTTCTGGCAGGCGATCTCTTCCACG
AGAACAAGCCATCGCGCAAGTCCATGTACCAAGTTATGCGCTCCATTCGT
ATGAACTGTCTCGGCGATAAGCCTTGCGAACTGGAGATGCTGAGTGATGC
GAGCGAAAATTTTCAGGGTGCTTTCAATCACGTGAACTACGAGGATTTGG
ATATCAATGTGGCTATCCCCATCTTTTCAATTCACGGCAATCACGATGAT
CCGTCCGGAGAAGGACATCTGGCTGCATTGGACCTACTTCAGGTGTCGGG
GTTGATCAATTACTATGGACGGACCCCCGAGTCGGACAATATCCAGATTA
AACCGGTTTTGCTCCAGAAAGGACGCACGAAACTTGCTCTCTACGGTATG
AGCAACGTCCGCGATGAGCGTCTATTTCGCACATTTCGAGACGGCAAGGT
CAAGTTCTACCAACCCTCAATCCAGAAAGAAGACTGGTTCAACTTGATGT
CTGTTCATCAGAACCATTATGCACACACTGAGACAGGCTATTTGCCCGAG
AATTTCCTACCCGAATTCCTGGACCTCGTCGTCTGGGGCCACGAACACGA
GTGTTTAATCAACCCACGATTGAACCCCGAGACCAAGTTTCACGTCATGC
AGCCCGGCTCATCCGTGGCGACATCCCTGGTTCCTGGCGAATCAGTGGCC
AAACATGTAGCCATCCTCAGTATCACAGGCCGGGAGTTCAAATGCGAGCC
CATCCGTCTCAAGTCCGTCCGCCCATTCGCCATGCGCGAAATCATTCTCT
CCGAAGAAAAAGGCGCGCAAAAGCTTGCCCGCAAGGACAACAACCGCACG
GAAGTGACTCGCCTTCTCATGGAGATTGTCGAGGAACTGATCGAAGAAGC
GAAAACGGAATGGCTAGAAATGCAAGATGAGACAGCAGAAGACGAAGAGC
TAGAAGTCCCACTACCACTAGTGCGACTGCGCGTTGAAACCTCAACGCCA
GAAGGAGGCAGTTATGACTGTGAGAACCCGCAGCGATTCTCCAACCGCTT
CGTAGGCAAGGTCGCCAATGTGAACGATGTCGTCCAGTTCTACCGCAAGA
AGAAAAACACCAACAGTACGCGCAAACCGGGTGAAACCGACCTCGACGAG
ACGGCAGTCTCACACCTCTCCACCCTCGACACCGTCAAAGTCGAACAATT
AGTGCGCGACTTCCTCTCCGCACAGTCTCTGACCATCCTCCCACAGAACT
CCTTCGGCGACGCAGTCGCCCAATTCATCGACAAAGACGACAAACATGCC
TTGGAAATGTTCGTCAACGAATCACTCGAGAGCCAAATGAAGCACTTACT
GGCCCTAGATCGCGACCACGATCTAGAGGAAGAAGAAGAAATTGCAGAAA
GCTCCCTACAAAAAGCCATGGAGAGATATCGCACTCAAATGGAAGACATG
TTCTCCCGCGGTATCAAGAAACGCACCCGCGGCAAGAAGCGCTTCAAGCC
CAAGCCCGACGGCTGGGACACCGAATTCGACGGTGTCTGGGAGGACCAAC
CCGGCGCTCTCATCCACTCCGACAACGAGGACGGCGATCCCAATGAAGAC
GTAGCCGGCGAGGATGGCGCCGAACCACCCACCACATCACGAGCAACATC
ATCCACACGCGGCCGCGGCCGAGGCCGTGGCGGTAGAGCCACCACCACTG
CCGCTACAACCCGCAAAACCGCCACCACAAAAGCAGCACCTGCTACTACT
ACTTCAAAGAAAACCACAACCTCTACTAAAAGCCGTAAACGCCGCACCGT
CTCCGACGAAGAAGATGAACAAGAGGATGTCATAATGCTCGACGATGACG
ATGATGACGACGACGACAACGCAGCCACCTCCCTCCCCAACATAGACGAA
GAGGACGATGATGACGATGACTCCCTCTTCGTCAAACAACCCGCCAAATC
TACTACCAGTACTAGATCTCGCAGAACAACAACAGCAGCAACAGCGAAAG
CAACAACACAACGCCGCAAAGCTCCATCTCCAGCACCTTCATCCAATACA
GTTGGAGGAACCGGACAAGCTACGCGAAGAACTCGGGGCAAGCAAGCAAC
CCAGACAACGCTGAATTTTGTAGGCTCGCAAAGTAGTGTGCGAGGGACGG
CGGGGTCTGGGAGATCAATGAGGGCTACGAGGGCGGCGAGTGAGGATATT
GAGGATGATAGTGATGCGTTTGAGCCGATGGCTAGTAGTGCGAGGCGCAG
ATGAATGCCCAGATTAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030870Mre11 complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006302double-strand break repair
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:00084083'-5' exonuclease activity
GO:0030145manganese ion binding
GO:0004519endonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS23KJC3_012391Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012391-T1KJC3_012391-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012391-T1.cdsKJC3_012391-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012391-T1.exon2KJC3_012391-T1.exon2Aspergillus niger KJC3exon
KJC3_012391-T1.exon1KJC3_012391-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012391-T1.utr5p1KJC3_012391-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262GVX
DBxrefInterPro:IPR041796
DBxrefInterPro:IPR029052
DBxrefInterPro:IPR038487
DBxrefInterPro:IPR004843
DBxrefInterPro:IPR003701
DBxrefInterPro:IPR007281
DBxrefPFAM:PF04152
DBxrefPFAM:PF00149
ProductDouble-strand break repair protein mus-23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3433460..3436169 -
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