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KJC3_012417-T1, KJC3_012417-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012417-T1
Unique NameKJC3_012417-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3518381..3519473+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012417-T1 ID=KJC3_012417-T1|Name=KJC3_012417-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1093bp|location=Sequence derived from alignment at ch8:3518381..3519473+ (Aspergillus niger KJC3)
ATGAGTGCCACCACTACCGTCACCGAGCCGCCGAGAATCACGGCTGAGAA
CGTCGCGACTCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGGGAGGTGC
TCCCCACTGCGACAAGCAATGCCTCCGCCCCCGGCGACGAGCTTGCCGGT
TATGATGAGGAACAGGTCCGCCTGATGGAAGAGGTGTGTATTGTGCTGGA
TGAAGATGACAAGCCCATTGGCAGTGCCAGCAAGAAGGCCTGTAAGTTTA
TCGATCGTCACCAAGCATGGAGAACCTAATCAATGCTGATGGCGCGACTC
CACAGGCCACTTGATGACCAACATTGATCGCGGCCTCCTCCACCGTGCTT
TCTCCGTATTCCTTTTCGACTCGAACAAGCGTCTGCTGCTTCAACAACGT
GCGACCGAGAAGATCACCTTCCCCGACATGTGGACGAACACCTGCTGCTC
CCATCCCCTGGGCATCCCTGGGGAGACGGGCTCGCAGCTCGATGCGGCCG
TGCTGGGTGTGAAGCGCGCGGCGCAGCGCAAGCTGGAACACGAGCTGGGT
ATCAAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGCAT
CCACTACAAGGCGCCCAGTGATGGCAAATGGGGAGAGCACGAGAGTATGT
CTATAATTTACCAGTGGATGAGCTGTTGGATAGGTGACTGACCGTATCTA
GTTGACTACATTCTGTTCATCCAGGCGGACGTCGATTTGAATGTCAACCC
CAACGAAGTGCGCGACACGCGGTATGTGTCGGCGGACGAGCTGAAGCAGA
TGTTCGAGCAACCGGGACTGAAGTTCACGCCGTGGTTCAAGCTGATCTGC
AATTCAATGCTGTTCGAGTGGTGGAGCCATCTGGGCTCGGCGTCGCTTGA
GGGATACAAGAACGAGCAGCAGATCCGGAGGATGTAAATGAGGCGAAGAT
GATGTGTGTGATCTTTTGCATCTGCAGCCTGTACATGGTACCCCTACTTA
TATCCCCTGACATGATTCCCTGCAGCGTTTGATGGCCGTATCCATACTAT
CGATGTAGTGTCCATTTAGCTTTGTTTATAATCATATCTTACC
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Coding sequence (CDS) from alignment at ch8:3518381..3519473+

>KJC3_012417-T1 ID=KJC3_012417-T1|Name=KJC3_012417-T1|organism=Aspergillus niger KJC3|type=CDS|length=2448bp|location=Sequence derived from alignment at ch8:3518381..3519473+ (Aspergillus niger KJC3)
ATGAGTGCCACCACTACCGTCACCGAGCCGCCGAGAATCACGGCTGAGAA
CGTCGCGACTCTCTTCCCCGAGGTTGACACTTCTCTGGCGCGGGAGGTGC
TCCCCACTGCGACAAGCAATGCCTCCGCCCCCGGCGACGAGCTTGCCGGT
TATGATGAGGAACAGGTCCGCCTGATGGAAGAGGTGTGTATTGTGCTGGA
TGAAGATGACAAGCCCATTGGCAGTGCCAGCAAGAAGGCCTGCCACTTGA
TGACCAACATTGATCGCGGCCTCCTCCACCGTGCTTTCTCCGTATTCCTT
TTCGACTCGAACAAGCGTCTGCTGCTTCAACAACGTGCGACCGAGAAGAT
CACCTTCCCCGACATGTGGACGAACACCTGCTGCTCCCATCCCCTGGGCA
TCCCTGGGGAGACGGGCTCGCAGCTCGATGCGGCCGTGCTGGGTGTGAAG
CGCGCGGCGCAGCGCAAGCTGGAACACGAGCTGGGTATCAAACCGGAGCA
GGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGCATCCACTACAAGGCGC
CCAGTGATGGCAAATGGGGAGAGCACGAGATTGACTACATTCTGTTCATC
CAGGCGGACGTCGATTTGAATGTCAACCCCAACGAAGTGCGCGACACGCG
GTATGTGTCGGCGGACGAGCTGAAGCAGATGTTCGAGCAACCGGGACTGA
