You are here

Home

KJC3_012436-T1, KJC3_012436-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012436-T1
Unique NameKJC3_012436-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3580023..3581913+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012436-T1 ID=KJC3_012436-T1|Name=KJC3_012436-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1891bp|location=Sequence derived from alignment at ch8:3580023..3581913+ (Aspergillus niger KJC3)
AGAAGATCGTCGAGTCTCAACTCTATTCGTCATCCCTATTGATGCCCCTG
GCTTGAGGTACTTGAAGGATGGAAAGCCTCGGAAAGCAGCGGAGTTCCAC
CTTTACAGGACTCCACTTGGCTGAGGGGTGCTCAGTCAGGCCCATTGGGT
GCTATTCTTGAACTTACAGCTGCTCCCTCGGATCACTACGCTTCTTTCTC
CTACAAATACCATCCCTTCCTAACGCTACTCTCTGTGTTAGAATTCGAGT
GACCTCTTAAATTTATAATACCTCCTCTTCTGAACATGAGCCTCTCGCGT
GCTTTGCCCCTTTGCAGGGGAACGAGCACCTTATTCAGAGCATCTCCTTC
AGCTTTGCGCCTCGCACAGCACTACCCTCTATCTGGCCGCACATTCTCAA
CTTCTGCGCAACGAGATGCTACATGGGGATTCATCGGACTGGGCCAAATG
GGTAGGTATTCGCAATCCGCGAAAACACGGACCGTCATTCAATGGCATTG
TCTAGCGTACATTGACAATCTCTTTGTCCACCACAGGCTACAACATGGCT
AAGAACCTGCGCGCTAAGATCCCTGTGACGGATACCTTGATTATACGCGA
CGTGAATGAAGAGAATATGTCTAGGTTTGTGAAGGAAGCGCAAGAAATTG
CTAGAAGCAGCGGCGCTGCTGACAGCGTTTCGGAGGTTCTGGTGGCTCAG
ACCGCGAGAGAACTTGCGGAAAAGTCGGTAAGTTGATCGTTCCTGTCACC
GCTCGATGCGAGACCCTACGTGGCGTTTGTGATCGGACACTGCCTAGTAC
ATGCCTGAAGTACTGTTTCTGCTCGCAAGAAGCCGCATCTATTTGCGTTT
ACATGCTGATAATACTATCCAGTCCGTCATTATCACCAGCCTCCCAGGGC
CGCAGCATGTCAAGGATGTCTATCACTCTGTCCTTCGAGAAGGAGAACTT
CCCGCGCTAGAAGAAGAGCGACTGTTCATCGATACGTCAACAATTGATCC
TGCGTCATCAAGAGAAATCGCGAACGCAATACAAACCACATCCCAAGGTC
GCTTTGTTGATGCCCCTGTGTCGGGCGGCGTGGTGGGTGCGCGCGCTGGC
ACATTAAGTTTCATGTTCGGTGCATCTTCGCAGACTGGTCAATTCCTTGA
TCGTGTGCGATCAGTACTACTTATGATGGGAAAGAAGGCGTGGCACATGG
GCGCCCCGGGAGCCGGCGTTTCAGGCAAACTGGCGAACAATTACATCCTG
GCGATCAACAACATTGCGACCGCGGAAGCAATGAACCTCGGCATGCGTTG
GGGACTGGACCCTAAAGCTTTGGCGGAACTCGTCAATTCGTCAACTGGCC
GGTGTTGGCCTATGGAAGTCAACAACCCTGTACCTGGCGTGGTCGAGACG
GCACCGGCATCTCGTGGTTACGAGGGCGGCTTCGGTGTGAGCCTGATGAA
CAAGGACCTTCGATTGGCGATTACTGCTGCGGAGGAGTCGCAAACACCAT
TGGCGCTGGCGGACACTGCCCAGAAGGTGTATAATGCCGTTGAGGAGGAA
CACCGAGGGAAGGACTTTTCCGTGGTGTACAAATGGCTGAAGGAGCACTC
GCAATGATATCTCGGCTGGTACATGAGACCATTTGCCTCCGATAAAGCCT
AGAAGATTTACTTTTGTCAAGAAAAACGACGATGTCTCTAATGAGACTAC
TTGGTCCGTTATTCTTCCTACTTGCCAAGCCTGTTCATGATCTGCATTTC
TAGTCCCTGTCAGCTATTATCTCAGGTATTATATATATAGATGACGCCTG
CAGCACCATTGTTGTATTAAGTTCGCCTACAGGGCCGTTTTATACTTACT
