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KJC3_012425-T1, KJC3_012425-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012425-T1
Unique NameKJC3_012425-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3539507..3542384+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012425-T1 ID=KJC3_012425-T1|Name=KJC3_012425-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2878bp|location=Sequence derived from alignment at ch8:3539507..3542384+ (Aspergillus niger KJC3)
TGCTGCTTCTTGTCTGGCTGCTGCCTTTTTGCTTTCCTGAATTATTGCTT
TTTCGCCCATGACCATTCCGTGCATTTTCCCTGGCCCCAGTGATCGCCCA
CCATGCTGCAATAAATCATCCCAGGATGGGGACCATCGAAGCTATGGAAA
ACTGCTGTCACGATCTGGCTTCCCTCTGCTGATCGACGCATCCTAGTTTC
TGACTCCTCCAATAGTGATCCTTAACTGACTGATTATAAGCTCCCTGTGC
TCCTCCCGGCCTGCAAGCGTGAGGTTTCAATGATGACTGGCAACTGAACA
ACACACCGCAACCCAAGGACAGTACTATACGAGCTGAAGAATCAAATAGG
GCCCTGAAGACCAGATATGTTGCCTACTTTAAGATCCGAACCAGATCGCC
TTCCATTCTTGTGAACCTATTCTCCCCTCAGTGATTCCATTGTCAACGGG
ACCAAGGTTTACCAGATGCAATCATTAGTCCTTCCTCCTTCTTCCTTCAT
CGCTACAGAGTTTGGACACCCCAGGTTTGATCCGGGCCCGGAGCGGCTGT
CGTTGAATTTGCCTCGGTCGACAAATGCTCGTCGATATCCCCCGCGGGAT
CTGCCTCTCCCTCGCTCTATGTCCGGTTCGGTTCCAGCAGACGACCCGCT
GGACACTTCTGGACCCGTCAGGCGCCCCGGACATCCAGAGCTGCCCCAAG
CCGCGACAACGGTGACCGCTGCAACCTCTGTATCCGCGGGGCTGTCAGGA
CCGGTCCTGCCTCCAGGATCTGCTGGCGCCGTTACCACTCACGAGTCTGT
GACCCAACGTGTGGCCCCGGCCTCAGCCGACGAAGTGCTGCGACAACCCT
TTCCCGTGGGCGATGCCTTCGCCTCATCGCGACTGCCACCCTCGCTGGTA
GGCCAAGGCATCCCGCAAGCTACCGCTACCGCTTATGCGCAACCTTCCTT
TGGAACTTCACCTCCCGGTACAACGGCGCGGGCTTTGCCGCAAAAGCCCA
CCCGACGCACCAAAGCTCATGTTGCATCAGCATGCGTTAACTGTAAAAAG
AAGCACCTAGGGTGCGATCCGGCGCGGCCATGTCGAAGATGCGTTCTGTC
AGGGAAAGAAGTGAGTATCATCATATTTCTTTGGTCGCTAGCCTATCTGA
ACGTGAAGGGGGTGGCATCTGGTCTCTGACTACCCCCAAGAAAAGGCAGA
AACTTCATTTTGCACTGCTATTATGAACTATTACTGACATGAACAGGCCA
CCTGTGTTGATGTTACGCACAAGAAGCGAGGAAGGCCGCCATTGAAGGCG
GAAGAAGCATCGCTTAGAACCTATGCAGCTCATATGGACAATCGAGCGAC
ACAAGGAGAGCAGCACGGCCCCCAATCACGACGCACCCTACACAGAGCTA
CATCTTCCCGTGAGATTCGCCCCATGACAGATCTTCAAATGCCTGGGGCG
CAGACGGGCGCCATGGCCATGAGAGCGTCGGCTGGGCATCCGCAGAGATG
GGCCGCTCCCGTATACTCGCAGGCCATAGACCCGTCGATAATGCAGCGCA
GTGTTGGGCACAGACGGTTTTCTTCTTCTGGCTCAGCACAGTCCATAACA
GCGGCTTCTCCACCCGGTTATGTCCCGATGCCTGTTGGGTACAACCCAGC
CTTGGGAGGGCAACGGATGCCTATGGGCATGGGAAGACCACTGTCATCCT
ACACGCATCAAGGCATGAACCCTACTACCACGCCGCCCCAGTATCAGCAA
TCCTTTGTCCCAATTTCGCCCTATCCAGAAAGCGCCCGGATGTCTAATCG
GATGCCAATGGGAGAATCTCCAATGTCTAGGGATCCGCGGGAAGGCTATT
TGGAATCTCCAGTAAGACTTCCGCCCATTTACCCTCCCACGATGGGAACA
CCGGCCTCAACGTCGCAAGTGCATCGCCTGAGCGATCCGTACCCAGGAGC
TTGGTCGCCGCGGACGCGGGAAGAATTTCTTCAGCAGGAGCACCGGCAAC
AAATGCCCTCGCATGGCTTCATCGACCCACTATCCCCTAGCAGTCAAATG
