|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3513011..3515799+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012416-T1 ID=KJC3_012416-T1|Name=KJC3_012416-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2789bp|location=Sequence derived from alignment at ch8:3513011..3515799+ (Aspergillus niger KJC3)
CCCATATCTACCACCACAATCACAACATCCATCCATCTCACATCCACACA
CTCTCTCTTAGTCCCAAATGCTGTTCATTGAGGCTCTGGTGTACCGCGGT
ACCTGACTGGGTATTATTTTTGGCCTATGCATACTACTTCGCCGATATTG
AGGCAGTGTTGCCAACCGGCCTTTTCTGGCGACACGCACTGCAATGCTGC
TTCGCCAAGCTAGGTACCAGACTGTCGGGTCCTACTATTCCCGTTTCATT
AAGAGCAGGAGAGCAGGAGAAAAGGGAAAAAAAAGCGCGCTGCTCCAGCC
GACTGTTGCTGATCAGGAAGCCAGGCATTCCCCCCCGTCGATGTTGCCAA
TAATTCAGCCGCTATTGTTGCCCGTCTTTTCCCCAGCGCCATGCTTGTTG
TCCCAAGAGGCACTGCATCCCCTAACGTAACGGGGTCTCCTACACCCCCA
CTACACACTCACAATTACCACTACTATCTGGTTCCCTTCATTTTTTGTTT
ACTTTGTACCATTCAGATGTCCTGATTTCCTGGCTGATGGATCGGCTGGG
TCCCGGTCATGTCCGCTAGGCGACAAATGACGGCGTCGTCCGGTGTGAAT
CAAACCATGCTCCATCCACACCCACCCCCCTCCCTCCCACTCTCCCTCCC
TCCTCGCGACAGGGTACAGCGCCGACTGACACCTTGGCCTGATCACACCC
TTCCGGCGCTAAATTCTTGCGCATGGCATCTAATTGACGCGCCTATCTGA
ATAATGTTGCAGACCCAGGCTGCAGTCCACTTGGACCGGGTTGTTCCAGC
TAGGTTCGCTCTGAATTCTTCCCCATCCATGCAGCAACGTCCCGTCAATT
CTGCCTTGCCTGATGAGGCGTCAAACCTGTTGCTCATCTCTCTCTCTTCT
CTCTACCTGTGCCCCATGCAGCGGTTGCTGTACTCCAATCATCATATGGC
ATCCCCCGAGATATTTTTTTCAGCTGCTGTTCAGGGTTCGCCACTTATTC
TCAACGTCCAGCAGCGTCGCTGTTGAGTCTTGCTACTTATATACACTGCC
AATAACTTCCTCACTCTCGTTTGAATAGCATCTACTAGTCATCAATATTG
TTGCCTTCTCATCAGCCCTACCCCAGTTTCAGCCACAGACCTCGTGGGAG
TTCTGTGAACATAAAAGCAATCCCTCGACCCAAAAACCATCACGAATCAT
CCTTCTCCTGGTTGCAGCTTTCCCCGAGAATCTTCATTTTTCTTTCCCAA
TTCTGTTCTGTTTTATGATTAAATCTTAATTTCGTCATGGATCGTACACC
TACCTCGTTCCCATCCTCTCCAGTGGCTCACTCCGCGCGGGATGATCAAA
GGTTACTCAAAGCTTCTCCAGCCTACCCATCACCTGCGCCTATCCCGCTC
GATAGATACGATTTCCAGTCGTTGTCCGGGTTAGGAATCTCAAATTGTGG
AACAGGATCCCCCTCAAGCCAGATCAGACTCTACCCGTGTCCGGAGCAAT
ATGCACTTTCAACGAGCAACTGGTCCGACCCAATAACGCATTCCCCAAAC
ATCCTCGAAACCCCTCCAGACGCCAGTCGGTTCCCGCCCAGTACGCATTA
CGAGCCATTCGGTAGCCATGCAGATATCTCAGTATCACCCAGTTACAGCC
