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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3605826..3608998- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012450-T1 ID=KJC3_012450-T1|Name=KJC3_012450-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3173bp|location=Sequence derived from alignment at ch8:3605826..3608998- (Aspergillus niger KJC3)
ACCCATTCAATCCCCTCATCTGTCTCGCTTAACGCGCCAGACGTCCCCCC
TGTTACTCCTACAGGACTCGGTACGCCTTCAGCATCACACCATGTGCGCC
AATCGTTGATCGCTCCGCCCGACTCCCCGCAATCCGTGACGGACAGCCTT
CGATAGCTACCATCCCTCCATACCTCCACCAAACATGGCTACGCCGACTC
TGGACCGTTTCTTCGCCAGCATCGCTGACCTGGTCAAGGCTCGAGATGGG
CGCCAACTTCAAGACTATCTGCAGCTCGAGCCTCCCTTGCCCGATATTTA
TCGACAAATGGTGGAGGAATTGCGGCAACATTATCCGACCGGTCCTAAAG
AGACAGAGCTAATGCGACGATGCGAAACCCTCGTTCCTAAAACCAAAGGC
GCCCCATGGACCGCTTTTCCTACCTTTATGAAGCTATACTTTACCTTTCT
ACGCGATGTCAACTTGGACAACCTGCTCGAAACATACGATCTCCTCAAAG
GACTATTGAAGTAGGTATTATACAACTCGTTGCTGGCATAATTGCTGACC
CGCAACTGTGCCATTCAGCCAATGTGTACTGGCATTAGGTGACAGCCAAA
TGGGAGTTATAGTCCTCCCCACCGTCTTGTACCTCTCGAAAGTCCTTGCA
AAGCTGGCCATGGGCCTCGATCGACGTCCTGACTTAATCGCCCACCTGCT
GCGACTCGAAGGCCGGTCGAACCAGGAAGAAGCTACGGAAAAAGTGACGC
TGGTGGAGAAATCTGCAAATGTCGTTCGAGAGGCATTCATTAAGTGCCTA
ACGGACAGAAGTGGCACGCCAGGTATCCACGGAAAGCCCGAAGGGAAGAG
GATAGGGATCTATTTGATGGCAAACCTTTGCCTGAAACTGCTTTTCCAAG
TATGACTGGATATTCTTCTAGTGCGATCAATGGACTAACATAGGCCAGTG
CGGCAAACTCCGAAACGCAGAGCAAATGTTTGCGAGTATCAGCGCACAAT
CCCCTCCTCTGAAACATTTCCCAGCTTCGCAGCGCGTCACCTATTTATAC
TACCTCGGACGTTATCTGTTCTCCAACAACCTCTTTTATCCCGCCCAGAT
CGCCCTGCAAGCTTCTTACGATCAATGCCACCGCCAGGCGACGAATCAAA
AACGAGTCATCCTGACCTACCTCATCCCTTGTAACATCATACTAGGGCGC
TTCCCCTCATTACAGTTATTGCAACGTCCTGAGGCCGAAGGGCTAGTAGA
CAAATTCGTTCCGATTTGTCGGTTAATTGCTCGGGGCGATTATATTGCGT
TTCGCGAGCACCTTGCAATCGGCTCCCCCGAAACAGAATGGTTCGCTCGG
AAAGGCATCCTTCTTGCCCTACGCAATCGGTGCGAGATTCTTGTTTGGCG
GTCACTTGCACGAAAGGTCTTCATCCATGCCGGTTTCCACGGCGATCCTT
CACTTGGCCCTTCTCAACGTGGACCGCCACCGTACCTCTATCTGAACAAG
CTGGACACCGCGGTCCGGTGGATTCAATCTCAGCATGCCCATTCGGGCCA
AAGCTCAATTGGAATCTTCGCCTCCAAGCCCGAGCCGGATTCCCAGGCGG
GCCAAAATCAGGTTGGGTCCCAGATCGTACACAAAGCTACAGATCGGGAT
