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KJC3_012406-T1, KJC3_012406-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012406-T1
Unique NameKJC3_012406-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3478736..3479949+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012406-T1 ID=KJC3_012406-T1|Name=KJC3_012406-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1214bp|location=Sequence derived from alignment at ch8:3478736..3479949+ (Aspergillus niger KJC3)
CATTAATCCCTCCTCCACAGCCCAAGGCAGGGGCCCGGACTCGCCTAGAT
CGATCTTACACTTTTCTCCGTCTTGTATAGCGAACTGAGTACATAATCGC
GTTATCTAGCCATCATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTG
CTCTAGTACGTGATTCAAACAGCAGCTGGAGACAGCACACCGCGACATCT
ATCTTCTCCCTCAAATAGCATCTCCAACTAACCACTCACCCATATCTACA
GTTCCTGCATCGCCCACCGCACAACCATTCTCGCCGAACACTCCTCCCCA
GGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAA
GATCAGCCACGACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCT
TCGTACACTACATTGCCGACTCGCCCACAACACCCAGCACCTCCGACGAC
CCCCGCCAGGGCGAACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGT
CGCAACCGCCGAACAAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAA
TCAAGCGCAAGTTCCTCTCTACTTACTCACCCTCCAGCACGGACTTCTCT
GCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCT
GCTGCAAACGTACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAA
GACGGGAAATCGATAGCGTGCGGAACATCATGACGGAGAATATTGAGAGA
GTGCTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGACAAGACGGATCG
GTTGGGTGGGAGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGA
GACGTATGTGGTGGAAGAATATCAAGTTGATGGTTTTGTTGGCTGTTGTG
GTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGTGGGTTGCCCGC
TTGGGGGAAGTGTGTTGGGCAGAGTCAGTAAGTAAATGGTGGTGGAAATA
TGGTTTGATGCGATGCGATGGTGTATCTTATTTTTGTCTTCGTGGTGATT
ATGAGGTGGAGGAACGGCTTACGATTGTCTGGTTTTCGGCCAATTGAGCG
GGACATATGCCTTTCTGTTTGTTTGTATGATATGATGACTGCGGCTGGTA
TTCATACTTTTAGGTATCTATATTTACTCCTGGGGTATCCCAATGTGATA
ACGTCTAGCGTGTC
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Coding sequence (CDS) from alignment at ch8:3478736..3479949+

>KJC3_012406-T1 ID=KJC3_012406-T1|Name=KJC3_012406-T1|organism=Aspergillus niger KJC3|type=CDS|length=1542bp|location=Sequence derived from alignment at ch8:3478736..3479949+ (Aspergillus niger KJC3)
ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTATTCCTGCAT
CGCCCACCGCACAACCATTCTCGCCGAACACTCCTCCCCAGGCACATCCT
CGACCGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAAGATCAGCCAC
GACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTA
CATTGCCGACTCGCCCACAACACCCAGCACCTCCGACGACCCCCGCCAGG
GCGAACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGTCGCAACCGCC
GAACAAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAATCAAGCGCAA
GTTCCTCTCTACTTACTCACCCTCCAGCACGGACTTCTCTGCTCTCCCGG
CTTACGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCTGCTGCAAACG
TACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAAT
CGATAGCGTGCGGAACATCATGACGGAGAATATTGAGAGAGTGCTGGAGA
GGGGAGAGCGGATTGATCTCCTGGTGGACAAGACGGATCGGTTGGGTGGG
AGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTG
GTGGAAGAATATCAAGTTGATGGTTTTGTTGGCTGTTGTGGTTGTGTTCT
TGGTGTATTTGTTTGTGGGGATGGGGTGTGGGTTGCCCGCTTGGGGGAAG
TGTGTTGGGCAGAGTCAGTAAATGGCCGCCTCCTCATCGAAGCCATCGAG
CTTCCTGCTCTATTCCTGCATCGCCCACCGCACAACCATTCTCGCCGAAC
ACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATC
ATCCTCCCAAAGATCAGCCACGACCAACCGCAAAAGCTCACCTACACCCA
CGAGCGTCTCTTCGTACACTACATTGCCGACTCGCCCACAACACCCAGCA
CCTCCGACGACCCCCGCCAGGGCGAACCCAACTCCTATGCGCCCCTCAGC
TACATCGTCGTCGCAACCGCCGAACAAGGCCGCCGTATTCCTTTCGCCTT
CCTCCTCGAAATCAAGCGCAAGTTCCTCTCTACTTACTCACCCTCCAGCA
CGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAG
CTCCGCTCGCTGCTGCAAACGTACAATACGGCCCCGCCGGCGGATTCGCT
GGCCTCGGCAAGACGGGAAATCGATAGCGTGCGGAACATCATGACGGAGA
ATATTGAGAGAGTGCTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGAC
AAGACGGATCGGTTGGGTGGGAGTGCGCATGATTTTCGCATTAGGAGTCG
TGGCTTGAGGAGACGTATGTGGTGGAAGAATATCAAGTTGATGGTTTTGT
TGGCTGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGT
GGGTTGCCCGCTTGGGGGAAGTGTGTTGGGCAGAGTCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012406KJC3_012406Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012406-T1.utr5p1KJC3_012406-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012406-T1.exon1KJC3_012406-T1.exon1Aspergillus niger KJC3exon
KJC3_012406-T1.exon2KJC3_012406-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012406-T1.cdsKJC3_012406-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012406-T1.utr3p1KJC3_012406-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012406-T1KJC3_012406-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR042855
DBxrefInterPro:IPR010908
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
DBxrefPFAM:PF13774
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3478736..3479949 +
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