CGACACGCCGCATCTGACATGGGGTATGGGGAGCCCGTCCCTCGGCAATT
AGGACCTGGCTCAACTGCAGAGAGACACGCAATGCACATGTCGCTTGTAC
CTGCCCCCGATGAACCACCAACGACCGAGGCGGACACTGAGGGCAACAGG
CCAGCCAAGCGGCGCAAAATGGCCTTGGACGACATGGTGAACGACTAAGT
GTTGTTCTTCGCATAGCACCTCCTCCCCATCAAGGTCTCGATCGAGACAT
GCACACCCCATTCTTTTCTCATCGCTTAAGGAGCTACGCCGTCCTTGAAG
CGCTCCGGGCTTGTAGCAGGAACTACAAAGATAACGATCTTAATGTGCAC
TTTCTTTTGTGTCATGTGTGCCCAATCTCGATCGTTGACTACTTACTCAT
TCCCCCACATCTACTCACTTCTAATTTCCTTTGTCTCATACACCGTGCAT
ACAATCTCCCATTTTTGTTTTCGTCTTTGGAACAAAAAGTACATGACCCG
TCGAGCTACGTTCAACATTTCCTTTGTCACCTATTGTCACATTGCATGGA
TACAGGCATCGCTTCCTTCTTTATTTCTTGGTCTGTTGCTGCATAGCGTG
CTTCTGTCTTTCTTTAACCATATACCTTGGGGTTCTTGAATGTTTTGGTC
ATCGTCATAGAAGGCGTTCGGTGGAGTCCAAACATAACTCTATCATCATC
ATCATCGGCTTGATGCTTCATTACTACGTATTTGTTGGGGGAGAAAGGGG
GCAGGAGGGAAACTAATCCGTTGTATTAATAATTGGCGGGCGATGCCGTC
TAAACTCGGCACTGAGACTGCAGGGCAG
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Coding sequence (CDS) from alignment at ch8:3539507..3542384+

>KJC3_012425-T1 ID=KJC3_012425-T1|Name=KJC3_012425-T1|organism=Aspergillus niger KJC3|type=CDS|length=3294bp|location=Sequence derived from alignment at ch8:3539507..3542384+ (Aspergillus niger KJC3)
ATGCAATCATTAGTCCTTCCTCCTTCTTCCTTCATCGCTACAGAGTTTGG
ACACCCCAGGTTTGATCCGGGCCCGGAGCGGCTGTCGTTGAATTTGCCTC
GGTCGACAAATGCTCGTCGATATCCCCCGCGGGATCTGCCTCTCCCTCGC
TCTATGTCCGGTTCGGTTCCAGCAGACGACCCGCTGGACACTTCTGGACC
CGTCAGGCGCCCCGGACATCCAGAGCTGCCCCAAGCCGCGACAACGGTGA
CCGCTGCAACCTCTGTATCCGCGGGGCTGTCAGGACCGGTCCTGCCTCCA
GGATCTGCTGGCGCCGTTACCACTCACGAGTCTGTGACCCAACGTGTGGC
CCCGGCCTCAGCCGACGAAGTGCTGCGACAACCCTTTCCCGTGGGCGATG
CCTTCGCCTCATCGCGACTGCCACCCTCGCTGGTAGGCCAAGGCATCCCG
CAAGCTACCGCTACCGCTTATGCGCAACCTTCCTTTGGAACTTCACCTCC
CGGTACAACGGCGCGGGCTTTGCCGCAAAAGCCCACCCGACGCACCAAAG
CTCATGTTGCATCAGCATGCGTTAACTGTAAAAAGAAGCACCTAGGGTGC
GATCCGGCGCGGCCATGTCGAAGATGCGTTCTGTCAGGGAAAGAAGCCAC
CTGTGTTGATGTTACGCACAAGAAGCGAGGAAGGCCGCCATTGAAGGCGG
AAGAAGCATCGCTTAGAACCTATGCAGCTCATATGGACAATCGAGCGACA
CAAGGAGAGCAGCACGGCCCCCAATCACGACGCACCCTACACAGAGCTAC
ATCTTCCCGTGAGATTCGCCCCATGACAGATCTTCAAATGCCTGGGGCGC
AGACGGGCGCCATGGCCATGAGAGCGTCGGCTGGGCATCCGCAGAGATGG
GCCGCTCCCGTATACTCGCAGGCCATAGACCCGTCGATAATGCAGCGCAG
TGTTGGGCACAGACGGTTTTCTTCTTCTGGCTCAGCACAGTCCATAACAG
CGGCTTCTCCACCCGGTTATGTCCCGATGCCTGTTGGGTACAACCCAGCC
TTGGGAGGGCAACGGATGCCTATGGGCATGGGAAGACCACTGTCATCCTA
CACGCATCAAGGCATGAACCCTACTACCACGCCGCCCCAGTATCAGCAAT
CCTTTGTCCCAATTTCGCCCTATCCAGAAAGCGCCCGGATGTCTAATCGG
ATGCCAATGGGAGAATCTCCAATGTCTAGGGATCCGCGGGAAGGCTATTT
GGAATCTCCAGTAAGACTTCCGCCCATTTACCCTCCCACGATGGGAACAC
CGGCCTCAACGTCGCAAGTGCATCGCCTGAGCGATCCGTACCCAGGAGCT
TGGTCGCCGCGGACGCGGGAAGAATTTCTTCAGCAGGAGCACCGGCAACA