CAGTTATGGATTTTGGTGCGATGCATGATGAAATTCCTCGCTTCTGGCCT
AACACTCCTACCTCCGAAACCATGGCAGCGTCAGAAGGCTGGTCCAATGT
GGACGTCTGGGAATCATCTTTCCTGGATGATTCAACCAATACAATGGTCT
CCAGAATGCCAGAGATCCCTCGACTCCAACTCAACACCGCGTATCTGCAT
CCCCAACGACCGGATAATACCCTCACTGAGCTGGACCCGAGTCAAAGTGT
CGCGCCGGATTTGGTCCCTGATGAGGCAATCTCCAAGTGGATCGAAAATG
TTAGCGAATCGCCCCATGGAGAACAATCCAAGATACCGTCAGCAAGTGGC
TTAGAGTGTCCCACGTGTGGTGTCCGCTTCACACGACGCTCTAACTGTAA
AGAGCATATGAAGAGCCATGACCCTAACTACGTAAGGCCACATCCGTGCG
AGACCTGCGGGCGGGAGTTTAGGCGGAGAACTGATCTGAAGAGACACGTA
GATAGTGTAAGTGATTTTGAATAGAGTAAAGTTCATGGCTAATAGAACGC
ACAGATCCATCGGGGAATACGCAAGTATGGCTGTGAGAAGTGTGGTCGGC
GCTACAGTCGACAGGACACATTGTCAAGGTACCGTATTCGGATCAAGCTC
CAATGTGAAACAACGAACTCACTCTGCTACAGACATCAGTCGGACGGCTG
CGATGGAAGAACCCGGAAGACACGAGCTTCTCGAAACGACACAGATGCGC
CATACCCCACTGATGACTATTACGCTTCACCACACTAATCAACTGAGAGC
CCTTTGATGTTTTAGTTGCCTGCTCTAGACCATGCATGCGTTGACCGCAG
CTAGTCATGAACGTTACGGCTGCATACTTTGGGAGAGGATCCATTGTATA
TTTGAAAGCATGACTACCCATGTATTTTTTTGTGTTTTCTTTGTATAAGC
GCAGGGAGGCAGTTTGCTTTTGTTCTGACTGTTTGTTTTCTCATCTGGGA
GGCCATGTCGACTTTTGGTTTTGCATTTTTTGGAATATGGCTAGAGATCC
GTCATAGCCCGAAGGCGGCTTATAGAAATCAAGCAGCGCATGGCAGGTCC
ATGCCTTTCGTTTAACAAACTTTAGCCGCCACAACTGCC back to topCoding sequence (CDS) from alignment at ch8:3513011..3515799+ >KJC3_012416-T1 ID=KJC3_012416-T1|Name=KJC3_012416-T1|organism=Aspergillus niger KJC3|type=CDS|length=4140bp|location=Sequence derived from alignment at ch8:3513011..3515799+ (Aspergillus niger KJC3)
ATGTTGCAGACCCAGGCTGCAGTCCACTTGGACCGGGTTGTTCCAGCTAG
GTTACTCAAAGCTTCTCCAGCCTACCCATCACCTGCGCCTATCCCGCTCG
ATAGATACGATTTCCAGTCGTTGTCCGGGTTAGGAATCTCAAATTGTGGA
ACAGGATCCCCCTCAAGCCAGATCAGACTCTACCCGTGTCCGGAGCAATA
TGCACTTTCAACGAGCAACTGGTCCGACCCAATAACGCATTCCCCAAACA
TCCTCGAAACCCCTCCAGACGCCAGTCGGTTCCCGCCCAGTACGCATTAC
GAGCCATTCGGTAGCCATGCAGATATCTCAGTATCACCCAGTTACAGCCC
AGTTATGGATTTTGGTGCGATGCATGATGAAATTCCTCGCTTCTGGCCTA
ACACTCCTACCTCCGAAACCATGGCAGCGTCAGAAGGCTGGTCCAATGTG
GACGTCTGGGAATCATCTTTCCTGGATGATTCAACCAATACAATGGTCTC
CAGAATGCCAGAGATCCCTCGACTCCAACTCAACACCGCGTATCTGCATC
