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KJC3_012409-T1, KJC3_012409-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012409-T1
Unique NameKJC3_012409-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3484891..3487991+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012409-T1 ID=KJC3_012409-T1|Name=KJC3_012409-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3101bp|location=Sequence derived from alignment at ch8:3484891..3487991+ (Aspergillus niger KJC3)
CCAACTACTAACTCTCTATCTGAACTATCGATCAACTAGCTACACAATAC
TAACTTGGCCACCACTACTTGTCCAACCTCAAGAGGACCATTCCAAATCA
TTTTATCCTCTTCCGCTCCCCCCGACAACTGTTCGAGTCTTCCCTTTGTT
GCTGCCCGCCCTCTCTCTGTGTCACATTCGATCGCTGCAGCTCCACCCTC
ACCGGCCATTCCGAATCGTGAAGCGTGAATGGTGAGATGCTGCGGCGGCT
GTCGGTGGAGACTCGAGCTAAAGCAACGTCTGGCTGGTCTGATCGATCAT
CCTTCGGCCTGTCAAAAGGCAGAATAGGATTAGGAGCATAAAGGAAGCAG
CAGAAAAGTTGGTATGTCTCTTTTTTACCCCCTCTACTGCACTGGTCGTC
ATGCATGATTCGTGTCGCCGTTGTGTCTAGTGCTAGTTAATCAATATCCC
TTCCTGCCAGTCATCGTCTTGGAATCAATCAATTCGGCCTTCTCCGATTG
CATCCATCGTCTTGCTTTCCATCCCTGGTTCCTTTTTGTTCTATTTTCTG
CTTCTCCTTCATCTCCTTCTCCCCTTTCCCCCCACCCACCTCACTTCCCG
CCCGCTTTTTTTCTGTGCTTCCATAAAACCTTCCTTTCCGCCGTCACCCC
CGCTTGTACCGAACTTCCGCTGCCGTCTTTCTTTCTCTCTCTCTCCTTCT
CTCCTGCTGGGTTTCAATTTGTCTCTGATCACTCTGAACCCCGCCGGAGC
TTTCTTTTTTGCTTCCTTGTTCTCTTTCGCTCTGCATGGTGCTGGAATTG
CGCAAATGAGACCACCCGCTTATTAATTCTCAGTAACCATCAGTGATTGT
TCCGCCATCAGCATGGATCAAGGTATCCAACAAAACTCGTTCATTTCCGT
CAAGGACTCCGGTTCTGCCAAAAACTCGGGCCCGTCGCTGCTTGCCTGTC
TGCTGTGCCGACACAAGCACCTAAAATGTGATGGAAAAACTCCTGTCTGC
GGTCGTTGTTCCGCTACAGGATCTGAATGTCAATACACCCCGTCGCGTCG
CGGGTACAAGGGCCCCTCGAAGAAGCGTCGAGCCAATCCATCCTCCCCCG
ACCAACTCCCTGCCGACATGTCGACCTCGTTCGAGCCCCAATACTTCAAT
GTGCCGTCTGACTGGACTCTGGCGAGTAACATGCCCATGTCCTATGCGGT
GCCAGCCACCACTACCCCCGTGCCGACTTCCCTGCCCTCCTCTTCCTTGC
CGTCCGGCAGTCCCGCTCTGACAGATCATTCCGGCTCCTCGCACTCGCAG
CCGGTCGGCGTCTCCAATAGCCCCATGACTCCGGACTCGATCTCTACCAT
TGCCGGCGATGGCTATCTTATCGATATCTTCTATACCTACTTTCATCCTT
CCCACCCGGTCTTGCCGCCGCACCGTGTCCTTTACCGCAATCCCGTGCCT
GCGTTCCTGGAGCATGTCATCAAATTCATCGGGACCCACTTCACTCCGGC
CGCCAACAGTGAGAACTACAGGCCGTCGGTAATGTCCTCCGTGATGGACC
AGGAAGGGTCTATCGAGAAATTGCAGGCCCTGGTGCTTCTCGCCATTGTC
TTGCATTCCCGCAATGAGCGACAGAAGGCGGGCGAGTGCGTCACGACGGC
