You are here

Home

KJC3_012447-T1, KJC3_012447-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012447-T1
Unique NameKJC3_012447-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3601011..3601889+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012447-T1 ID=KJC3_012447-T1|Name=KJC3_012447-T1|organism=Aspergillus niger KJC3|type=mRNA|length=879bp|location=Sequence derived from alignment at ch8:3601011..3601889+ (Aspergillus niger KJC3)
ATGGAGAACGCCACCATGACAACCCCGCAGCTGGTTCAAATTACACTCTC
GGACGAGGAACGCGCTACTAAGACTCTCTCTTCTCATAACCTTCAAGCAG
CTCTTGAGGGTCTCCATCGGGATGGCGTATGTGTCATTATTAACGGCGTT
GACCCTATTCATCTCGATAAGCTGAACGATCGCATGGTCCCCGAGGCCAA
GACCCTGTATGCCAATCCACAAACCCACCGCAACTTTGGCTCTCGTACCG
GAAACATCCAGCAAGAGCCTGTTGTCGACTCGAGCTATATGTTTGAGGAC
GTTATTGCAAACCCCTGGGCAACTGCCATCACCGAATGCATGCTGGGACC
CAACCCACACCTGCGTTTCTATAGCGCCAACACGGCCTTCAAAGCTGAAG
ACCGACAACCGGTGCATGTAGACGTGCACTTTGACTTCCCCAAGATGCCA
TTTGGACTATGTATCAATATAAACCTGGTGGCGACCTCTCCGGAAAATGG
CGCTACTGAGCTCTGGCCTGGTAGCCACCGGGACGCCGATCCTCGAGACA
GTGACGACACCGGTGTGATCCCGGAGATCGTTGAAGCACGGCGCAGGGTT
TCTCCCCCAGTGCAGCCATCGCTACCCAAGGGAGCGATTATTATTCGGGA
TTTCCGGCTGTGGCATGCAGGCATGCCGAACCGCACGGATGACCCGCGTG
TTATGCTCGTGACAATTCATTTCCCGGCGTGGTATCGTACAGACTTAAAG
GTCGTGTTACCTCGGAGCTTGCAGGGAAAGGTGGACTGGGGTCATCTAGT
GCCGTGCGTTGAGTGGGTGGACGAGGACTATGACTATTTGAAGGGCCGGC
ATGACCATGACTTTACATTGCAGCCATAG
back to top

Coding sequence (CDS) from alignment at ch8:3601011..3601889+

>KJC3_012447-T1 ID=KJC3_012447-T1|Name=KJC3_012447-T1|organism=Aspergillus niger KJC3|type=CDS|length=879bp|location=Sequence derived from alignment at ch8:3601011..3601889+ (Aspergillus niger KJC3)
ATGGAGAACGCCACCATGACAACCCCGCAGCTGGTTCAAATTACACTCTC
GGACGAGGAACGCGCTACTAAGACTCTCTCTTCTCATAACCTTCAAGCAG
CTCTTGAGGGTCTCCATCGGGATGGCGTATGTGTCATTATTAACGGCGTT
GACCCTATTCATCTCGATAAGCTGAACGATCGCATGGTCCCCGAGGCCAA
GACCCTGTATGCCAATCCACAAACCCACCGCAACTTTGGCTCTCGTACCG
GAAACATCCAGCAAGAGCCTGTTGTCGACTCGAGCTATATGTTTGAGGAC
GTTATTGCAAACCCCTGGGCAACTGCCATCACCGAATGCATGCTGGGACC
CAACCCACACCTGCGTTTCTATAGCGCCAACACGGCCTTCAAAGCTGAAG
ACCGACAACCGGTGCATGTAGACGTGCACTTTGACTTCCCCAAGATGCCA
TTTGGACTATGTATCAATATAAACCTGGTGGCGACCTCTCCGGAAAATGG
CGCTACTGAGCTCTGGCCTGGTAGCCACCGGGACGCCGATCCTCGAGACA
GTGACGACACCGGTGTGATCCCGGAGATCGTTGAAGCACGGCGCAGGGTT
TCTCCCCCAGTGCAGCCATCGCTACCCAAGGGAGCGATTATTATTCGGGA
TTTCCGGCTGTGGCATGCAGGCATGCCGAACCGCACGGATGACCCGCGTG
TTATGCTCGTGACAATTCATTTCCCGGCGTGGTATCGTACAGACTTAAAG
GTCGTGTTACCTCGGAGCTTGCAGGGAAAGGTGGACTGGGGTCATCTAGT
GCCGTGCGTTGAGTGGGTGGACGAGGACTATGACTATTTGAAGGGCCGGC
ATGACCATGACTTTACATTGCAGCCATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012447KJC3_012447Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012447-T1.exon1KJC3_012447-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012447-T1.cdsKJC3_012447-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012447-T1KJC3_012447-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3601011..3601889 +
Powered by Drupal