GGATACCCATCGACTAGCCTAAATTCCAGCCCTCGTATCAG
back to top

Coding sequence (CDS) from alignment at ch8:3580023..3581913+

>KJC3_012436-T1 ID=KJC3_012436-T1|Name=KJC3_012436-T1|organism=Aspergillus niger KJC3|type=CDS|length=3276bp|location=Sequence derived from alignment at ch8:3580023..3581913+ (Aspergillus niger KJC3)
ATGAGCCTCTCGCGTGCTTTGCCCCTTTGCAGGGGAACGAGCACCTTATT
CAGAGCATCTCCTTCAGCTTTGCGCCTCGCACAGCACTACCCTCTATCTG
GCCGCACATTCTCAACTTCTGCGCAACGAGATGCTACATGGGGATTCATC
GGACTGGGCCAAATGGGCTACAACATGGCTAAGAACCTGCGCGCTAAGAT
CCCTGTGACGGATACCTTGATTATACGCGACGTGAATGAAGAGAATATGT
CTAGGTTTGTGAAGGAAGCGCAAGAAATTGCTAGAAGCAGCGGCGCTGCT
GACAGCGTTTCGGAGGTTCTGGTGGCTCAGACCGCGAGAGAACTTGCGGA
AAAGTCGTCCGTCATTATCACCAGCCTCCCAGGGCCGCAGCATGTCAAGG
ATGTCTATCACTCTGTCCTTCGAGAAGGAGAACTTCCCGCGCTAGAAGAA
GAGCGACTGTTCATCGATACGTCAACAATTGATCCTGCGTCATCAAGAGA
AATCGCGAACGCAATACAAACCACATCCCAAGGTCGCTTTGTTGATGCCC
CTGTGTCGGGCGGCGTGGTGGGTGCGCGCGCTGGCACATTAAGTTTCATG
TTCGGTGCATCTTCGCAGACTGGTCAATTCCTTGATCGTGTGCGATCAGT
ACTACTTATGATGGGAAAGAAGGCGTGGCACATGGGCGCCCCGGGAGCCG
GCGTTTCAGGCAAACTGGCGAACAATTACATCCTGGCGATCAACAACATT
GCGACCGCGGAAGCAATGAACCTCGGCATGCGTTGGGGACTGGACCCTAA
AGCTTTGGCGGAACTCGTCAATTCGTCAACTGGCCGGTGTTGGCCTATGG
AAGTCAACAACCCTGTACCTGGCGTGGTCGAGACGGCACCGGCATCTCGT
GGTTACGAGGGCGGCTTCGGTGTGAGCCTGATGAACAAGGACCTTCGATT
GGCGATTACTGCTGCGGAGGAGTCGCAAACACCATTGGCGCTGGCGGACA
CTGCCCAGAAGGTGTATAATGCCGTTGAGGAGGAACACCGAGGGAAGGAC
TTTTCCGTGGTGTACAAATGGCTGAAGGAGCACTCGCAATGAATGAGCCT
CTCGCGTGCTTTGCCCCTTTGCAGGGGAACGAGCACCTTATTCAGAGCAT
CTCCTTCAGCTTTGCGCCTCGCACAGCACTACCCTCTATCTGGCCGCACA
TTCTCAACTTCTGCGCAACGAGATGCTACATGGGGATTCATCGGACTGGG
CCAAATGGGCTACAACATGGCTAAGAACCTGCGCGCTAAGATCCCTGTGA
CGGATACCTTGATTATACGCGACGTGAATGAAGAGAATATGTCTAGGTTT
GTGAAGGAAGCGCAAGAAATTGCTAGAAGCAGCGGCGCTGCTGACAGCGT
TTCGGAGGTTCTGGTGGCTCAGACCGCGAGAGAACTTGCGGAAAAGTCGT
CCGTCATTATCACCAGCCTCCCAGGGCCGCAGCATGTCAAGGATGTCTAT
CACTCTGTCCTTCGAGAAGGAGAACTTCCCGCGCTAGAAGAAGAGCGACT
GTTCATCGATACGTCAACAATTGATCCTGCGTCATCAAGAGAAATCGCGA
ACGCAATACAAACCACATCCCAAGGTCGCTTTGTTGATGCCCCTGTGTCG
GGCGGCGTGGTGGGTGCGCGCGCTGGCACATTAAGTTTCATGTTCGGTGC
ATCTTCGCAGACTGGTCAATTCCTTGATCGTGTGCGATCAGTACTACTTA
TGATGGGAAAGAAGGCGTGGCACATGGGCGCCCCGGGAGCCGGCGTTTCA
GGCAAACTGGCGAACAATTACATCCTGGCGATCAACAACATTGCGACCGC
GGAAGCAATGAACCTCGGCATGCGTTGGGGACTGGACCCTAAAGCTTTGG
CGGAACTCGTCAATTCGTCAACTGGCCGGTGTTGGCCTATGGAAGTCAAC