AGTTCACGCCGTGGTTCAAGCTGATCTGCAATTCAATGCTGTTCGAGTGG
TGGAGCCATCTGGGCTCGGCGTCGCTTGAGGGATACAAGAACGAGCAGCA
GATCCGGAGGATGTAAATGAGTGCCACCACTACCGTCACCGAGCCGCCGA
GAATCACGGCTGAGAACGTCGCGACTCTCTTCCCCGAGGTTGACACTTCT
CTGGCGCGGGAGGTGCTCCCCACTGCGACAAGCAATGCCTCCGCCCCCGG
CGACGAGCTTGCCGGTTATGATGAGGAACAGGTCCGCCTGATGGAAGAGG
TGTGTATTGTGCTGGATGAAGATGACAAGCCCATTGGCAGTGCCAGCAAG
AAGGCCTGCCACTTGATGACCAACATTGATCGCGGCCTCCTCCACCGTGC
TTTCTCCGTATTCCTTTTCGACTCGAACAAGCGTCTGCTGCTTCAACAAC
GTGCGACCGAGAAGATCACCTTCCCCGACATGTGGACGAACACCTGCTGC
TCCCATCCCCTGGGCATCCCTGGGGAGACGGGCTCGCAGCTCGATGCGGC
CGTGCTGGGTGTGAAGCGCGCGGCGCAGCGCAAGCTGGAACACGAGCTGG
GTATCAAACCGGAGCAGGTGCCGCTGGACAAGTTTGAGTTCTTCACCCGC
ATCCACTACAAGGCGCCCAGTGATGGCAAATGGGGAGAGCACGAGATTGA
CTACATTCTGTTCATCCAGGCGGACGTCGATTTGAATGTCAACCCCAACG
AAGTGCGCGACACGCGGTATGTGTCGGCGGACGAGCTGAAGCAGATGTTC
GAGCAACCGGGACTGAAGTTCACGCCGTGGTTCAAGCTGATCTGCAATTC
AATGCTGTTCGAGTGGTGGAGCCATCTGGGCTCGGCGTCGCTTGAGGGAT
ACAAGAACGAGCAGCAGATCCGGAGGATGTAAATGAGTGCCACCACTACC
GTCACCGAGCCGCCGAGAATCACGGCTGAGAACGTCGCGACTCTCTTCCC
CGAGGTTGACACTTCTCTGGCGCGGGAGGTGCTCCCCACTGCGACAAGCA
ATGCCTCCGCCCCCGGCGACGAGCTTGCCGGTTATGATGAGGAACAGGTC
CGCCTGATGGAAGAGGTGTGTATTGTGCTGGATGAAGATGACAAGCCCAT
TGGCAGTGCCAGCAAGAAGGCCTGCCACTTGATGACCAACATTGATCGCG
GCCTCCTCCACCGTGCTTTCTCCGTATTCCTTTTCGACTCGAACAAGCGT
CTGCTGCTTCAACAACGTGCGACCGAGAAGATCACCTTCCCCGACATGTG
GACGAACACCTGCTGCTCCCATCCCCTGGGCATCCCTGGGGAGACGGGCT
CGCAGCTCGATGCGGCCGTGCTGGGTGTGAAGCGCGCGGCGCAGCGCAAG
CTGGAACACGAGCTGGGTATCAAACCGGAGCAGGTGCCGCTGGACAAGTT
TGAGTTCTTCACCCGCATCCACTACAAGGCGCCCAGTGATGGCAAATGGG
GAGAGCACGAGATTGACTACATTCTGTTCATCCAGGCGGACGTCGATTTG
AATGTCAACCCCAACGAAGTGCGCGACACGCGGTATGTGTCGGCGGACGA
GCTGAAGCAGATGTTCGAGCAACCGGGACTGAAGTTCACGCCGTGGTTCA
AGCTGATCTGCAATTCAATGCTGTTCGAGTGGTGGAGCCATCTGGGCTCG
GCGTCGCTTGAGGGATACAAGAACGAGCAGCAGATCCGGAGGATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004452isopentenyl-diphosphate delta-isomerase activity
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDI1KJC3_012417Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012417-T1.exon1KJC3_012417-T1.exon1Aspergillus niger KJC3exon
KJC3_012417-T1.exon2KJC3_012417-T1.exon2Aspergillus niger KJC3exon
KJC3_012417-T1.exon3KJC3_012417-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012417-T1.cdsKJC3_012417-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012417-T1.utr3p1KJC3_012417-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012417-T1KJC3_012417-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926458I
DBxrefInterPro:IPR015797
DBxrefInterPro:IPR011876
DBxrefInterPro:IPR000086
DBxrefPFAM:PF00293
Productisopentenyl-diphosphate delta-isomerase idi1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3518381..3519473 +
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