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KJC3_012429-T1, KJC3_012429-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012429-T1
Unique NameKJC3_012429-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3553023..3555431-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012429-T1 ID=KJC3_012429-T1|Name=KJC3_012429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2409bp|location=Sequence derived from alignment at ch8:3553023..3555431- (Aspergillus niger KJC3)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCGAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTCACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGTCGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAC
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCGACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCACAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGCTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTAATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATCACTACCAAGTTCTCCTCGGCGCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCAAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTCTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAGGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATATCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGCTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGATTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTCTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGACTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGCGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACCCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Coding sequence (CDS) from alignment at ch8:3553023..3555431-

>KJC3_012429-T1 ID=KJC3_012429-T1|Name=KJC3_012429-T1|organism=Aspergillus niger KJC3|type=CDS|length=2409bp|location=Sequence derived from alignment at ch8:3553023..3555431- (Aspergillus niger KJC3)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCGAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTCACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGTCGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAC
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCGACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCACAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGCTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTAATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATCACTACCAAGTTCTCCTCGGCGCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCAAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTCTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAGGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATATCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGCTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGATTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTCTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGACTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGCGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACCCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP4KJC3_012429Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012429-T1.cdsKJC3_012429-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012429-T1.exon1KJC3_012429-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012429-T1KJC3_012429-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260YMF
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR025313
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF13959
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3553023..3555431 -
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