TTCGAGGGGCTCAGCGAGCTGGACGCACAAGAGGCGGTCGCAAGCCCAGG
GCTTATTGAGAAATACGGAGACTATTTGGCACCGGACGGATATTTCGATG
CGCAAGGACAGTGGCAGCTAAACCCACCGGGCAGACTTGTTGATGGCCAG
CCCCCTGTCGATTACCAGCAATATGAGCTTGACCCGTACGCGAGTCCAGC
CGACAGCGAGCAAGACTCGGGCAAACCTACTCTTATGATGCGCGAGCTCG
AGTCCATCCTGGCCTCCCTCCTCACACAGGGTCTGATGCGTGGATTCCTG
ACTCATAAGAATCCTCGTCTGGCGATCCCTGGCGCGCGTCTCCGTGGTGC
CGTGCCGACTGGCTTTCCCAATGTCTGGCAGACAATCCTAGCTCGGGAAC
AAGAAGATGACAACGTTCCTGGATGGGTCCAGCCACCAGCGGTGGCAGCA
CCTCCGACAGCCGGAGGTGGACGCGTGGTCAATCTGTCCGGGGCGAGACC
TGTCGGAGTACAGTGACGACATTAGCTATCCATGTGGAGGCACAACCCCA
TGAAGGATCTCTTGTAAATAGCAACGAATGCCATGACACGAACACAAAAT
AACTATGTGAATGAAAAGCCAACATCTGGTACCTGATGTGCCTTGGACGA
TAAATCATCCGCATCAAGTCACTCGGGCCGACTGATCGGTCAAAAACTCT
ACTTTGGAGAATGATCGACCGCCAATCTCGGGGTCGGGCCCGAGATCTCG
GTCATAACTCAGGAGCCGAGGATTAAACGCCGACACTCCCGGCTTTTGTG
GATATCTGCCTCAAATTGATGATTCTGGACTCCGAGCATGTGGAGCAGGG
TCTCTCGGCCGTGAGCTCGCAGTCCTTAATTGGCATGGCGGCGGGTGTGA
CAGACTTCTGCACGATTCTTGAAGAATTCCAGAACAGGTGGCGAGCGCTT
ATCCACGAAATGACCGGGGTAAATTCAAGATAAGCTTATTTGGGCATGCA
GAACTAGTATAAGTACAGTCCACGGCTTCTGGTCCATCTCACAGCTGTCC
AAGCAGTTTCCGGGAAACCTCATACCGGACGCAACGTGATACTATGGTCC
GATAGAAAATGGTATAACACTATGGCTCGGTCCGAATCAAACAGGCATAG
CAATATCACAACAGGCTTAAATTCCCGCTAGATGACGACACCACCCTCGG
TGCAAACAGTCTCCCCTGGTAGAATCTCGGACTTGCATTTCTGAGCTTGC
GTATACCTCGAAGGCCATCTTTATAAAAAGGAAACCTCTCCCAGTTACTT
TGCCACTCCATCACACTTTCATAACAGCAATCCTTCAGCACTCATTCTTT
TCTCTTCAACATCTAGCTGCAGCGATCTTCCCCATGCGCGCTGTTTCAAC
TATAATCGGCGTGGCAGCCGCTGTGCCGCTGGTTGCGTCTGCAGCCATTC
AGACAAGATCAGCTGGCTCTGACCTCCCCATCGTGAACACCACTCTGGGA
TATGTGCGGGGCACACACTCCCC back to topCoding sequence (CDS) from alignment at ch8:3605826..3608998- >KJC3_012450-T1 ID=KJC3_012450-T1|Name=KJC3_012450-T1|organism=Aspergillus niger KJC3|type=CDS|length=5625bp|location=Sequence derived from alignment at ch8:3605826..3608998- (Aspergillus niger KJC3)
TGCGGCAAACTCCGAAACGCAGAGCAAATGTTTGCGAGTATCAGCGCACA
ATCCCCTCCTCTGAAACATTTCCCAGCTTCGCAGCGCGTCACCTATTTAT
ACTACCTCGGACGTTATCTGTTCTCCAACAACCTCTTTTATCCCGCCCAG
ATCGCCCTGCAAGCTTCTTACGATCAATGCCACCGCCAGGCGACGAATCA
AAAACGAGTCATCCTGACCTACCTCATCCCTTGTAACATCATACTAGGGC