AACCCTGTACCTGGCGTGGTCGAGACGGCACCGGCATCTCGTGGTTACGA
GGGCGGCTTCGGTGTGAGCCTGATGAACAAGGACCTTCGATTGGCGATTA
CTGCTGCGGAGGAGTCGCAAACACCATTGGCGCTGGCGGACACTGCCCAG
AAGGTGTATAATGCCGTTGAGGAGGAACACCGAGGGAAGGACTTTTCCGT
GGTGTACAAATGGCTGAAGGAGCACTCGCAATGAATGAGCCTCTCGCGTG
CTTTGCCCCTTTGCAGGGGAACGAGCACCTTATTCAGAGCATCTCCTTCA
GCTTTGCGCCTCGCACAGCACTACCCTCTATCTGGCCGCACATTCTCAAC
TTCTGCGCAACGAGATGCTACATGGGGATTCATCGGACTGGGCCAAATGG
GCTACAACATGGCTAAGAACCTGCGCGCTAAGATCCCTGTGACGGATACC
TTGATTATACGCGACGTGAATGAAGAGAATATGTCTAGGTTTGTGAAGGA
AGCGCAAGAAATTGCTAGAAGCAGCGGCGCTGCTGACAGCGTTTCGGAGG
TTCTGGTGGCTCAGACCGCGAGAGAACTTGCGGAAAAGTCGTCCGTCATT
ATCACCAGCCTCCCAGGGCCGCAGCATGTCAAGGATGTCTATCACTCTGT
CCTTCGAGAAGGAGAACTTCCCGCGCTAGAAGAAGAGCGACTGTTCATCG
ATACGTCAACAATTGATCCTGCGTCATCAAGAGAAATCGCGAACGCAATA
CAAACCACATCCCAAGGTCGCTTTGTTGATGCCCCTGTGTCGGGCGGCGT
GGTGGGTGCGCGCGCTGGCACATTAAGTTTCATGTTCGGTGCATCTTCGC
AGACTGGTCAATTCCTTGATCGTGTGCGATCAGTACTACTTATGATGGGA
AAGAAGGCGTGGCACATGGGCGCCCCGGGAGCCGGCGTTTCAGGCAAACT
GGCGAACAATTACATCCTGGCGATCAACAACATTGCGACCGCGGAAGCAA
TGAACCTCGGCATGCGTTGGGGACTGGACCCTAAAGCTTTGGCGGAACTC
GTCAATTCGTCAACTGGCCGGTGTTGGCCTATGGAAGTCAACAACCCTGT
ACCTGGCGTGGTCGAGACGGCACCGGCATCTCGTGGTTACGAGGGCGGCT
TCGGTGTGAGCCTGATGAACAAGGACCTTCGATTGGCGATTACTGCTGCG
GAGGAGTCGCAAACACCATTGGCGCTGGCGGACACTGCCCAGAAGGTGTA
TAATGCCGTTGAGGAGGAACACCGAGGGAAGGACTTTTCCGTGGTGTACA
AATGGCTGAAGGAGCACTCGCAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050661NADP binding
GO:0051287NAD binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012436KJC3_012436Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012436-T1KJC3_012436-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012436-T1.utr5p1KJC3_012436-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012436-T1.exon1KJC3_012436-T1.exon1Aspergillus niger KJC3exon
KJC3_012436-T1.exon2KJC3_012436-T1.exon2Aspergillus niger KJC3exon
KJC3_012436-T1.exon3KJC3_012436-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012436-T1.cdsKJC3_012436-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012436-T1.utr3p1KJC3_012436-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002204
DBxrefInterPro:IPR006115
DBxrefInterPro:IPR029154
DBxrefInterPro:IPR013328
DBxrefPFAM:PF03446
DBxrefPFAM:PF14833
DBxrefPFAM:PF03807
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3580023..3581913 +
Powered by Drupal