TGTTAATCTGGCCTTTGAGTTGAGATTGAACACGAGAGACGCTGCGCCAA
TGCTCAGCAATGGCGACCCGGTGCGGGAAGAGAGCTTGAGGCGTACCTGG
TGGGAGCTGTTCATTATTGAAGGCATGCTGACTGCGCTGGGTGTTCAGCC
AGCTTTTCGGTGCAATTCTGGGCCGCTCGAGGTACCATTGCCCTGTGAGG
AGCGTATCTACCAGGATGCCCTCCCGCCTCCGCCTGCGCCTACCGTTGCG
CAATTCGACGAGCGTGTCTTTGCAGACGAAGAGCGGGATTTCTCTTCCTT
CACTTACCGAATCGAGGCTGTTCGCATCCTGGGACGCGTAGTGTCCATCC
AAGACATGATTGAGGGCCAACAGGACCATGTCGAGGCCATTGACGCGCGG
ATTACCAGTTTCTTCCACCACCTGCCCGAGAACAAGGCCGAACTGCTGCG
CCCGGACGGGTCGGTCGACGAGATGATGTTCCAAGCGACAATGATTGTCA
ACGGCTCTGCAATTTACCTCCATTTCCCGAGATCTGACCTGCTGTCGTCC
CCAGCGGTGGCAGCGGAGGTTATCTGCGGCCATCACGGGCCGCTGAGCAT
CCCGGCCTTCTCGCATCATGCGCATGCCATGAAGGCGGTGAAGGCAGCCA
GCGAGATCTCCTCGCTGGCGTCTATCCGCATGCCAGTTGTGAAGCACACG
CCCTTCTTCATCTGTGCGCTGGTCCTCAGCTCCATGGTGCAGTTGGCTGC
ATGCTCTGTCAAAGCCGGGCAGATGCCCGACCCCAGCCGTGACCGGCTGA
CGCTTACCATTGGCGTTTTCAAGACCCTGGGACGGACCTGGGCGATTTCG
CAGACCATTATGCATCAGATCAAGGCCGTCGCCCGCGATGTGATGGACCT
TGGCCTTCGGCCTACCATGCCCGAGATTGATCTGACAACCGTCCTCGACA
ACAGTCGGTTTTGGATACCCGACCTCCTTCCGATGGCCAGGTAAAGAGGT
GGGGCTCCAATTTATATGCACATGAATTCCGGGTCGCTTATTGATCGACC
CTTGCACAAGCCCCTTCTTTTTTTTCCTGTCGATATTTACCTACCATGGC
AATGATACCCCTCCCCGACTGATAATGATTGCTTGTCCAAAAAGAAGACA
CTGAGATGATGCCAACGAGTTGATTTCATTGATCCGCTGGGGATCCCATG
CGCTTAGGGGGGTTATTATTCATTTATATGTTTCTTTTACCTGTTTCAAA
AATAAGAACAGCTATATTCTGCCCGTCTACCAACTATACTGGTTTGATCT
TTCCTGAAATGACTTAACGAAAGAAGTGCCTTGGCCGGTAGCTGTTTCAC
ATTAGCTTCTATTGTGATTTATGTACAAATGCCCAGGGTGATTGAATGAA
TAGTACTATGTTTCAGGAATATGTAGGAATCGATAGCCGTCAAGTTCTCG
C
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Coding sequence (CDS) from alignment at ch8:3484891..3487991+

>KJC3_012409-T1 ID=KJC3_012409-T1|Name=KJC3_012409-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch8:3484891..3487991+ (Aspergillus niger KJC3)
ATGGATCAAGGTATCCAACAAAACTCGTTCATTTCCGTCAAGGACTCCGG
TTCTGCCAAAAACTCGGGCCCGTCGCTGCTTGCCTGTCTGCTGTGCCGAC
ACAAGCACCTAAAATGTGATGGAAAAACTCCTGTCTGCGGTCGTTGTTCC
GCTACAGGATCTGAATGTCAATACACCCCGTCGCGTCGCGGGTACAAGGG
CCCCTCGAAGAAGCGTCGAGCCAATCCATCCTCCCCCGACCAACTCCCTG
CCGACATGTCGACCTCGTTCGAGCCCCAATACTTCAATGTGCCGTCTGAC
TGGACTCTGGCGAGTAACATGCCCATGTCCTATGCGGTGCCAGCCACCAC
TACCCCCGTGCCGACTTCCCTGCCCTCCTCTTCCTTGCCGTCCGGCAGTC
