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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3580023..3581913+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012436-T2 ID=KJC3_012436-T2|Name=KJC3_012436-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1891bp|location=Sequence derived from alignment at ch8:3580023..3581913+ (Aspergillus niger KJC3)
AGAAGATCGTCGAGTCTCAACTCTATTCGTCATCCCTATTGATGCCCCTG
GCTTGAGGTACTTGAAGGATGGAAAGCCTCGGAAAGCAGCGGAGTTCCAC
CTTTACAGGACTCCACTTGGCTGAGGGGTGCTCAGTCAGGCCCATTGGGT
GCTATTCTTGAACTTACAGCTGCTCCCTCGGATCACTACGCTTCTTTCTC
CTACAAATACCATCCCTTCCTAACGCTACTCTCTGTGTTAGAATTCGAGT
GACCTCTTAAATTTATAATACCTCCTCTTCTGAACATGAGCCTCTCGCGT
GCTTTGCCCCTTTGCAGGGGAACGAGCACCTTATTCAGAGCATCTCCTTC
AGCTTTGCGCCTCGCACAGCACTACCCTCTATCTGGCCGCACATTCTCAA
CTTCTGCGCAACGAGATGCTACATGGGGATTCATCGGACTGGGCCAAATG
GGTAGGTATTCGCAATCCGCGAAAACACGGACCGTCATTCAATGGCATTG
TCTAGCGTACATTGACAATCTCTTTGTCCACCACAGGCTACAACATGGCT
AAGAACCTGCGCGCTAAGATCCCTGTGACGGATACCTTGATTATACGCGA
CGTGAATGAAGAGAATATGTCTAGGTTTGTGAAGGAAGCGCAAGAAATTG
CTAGAAGCAGCGGCGCTGCTGACAGCGTTTCGGAGGTTCTGGTGGCTCAG
ACCGCGAGAGAACTTGCGGAAAAGTCGGTAAGTTGATCGTTCCTGTCACC
GCTCGATGCGAGACCCTACGTGGCGTTTGTGATCGGACACTGCCTAGTAC
ATGCCTGAAGTACTGTTTCTGCTCGCAAGAAGCCGCATCTATTTGCGTTT
ACATGCTGATAATACTATCCAGTCCGTCATTATCACCAGCCTCCCAGGGC
CGCAGCATGTCAAGGATGTCTATCACTCTGTCCTTCGAGAAGGAGAACTT
CCCGCGCTAGAAGAAGAGCGACTGTTCATCGATACGTCAACAATTGATCC
TGCGTCATCAAGAGAAATCGCGAACGCAATACAAACCACATCCCAAGGTC
GCTTTGTTGATGCCCCTGTGTCGGGCGGCGTGGTGGGTGCGCGCGCTGGC
ACATTAAGTTTCATGTTCGGTGCATCTTCGCAGACTGGTCAATTCCTTGA
TCGTGTGCGATCAGTACTACTTATGATGGGAAAGAAGGCGTGGCACATGG
GCGCCCCGGGAGCCGGCGTTTCAGGCAAACTGGCGAACAATTACATCCTG
GCGATCAACAACATTGCGACCGCGGAAGCAATGAACCTCGGCATGCGTTG
GGGACTGGACCCTAAAGCTTTGGCGGAACTCGTCAATTCGTCAACTGGCC
GGTGTTGGCCTATGGAAGTCAACAACCCTGTACCTGGCGTGGTCGAGACG
GCACCGGCATCTCGTGGTTACGAGGGCGGCTTCGGTGTGAGCCTGATGAA
CAAGGACCTTCGATTGGCGATTACTGCTGCGGAGGAGTCGCAAACACCAT
TGGCGCTGGCGGACACTGCCCAGAAGGTGTATAATGCCGTTGAGGAGGAA
CACCGAGGGAAGGACTTTTCCGTGGTGTACAAATGGCTGAAGGAGCACTC
GCAATGATATCTCGGCTGGTACATGAGACCATTTGCCTCCGATAAAGCCT
AGAAGATTTACTTTTGTCAAGAAAAACGACGATGTCTCTAATGAGACTAC
TTGGTCCGTTATTCTTCCTACTTGCCAAGCCTGTTCATGATCTGCATTTC
TAGTCCCTGTCAGCTATTATCTCAGGTATTATATATATAGATGACGCCTG
CAGCACCATTGTTGTATTAAGTTCGCCTACAGGGCCGTTTTATACTTACT
GGATACCCATCGACTAGCCTAAATTCCAGCCCTCGTATCAG back to topCoding sequence (CDS) from alignment at ch8:3580023..3581913+ >KJC3_012436-T2 ID=KJC3_012436-T2|Name=KJC3_012436-T2|organism=Aspergillus niger KJC3|type=CDS|length=1836bp|location=Sequence derived from alignment at ch8:3580023..3581913+ (Aspergillus niger KJC3)