GCTTCCCCTCATTACAGTTATTGCAACGTCCTGAGGCCGAAGGGCTAGTA
GACAAATTCGTTCCGATTTGTCGGTTAATTGCTCGGGGCGATTATATTGC
GTTTCGCGAGCACCTTGCAATCGGCTCCCCCGAAACAGAATGGTTCGCTC
GGAAAGGCATCCTTCTTGCCCTACGCAATCGGTGCGAGATTCTTGTTTGG
CGGTCACTTGCACGAAAGGTCTTCATCCATGCCGGTTTCCACGGCGATCC
TTCACTTGGCCCTTCTCAACGTGGACCGCCACCGTACCTCTATCTGAACA
AGCTGGACACCGCGGTCCGGTGGATTCAATCTCAGCATGCCCATTCGGGC
CAAAGCTCAATTGGAATCTTCGCCTCCAAGCCCGAGCCGGATTCCCAGGC
GGGCCAAAATCAGGTTGGGTCCCAGATCGTACACAAAGCTACAGATCGGG
ATTTCGAGGGGCTCAGCGAGCTGGACGCACAAGAGGCGGTCGCAAGCCCA
GGGCTTATTGAGAAATACGGAGACTATTTGGCACCGGACGGATATTTCGA
TGCGCAAGGACAGTGGCAGCTAAACCCACCGGGCAGACTTGTTGATGGCC
AGCCCCCTGTCGATTACCAGCAATATGAGCTTGACCCGTACGCGAGTCCA
GCCGACAGCGAGCAAGACTCGGGCAAACCTACTCTTATGATGCGCGAGCT
CGAGTCCATCCTGGCCTCCCTCCTCACACAGGGTCTGATGCGTGGATTCC
TGACTCATAAGAATCCTCGTCTGGCGATCCCTGGCGCGCGTCTCCGTGGT
GCCGTGCCGACTGGCTTTCCCAATGTCTGGCAGACAATCCTAGCTCGGGA
ACAAGAAGATGACAACGTTCCTGGATGGGTCCAGCCACCAGCGGTGGCAG
CACCTCCGACAGCCGGAGGTGGACGCGTGGTCAATCTGTCCGGGGCGAGA
CCTGTCGGAGTACAGTGACCAATGTGTACTGGCATTAGGTGACAGCCAAA
TGGGAGTTATAGTCCTCCCCACCGTCTTGTACCTCTCGAAAGTCCTTGCA
AAGCTGGCCATGGGCCTCGATCGACGTCCTGACTTAATCGCCCACCTGCT
GCGACTCGAAGGCCGGTCGAACCAGGAAGAAGCTACGGAAAAAGTGACGC
TGGTGGAGAAATCTGCAAATGTCGTTCGAGAGGCATTCATTAAGTGCCTA
ACGGACAGAAGTGGCACGCCAGGTATCCACGGAAAGCCCGAAGGGAAGAG
GATAGGGATCTATTTGATGGCAAACCTTTGCCTGAAACTGCTTTTCCAAA
TGGCTACGCCGACTCTGGACCGTTTCTTCGCCAGCATCGCTGACCTGGTC
AAGGCTCGAGATGGGCGCCAACTTCAAGACTATCTGCAGCTCGAGCCTCC
CTTGCCCGATATTTATCGACAAATGGTGGAGGAATTGCGGCAACATTATC
CGACCGGTCCTAAAGAGACAGAGCTAATGCGACGATGCGAAACCCTCGTT
CCTAAAACCAAAGGCGCCCCATGGACCGCTTTTCCTACCTTTATGAAGCT
ATACTTTACCTTTCTACGCGATGTCAACTTGGACAACCTGCTCGAAACAT
ACGATCTCCTCAAAGGACTATTGAATGCGGCAAACTCCGAAACGCAGAGC
AAATGTTTGCGAGTATCAGCGCACAATCCCCTCCTCTGAAACATTTCCCA
GCTTCGCAGCGCGTCACCTATTTATACTACCTCGGACGTTATCTGTTCTC
CAACAACCTCTTTTATCCCGCCCAGATCGCCCTGCAAGCTTCTTACGATC
AATGCCACCGCCAGGCGACGAATCAAAAACGAGTCATCCTGACCTACCTC
ATCCCTTGTAACATCATACTAGGGCGCTTCCCCTCATTACAGTTATTGCA
ACGTCCTGAGGCCGAAGGGCTAGTAGACAAATTCGTTCCGATTTGTCGGT
TAATTGCTCGGGGCGATTATATTGCGTTTCGCGAGCACCTTGCAATCGGC