CCCAACGACCGGATAATACCCTCACTGAGCTGGACCCGAGTCAAAGTGTC
GCGCCGGATTTGGTCCCTGATGAGGCAATCTCCAAGTGGATCGAAAATGT
TAGCGAATCGCCCCATGGAGAACAATCCAAGATACCGTCAGCAAGTGGCT
TAGAGTGTCCCACGTGTGGTGTCCGCTTCACACGACGCTCTAACTGTAAA
GAGCATATGAAGAGCCATGACCCTAACTACGTAAGGCCACATCCGTGCGA
GACCTGCGGGCGGGAGTTTAGGCGGAGAACTGATCTGAAGAGACACGTAG
ATAGTATCCATCGGGGAATACGCAAGTATGGCTGTGAGAAGTGTGGTCGG
CGCTACAGTCGACAGGACACATTGTCAAGACATCAGTCGGACGGCTGCGA
TGGAAGAACCCGGAAGACACGAGCTTCTCGAAACGACACAGATGCGCCAT
ACCCCACTGATGACTATTACGCTTCACCACACTAAATGTTGCAGACCCAG
GCTGCAGTCCACTTGGACCGGGTTGTTCCAGCTAGGTTACTCAAAGCTTC
TCCAGCCTACCCATCACCTGCGCCTATCCCGCTCGATAGATACGATTTCC
AGTCGTTGTCCGGGTTAGGAATCTCAAATTGTGGAACAGGATCCCCCTCA
AGCCAGATCAGACTCTACCCGTGTCCGGAGCAATATGCACTTTCAACGAG
CAACTGGTCCGACCCAATAACGCATTCCCCAAACATCCTCGAAACCCCTC
CAGACGCCAGTCGGTTCCCGCCCAGTACGCATTACGAGCCATTCGGTAGC
CATGCAGATATCTCAGTATCACCCAGTTACAGCCCAGTTATGGATTTTGG
TGCGATGCATGATGAAATTCCTCGCTTCTGGCCTAACACTCCTACCTCCG
AAACCATGGCAGCGTCAGAAGGCTGGTCCAATGTGGACGTCTGGGAATCA
TCTTTCCTGGATGATTCAACCAATACAATGGTCTCCAGAATGCCAGAGAT
CCCTCGACTCCAACTCAACACCGCGTATCTGCATCCCCAACGACCGGATA
ATACCCTCACTGAGCTGGACCCGAGTCAAAGTGTCGCGCCGGATTTGGTC
CCTGATGAGGCAATCTCCAAGTGGATCGAAAATGTTAGCGAATCGCCCCA
TGGAGAACAATCCAAGATACCGTCAGCAAGTGGCTTAGAGTGTCCCACGT
GTGGTGTCCGCTTCACACGACGCTCTAACTGTAAAGAGCATATGAAGAGC
CATGACCCTAACTACGTAAGGCCACATCCGTGCGAGACCTGCGGGCGGGA
GTTTAGGCGGAGAACTGATCTGAAGAGACACGTAGATAGTATCCATCGGG
GAATACGCAAGTATGGCTGTGAGAAGTGTGGTCGGCGCTACAGTCGACAG
GACACATTGTCAAGACATCAGTCGGACGGCTGCGATGGAAGAACCCGGAA
GACACGAGCTTCTCGAAACGACACAGATGCGCCATACCCCACTGATGACT
ATTACGCTTCACCACACTAAATGTTGCAGACCCAGGCTGCAGTCCACTTG
GACCGGGTTGTTCCAGCTAGGTTACTCAAAGCTTCTCCAGCCTACCCATC
ACCTGCGCCTATCCCGCTCGATAGATACGATTTCCAGTCGTTGTCCGGGT
TAGGAATCTCAAATTGTGGAACAGGATCCCCCTCAAGCCAGATCAGACTC
TACCCGTGTCCGGAGCAATATGCACTTTCAACGAGCAACTGGTCCGACCC
AATAACGCATTCCCCAAACATCCTCGAAACCCCTCCAGACGCCAGTCGGT
TCCCGCCCAGTACGCATTACGAGCCATTCGGTAGCCATGCAGATATCTCA
GTATCACCCAGTTACAGCCCAGTTATGGATTTTGGTGCGATGCATGATGA
AATTCCTCGCTTCTGGCCTAACACTCCTACCTCCGAAACCATGGCAGCGT