CCGCTCTGACAGATCATTCCGGCTCCTCGCACTCGCAGCCGGTCGGCGTC
TCCAATAGCCCCATGACTCCGGACTCGATCTCTACCATTGCCGGCGATGG
CTATCTTATCGATATCTTCTATACCTACTTTCATCCTTCCCACCCGGTCT
TGCCGCCGCACCGTGTCCTTTACCGCAATCCCGTGCCTGCGTTCCTGGAG
CATGTCATCAAATTCATCGGGACCCACTTCACTCCGGCCGCCAACAGTGA
GAACTACAGGCCGTCGGTAATGTCCTCCGTGATGGACCAGGAAGGGTCTA
TCGAGAAATTGCAGGCCCTGGTGCTTCTCGCCATTGTCTTGCATTCCCGC
AATGAGCGACAGAAGGCGGGCGAGTGCGTCACGACGGCTGTTAATCTGGC
CTTTGAGTTGAGATTGAACACGAGAGACGCTGCGCCAATGCTCAGCAATG
GCGACCCGGTGCGGGAAGAGAGCTTGAGGCGTACCTGGTGGGAGCTGTTC
ATTATTGAAGGCATGCTGACTGCGCTGGGTGTTCAGCCAGCTTTTCGGTG
CAATTCTGGGCCGCTCGAGGTACCATTGCCCTGTGAGGAGCGTATCTACC
AGGATGCCCTCCCGCCTCCGCCTGCGCCTACCGTTGCGCAATTCGACGAG
CGTGTCTTTGCAGACGAAGAGCGGGATTTCTCTTCCTTCACTTACCGAAT
CGAGGCTGTTCGCATCCTGGGACGCGTAGTGTCCATCCAAGACATGATTG
AGGGCCAACAGGACCATGTCGAGGCCATTGACGCGCGGATTACCAGTTTC
TTCCACCACCTGCCCGAGAACAAGGCCGAACTGCTGCGCCCGGACGGGTC
GGTCGACGAGATGATGTTCCAAGCGACAATGATTGTCAACGGCTCTGCAA
TTTACCTCCATTTCCCGAGATCTGACCTGCTGTCGTCCCCAGCGGTGGCA
GCGGAGGTTATCTGCGGCCATCACGGGCCGCTGAGCATCCCGGCCTTCTC
GCATCATGCGCATGCCATGAAGGCGGTGAAGGCAGCCAGCGAGATCTCCT
CGCTGGCGTCTATCCGCATGCCAGTTGTGAAGCACACGCCCTTCTTCATC
TGTGCGCTGGTCCTCAGCTCCATGGTGCAGTTGGCTGCATGCTCTGTCAA
AGCCGGGCAGATGCCCGACCCCAGCCGTGACCGGCTGACGCTTACCATTG
GCGTTTTCAAGACCCTGGGACGGACCTGGGCGATTTCGCAGACCATTATG
CATCAGATCAAGGCCGTCGCCCGCGATGTGATGGACCTTGGCCTTCGGCC
TACCATGCCCGAGATTGATCTGACAACCGTCCTCGACAACAGTCGGTTTT
GGATACCCGACCTCCTTCCGATGGCCAGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012409KJC3_012409Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012409-T1KJC3_012409-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012409-T1.utr5p1KJC3_012409-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012409-T1.utr5p2KJC3_012409-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012409-T1.exon1KJC3_012409-T1.exon1Aspergillus niger KJC3exon
KJC3_012409-T1.exon2KJC3_012409-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012409-T1.cdsKJC3_012409-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012409-T1.utr3p1KJC3_012409-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3484891..3487991 +
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