AATGCCCTCGCATGGCTTCATCGACCCACTATCCCCTAGCAGTCAAATGC
GACACGCCGCATCTGACATGGGGTATGGGGAGCCCGTCCCTCGGCAATTA
GGACCTGGCTCAACTGCAGAGAGACACGCAATGCACATGTCGCTTGTACC
TGCCCCCGATGAACCACCAACGACCGAGGCGGACACTGAGGGCAACAGGC
CAGCCAAGCGGCGCAAAATGGCCTTGGACGACATGGTGAACGACTAAATG
CAATCATTAGTCCTTCCTCCTTCTTCCTTCATCGCTACAGAGTTTGGACA
CCCCAGGTTTGATCCGGGCCCGGAGCGGCTGTCGTTGAATTTGCCTCGGT
CGACAAATGCTCGTCGATATCCCCCGCGGGATCTGCCTCTCCCTCGCTCT
ATGTCCGGTTCGGTTCCAGCAGACGACCCGCTGGACACTTCTGGACCCGT
CAGGCGCCCCGGACATCCAGAGCTGCCCCAAGCCGCGACAACGGTGACCG
CTGCAACCTCTGTATCCGCGGGGCTGTCAGGACCGGTCCTGCCTCCAGGA
TCTGCTGGCGCCGTTACCACTCACGAGTCTGTGACCCAACGTGTGGCCCC
GGCCTCAGCCGACGAAGTGCTGCGACAACCCTTTCCCGTGGGCGATGCCT
TCGCCTCATCGCGACTGCCACCCTCGCTGGTAGGCCAAGGCATCCCGCAA
GCTACCGCTACCGCTTATGCGCAACCTTCCTTTGGAACTTCACCTCCCGG
TACAACGGCGCGGGCTTTGCCGCAAAAGCCCACCCGACGCACCAAAGCTC
ATGTTGCATCAGCATGCGTTAACTGTAAAAAGAAGCACCTAGGGTGCGAT
CCGGCGCGGCCATGTCGAAGATGCGTTCTGTCAGGGAAAGAAGCCACCTG
TGTTGATGTTACGCACAAGAAGCGAGGAAGGCCGCCATTGAAGGCGGAAG
AAGCATCGCTTAGAACCTATGCAGCTCATATGGACAATCGAGCGACACAA
GGAGAGCAGCACGGCCCCCAATCACGACGCACCCTACACAGAGCTACATC
TTCCCGTGAGATTCGCCCCATGACAGATCTTCAAATGCCTGGGGCGCAGA
CGGGCGCCATGGCCATGAGAGCGTCGGCTGGGCATCCGCAGAGATGGGCC
GCTCCCGTATACTCGCAGGCCATAGACCCGTCGATAATGCAGCGCAGTGT
TGGGCACAGACGGTTTTCTTCTTCTGGCTCAGCACAGTCCATAACAGCGG
CTTCTCCACCCGGTTATGTCCCGATGCCTGTTGGGTACAACCCAGCCTTG
GGAGGGCAACGGATGCCTATGGGCATGGGAAGACCACTGTCATCCTACAC
GCATCAAGGCATGAACCCTACTACCACGCCGCCCCAGTATCAGCAATCCT
TTGTCCCAATTTCGCCCTATCCAGAAAGCGCCCGGATGTCTAATCGGATG
CCAATGGGAGAATCTCCAATGTCTAGGGATCCGCGGGAAGGCTATTTGGA
ATCTCCAGTAAGACTTCCGCCCATTTACCCTCCCACGATGGGAACACCGG
CCTCAACGTCGCAAGTGCATCGCCTGAGCGATCCGTACCCAGGAGCTTGG
TCGCCGCGGACGCGGGAAGAATTTCTTCAGCAGGAGCACCGGCAACAAAT
GCCCTCGCATGGCTTCATCGACCCACTATCCCCTAGCAGTCAAATGCGAC
ACGCCGCATCTGACATGGGGTATGGGGAGCCCGTCCCTCGGCAATTAGGA
CCTGGCTCAACTGCAGAGAGACACGCAATGCACATGTCGCTTGTACCTGC
CCCCGATGAACCACCAACGACCGAGGCGGACACTGAGGGCAACAGGCCAG
CCAAGCGGCGCAAAATGGCCTTGGACGACATGGTGAACGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012425KJC3_012425Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012425-T1.utr5p1KJC3_012425-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012425-T1.exon1KJC3_012425-T1.exon1Aspergillus niger KJC3exon
KJC3_012425-T1.exon2KJC3_012425-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012425-T1.cdsKJC3_012425-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012425-T1.utr3p1KJC3_012425-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012425-T1KJC3_012425-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3539507..3542384 +
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