|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3519513..3520205- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012418-T1 ID=KJC3_012418-T1|Name=KJC3_012418-T1|organism=Aspergillus niger KJC3|type=mRNA|length=693bp|location=Sequence derived from alignment at ch8:3519513..3520205- (Aspergillus niger KJC3)
TCTCCCCCTCCCACCCTCCCACACACACACACCACACTCAATCTACAGAA
GAAGAAGAAGAAGCAACAACCATGTCCACCACAACTCAACAACACCAAGA
ATCCCAAGAATCCCAAGAATACAACAACCACACCCTCCCCAAACCCCCCT
ACAACCCACTAATCAACCCCTCCAACACGCGCCCAATCCTGGCAGACGAG
TGAGCACCCACATCCCTCCCTTACCCCCCCTCCCATTGCATCGCAATACT
GACAAAAAAAATACAGTACCCTATCCCTCAAATCCCACATCTTCCTAACC
CGCCCCTACATATCGACCCTCCTATTCGAAAATGCCACCTCCGATGCCCG
CGACCACTGCGCCAACGAGCGCACCTTCCTCTCCTGGCTCCGTCTCTCAA
TGTACCTCGCCATCGTGGCCATCGCCATCATAATCAGTTTCCATTTCCAG
ACGCCGCCGACGGGATTGGAGCGGCGGATGGCATTACCGCTAGGGATTGT
GTTCTGGGTGCTGAGTTTGGCGTGTCTCGTGAATGGGTTTGCGAATTATG
TGCGGACCGTCAAGAAGTATAGCCGGAAGGCGGCGCTCGTGCAGAGTGGG
TGGAAGACGCAGGTTACGTTTACGGTGGTCGGGACGGTGATTTTGGGGAG
TTGTGTGTTGTTTTTGGCGACGGATGCTAGTACAACTAACTAA back to topCoding sequence (CDS) from alignment at ch8:3519513..3520205- >KJC3_012418-T1 ID=KJC3_012418-T1|Name=KJC3_012418-T1|organism=Aspergillus niger KJC3|type=CDS|length=1110bp|location=Sequence derived from alignment at ch8:3519513..3520205- (Aspergillus niger KJC3)
TACCCTATCCCTCAAATCCCACATCTTCCTAACCCGCCCCTACATATCGA
CCCTCCTATTCGAAAATGCCACCTCCGATGCCCGCGACCACTGCGCCAAC
GAGCGCACCTTCCTCTCCTGGCTCCGTCTCTCAATGTACCTCGCCATCGT
GGCCATCGCCATCATAATCAGTTTCCATTTCCAGACGCCGCCGACGGGAT
TGGAGCGGCGGATGGCATTACCGCTAGGGATTGTGTTCTGGGTGCTGAGT
TTGGCGTGTCTCGTGAATGGGTTTGCGAATTATGTGCGGACCGTCAAGAA
GTATAGCCGGAAGGCGGCGCTCGTGCAGAGTGGGTGGAAGACGCAGGTTA
CGTTTACGGTGGTCGGGACGGTGATTTTGGGGAGTTGTGTGTTGTTTTTG
GCGACGGATGCTAGTACAACTAACTAAATGTCCACCACAACTCAACAACA
CCAAGAATCCCAAGAATCCCAAGAATACAACAACCACACCCTCCCCAAAC
CCCCCTACAACCCACTAATCAACCCCTCCAACACGCGCCCAATCCTGGCA
GACGATACCCTATCCCTCAAATCCCACATCTTCCTAACCCGCCCCTACAT
ATCGACCCTCCTATTCGAAAATGCCACCTCCGATGCCCGCGACCACTGCG
CCAACGAGCGCACCTTCCTCTCCTGGCTCCGTCTCTCAATGTACCTCGCC
ATCGTGGCCATCGCCATCATAATCAGTTTCCATTTCCAGACGCCGCCGAC
GGGATTGGAGCGGCGGATGGCATTACCGCTAGGGATTGTGTTCTGGGTGC
TGAGTTTGGCGTGTCTCGTGAATGGGTTTGCGAATTATGTGCGGACCGTC
AAGAAGTATAGCCGGAAGGCGGCGCTCGTGCAGAGTGGGTGGAAGACGCA
GGTTACGTTTACGGTGGTCGGGACGGTGATTTTGGGGAGTTGTGTGTTGT
TTTTGGCGACGGATGCTAGTACAACTAACTAAATGTCCACCACAACTCAA
CAACACCAAGAATCCCAAGAATCCCAAGAATACAACAACCACACCCTCCC
CAAACCCCCCTACAACCCACTAATCAACCCCTCCAACACGCGCCCAATCC
TGGCAGACGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012418-T1.utr5p1 | KJC3_012418-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003807 |
| DBxref | PFAM:PF02656 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3519513..3520205 - |
|
