You are here

Home

KJC3_012408-T1, KJC3_012408-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012408-T1
Unique NameKJC3_012408-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3484132..3484314-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012408-T1 ID=KJC3_012408-T1|Name=KJC3_012408-T1|organism=Aspergillus niger KJC3|type=mRNA|length=183bp|location=Sequence derived from alignment at ch8:3484132..3484314- (Aspergillus niger KJC3)
ATGATCACCGACGACGAACTCCACCGTCTGGCCGTCTTCCTCGGCTCCTG
CGCCATGATGATGATCGTTCTCTACCACTTCCTCGAAGTCAATGCGAAGG
ATGATGATGAAGAAGTCGATGTCAAAAACAATAACAGCAAGCAATCTACG
GGCGCGTCGTCGGCTGGTTCGACTACCGCATGA
back to top

Coding sequence (CDS) from alignment at ch8:3484132..3484314-

>KJC3_012408-T1 ID=KJC3_012408-T1|Name=KJC3_012408-T1|organism=Aspergillus niger KJC3|type=CDS|length=183bp|location=Sequence derived from alignment at ch8:3484132..3484314- (Aspergillus niger KJC3)
ATGATCACCGACGACGAACTCCACCGTCTGGCCGTCTTCCTCGGCTCCTG
CGCCATGATGATGATCGTTCTCTACCACTTCCTCGAAGTCAATGCGAAGG
ATGATGATGAAGAAGTCGATGTCAAAAACAATAACAGCAAGCAATCTACG
GGCGCGTCGTCGGCTGGTTCGACTACCGCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012408KJC3_012408Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012408-T1.cdsKJC3_012408-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012408-T1.exon1KJC3_012408-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012408-T1KJC3_012408-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036330
DBxrefInterPro:IPR018943
DBxrefPFAM:PF10215
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3484132..3484314 -
Powered by Drupal