CAGAAGGCTGGTCCAATGTGGACGTCTGGGAATCATCTTTCCTGGATGAT
TCAACCAATACAATGGTCTCCAGAATGCCAGAGATCCCTCGACTCCAACT
CAACACCGCGTATCTGCATCCCCAACGACCGGATAATACCCTCACTGAGC
TGGACCCGAGTCAAAGTGTCGCGCCGGATTTGGTCCCTGATGAGGCAATC
TCCAAGTGGATCGAAAATGTTAGCGAATCGCCCCATGGAGAACAATCCAA
GATACCGTCAGCAAGTGGCTTAGAGTGTCCCACGTGTGGTGTCCGCTTCA
CACGACGCTCTAACTGTAAAGAGCATATGAAGAGCCATGACCCTAACTAC
GTAAGGCCACATCCGTGCGAGACCTGCGGGCGGGAGTTTAGGCGGAGAAC
TGATCTGAAGAGACACGTAGATAGTATCCATCGGGGAATACGCAAGTATG
GCTGTGAGAAGTGTGGTCGGCGCTACAGTCGACAGGACACATTGTCAAGA
CATCAGTCGGACGGCTGCGATGGAAGAACCCGGAAGACACGAGCTTCTCG
AAACGACACAGATGCGCCATACCCCACTGATGACTATTACGCTTCACCAC
ACTAAATGTTGCAGACCCAGGCTGCAGTCCACTTGGACCGGGTTGTTCCA
GCTAGGTTACTCAAAGCTTCTCCAGCCTACCCATCACCTGCGCCTATCCC
GCTCGATAGATACGATTTCCAGTCGTTGTCCGGGTTAGGAATCTCAAATT
GTGGAACAGGATCCCCCTCAAGCCAGATCAGACTCTACCCGTGTCCGGAG
CAATATGCACTTTCAACGAGCAACTGGTCCGACCCAATAACGCATTCCCC
AAACATCCTCGAAACCCCTCCAGACGCCAGTCGGTTCCCGCCCAGTACGC
ATTACGAGCCATTCGGTAGCCATGCAGATATCTCAGTATCACCCAGTTAC
AGCCCAGTTATGGATTTTGGTGCGATGCATGATGAAATTCCTCGCTTCTG
GCCTAACACTCCTACCTCCGAAACCATGGCAGCGTCAGAAGGCTGGTCCA
ATGTGGACGTCTGGGAATCATCTTTCCTGGATGATTCAACCAATACAATG
GTCTCCAGAATGCCAGAGATCCCTCGACTCCAACTCAACACCGCGTATCT
GCATCCCCAACGACCGGATAATACCCTCACTGAGCTGGACCCGAGTCAAA
GTGTCGCGCCGGATTTGGTCCCTGATGAGGCAATCTCCAAGTGGATCGAA
AATGTTAGCGAATCGCCCCATGGAGAACAATCCAAGATACCGTCAGCAAG
TGGCTTAGAGTGTCCCACGTGTGGTGTCCGCTTCACACGACGCTCTAACT
GTAAAGAGCATATGAAGAGCCATGACCCTAACTACGTAAGGCCACATCCG
TGCGAGACCTGCGGGCGGGAGTTTAGGCGGAGAACTGATCTGAAGAGACA
CGTAGATAGTATCCATCGGGGAATACGCAAGTATGGCTGTGAGAAGTGTG
GTCGGCGCTACAGTCGACAGGACACATTGTCAAGACATCAGTCGGACGGC
TGCGATGGAAGAACCCGGAAGACACGAGCTTCTCGAAACGACACAGATGC
GCCATACCCCACTGATGACTATTACGCTTCACCACACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012416-T1.utr5p1 | KJC3_012416-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012416-T1.utr3p1 | KJC3_012416-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF12874 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3513011..3515799 + |
|