ATGGCTAAGAACCTGCGCGCTAAGATCCCTGTGACGGATACCTTGATTAT
ACGCGACGTGAATGAAGAGAATATGTCTAGGTTTGTGAAGGAAGCGCAAG
AAATTGCTAGAAGCAGCGGCGCTGCTGACAGCGTTTCGGAGGTTCTGGTG
GCTCAGACCGCGAGAGAACTTGCGGAAAAGTCGTCCGTCATTATCACCAG
CCTCCCAGGGCCGCAGCATGTCAAGGATGTCTATCACTCTGTCCTTCGAG
AAGGAGAACTTCCCGCGCTAGAAGAAGAGCGACTGTTCATCGATACGTCA
ACAATTGATCCTGCGTCATCAAGAGAAATCGCGAACGCAATACAAACCAC
ATCCCAAGGTCGCTTTGTTGATGCCCCTGTGTCGGGCGGCGTGGTGGGTG
CGCGCGCTGGCACATTAAGTTTCATGTTCGGTGCATCTTCGCAGACTGGT
CAATTCCTTGATCGTGTGCGATCAGTACTACTTATGATGGGAAAGAAGGC
GTGGCACATGGGCGCCCCGGGAGCCGGCGTTTCAGGCAAACTGGCGAACA
ATTACATCCTGGCGATCAACAACATTGCGACCGCGGAAGCAATGAACCTC
GGCATGCGTTGGGGACTGGACCCTAAAGCTTTGGCGGAACTCGTCAATTC
GTCAACTGGCCGGTGTTGGCCTATGGAAGTCAACAACCCTGTACCTGGCG
TGGTCGAGACGGCACCGGCATCTCGTGGTTACGAGGGCGGCTTCGGTGTG
AGCCTGATGAACAAGGACCTTCGATTGGCGATTACTGCTGCGGAGGAGTC
GCAAACACCATTGGCGCTGGCGGACACTGCCCAGAAGGTGTATAATGCCG
TTGAGGAGGAACACCGAGGGAAGGACTTTTCCGTGGTGTACAAATGGCTG
AAGGAGCACTCGCAATGAATGGCTAAGAACCTGCGCGCTAAGATCCCTGT
GACGGATACCTTGATTATACGCGACGTGAATGAAGAGAATATGTCTAGGT
TTGTGAAGGAAGCGCAAGAAATTGCTAGAAGCAGCGGCGCTGCTGACAGC
GTTTCGGAGGTTCTGGTGGCTCAGACCGCGAGAGAACTTGCGGAAAAGTC
GTCCGTCATTATCACCAGCCTCCCAGGGCCGCAGCATGTCAAGGATGTCT
ATCACTCTGTCCTTCGAGAAGGAGAACTTCCCGCGCTAGAAGAAGAGCGA
CTGTTCATCGATACGTCAACAATTGATCCTGCGTCATCAAGAGAAATCGC
GAACGCAATACAAACCACATCCCAAGGTCGCTTTGTTGATGCCCCTGTGT
CGGGCGGCGTGGTGGGTGCGCGCGCTGGCACATTAAGTTTCATGTTCGGT
GCATCTTCGCAGACTGGTCAATTCCTTGATCGTGTGCGATCAGTACTACT
TATGATGGGAAAGAAGGCGTGGCACATGGGCGCCCCGGGAGCCGGCGTTT
CAGGCAAACTGGCGAACAATTACATCCTGGCGATCAACAACATTGCGACC
GCGGAAGCAATGAACCTCGGCATGCGTTGGGGACTGGACCCTAAAGCTTT
GGCGGAACTCGTCAATTCGTCAACTGGCCGGTGTTGGCCTATGGAAGTCA
ACAACCCTGTACCTGGCGTGGTCGAGACGGCACCGGCATCTCGTGGTTAC
GAGGGCGGCTTCGGTGTGAGCCTGATGAACAAGGACCTTCGATTGGCGAT
TACTGCTGCGGAGGAGTCGCAAACACCATTGGCGCTGGCGGACACTGCCC
AGAAGGTGTATAATGCCGTTGAGGAGGAACACCGAGGGAAGGACTTTTCC
GTGGTGTACAAATGGCTGAAGGAGCACTCGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051287 | NAD binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050661 | NADP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012436-T2.utr5p1 | KJC3_012436-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012436-T2.utr3p1 | KJC3_012436-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR029154 |
| DBxref | InterPro:IPR015815 |
| DBxref | InterPro:IPR006115 |
| DBxref | PFAM:PF03446 |
| DBxref | PFAM:PF14833 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3580023..3581913 + |
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