TCCCCCGAAACAGAATGGTTCGCTCGGAAAGGCATCCTTCTTGCCCTACG
CAATCGGTGCGAGATTCTTGTTTGGCGGTCACTTGCACGAAAGGTCTTCA
TCCATGCCGGTTTCCACGGCGATCCTTCACTTGGCCCTTCTCAACGTGGA
CCGCCACCGTACCTCTATCTGAACAAGCTGGACACCGCGGTCCGGTGGAT
TCAATCTCAGCATGCCCATTCGGGCCAAAGCTCAATTGGAATCTTCGCCT
CCAAGCCCGAGCCGGATTCCCAGGCGGGCCAAAATCAGGTTGGGTCCCAG
ATCGTACACAAAGCTACAGATCGGGATTTCGAGGGGCTCAGCGAGCTGGA
CGCACAAGAGGCGGTCGCAAGCCCAGGGCTTATTGAGAAATACGGAGACT
ATTTGGCACCGGACGGATATTTCGATGCGCAAGGACAGTGGCAGCTAAAC
CCACCGGGCAGACTTGTTGATGGCCAGCCCCCTGTCGATTACCAGCAATA
TGAGCTTGACCCGTACGCGAGTCCAGCCGACAGCGAGCAAGACTCGGGCA
AACCTACTCTTATGATGCGCGAGCTCGAGTCCATCCTGGCCTCCCTCCTC
ACACAGGGTCTGATGCGTGGATTCCTGACTCATAAGAATCCTCGTCTGGC
GATCCCTGGCGCGCGTCTCCGTGGTGCCGTGCCGACTGGCTTTCCCAATG
TCTGGCAGACAATCCTAGCTCGGGAACAAGAAGATGACAACGTTCCTGGA
TGGGTCCAGCCACCAGCGGTGGCAGCACCTCCGACAGCCGGAGGTGGACG
CGTGGTCAATCTGTCCGGGGCGAGACCTGTCGGAGTACAGTGACCAATGT
GTACTGGCATTAGGTGACAGCCAAATGGGAGTTATAGTCCTCCCCACCGT
CTTGTACCTCTCGAAAGTCCTTGCAAAGCTGGCCATGGGCCTCGATCGAC
GTCCTGACTTAATCGCCCACCTGCTGCGACTCGAAGGCCGGTCGAACCAG
GAAGAAGCTACGGAAAAAGTGACGCTGGTGGAGAAATCTGCAAATGTCGT
TCGAGAGGCATTCATTAAGTGCCTAACGGACAGAAGTGGCACGCCAGGTA
TCCACGGAAAGCCCGAAGGGAAGAGGATAGGGATCTATTTGATGGCAAAC
CTTTGCCTGAAACTGCTTTTCCAAATGGCTACGCCGACTCTGGACCGTTT
CTTCGCCAGCATCGCTGACCTGGTCAAGGCTCGAGATGGGCGCCAACTTC
AAGACTATCTGCAGCTCGAGCCTCCCTTGCCCGATATTTATCGACAAATG
GTGGAGGAATTGCGGCAACATTATCCGACCGGTCCTAAAGAGACAGAGCT
AATGCGACGATGCGAAACCCTCGTTCCTAAAACCAAAGGCGCCCCATGGA
CCGCTTTTCCTACCTTTATGAAGCTATACTTTACCTTTCTACGCGATGTC
AACTTGGACAACCTGCTCGAAACATACGATCTCCTCAAAGGACTATTGAA
TGCGGCAAACTCCGAAACGCAGAGCAAATGTTTGCGAGTATCAGCGCACA
ATCCCCTCCTCTGAAACATTTCCCAGCTTCGCAGCGCGTCACCTATTTAT
ACTACCTCGGACGTTATCTGTTCTCCAACAACCTCTTTTATCCCGCCCAG
ATCGCCCTGCAAGCTTCTTACGATCAATGCCACCGCCAGGCGACGAATCA
AAAACGAGTCATCCTGACCTACCTCATCCCTTGTAACATCATACTAGGGC
GCTTCCCCTCATTACAGTTATTGCAACGTCCTGAGGCCGAAGGGCTAGTA
GACAAATTCGTTCCGATTTGTCGGTTAATTGCTCGGGGCGATTATATTGC
GTTTCGCGAGCACCTTGCAATCGGCTCCCCCGAAACAGAATGGTTCGCTC
GGAAAGGCATCCTTCTTGCCCTACGCAATCGGTGCGAGATTCTTGTTTGG
CGGTCACTTGCACGAAAGGTCTTCATCCATGCCGGTTTCCACGGCGATCC
TTCACTTGGCCCTTCTCAACGTGGACCGCCACCGTACCTCTATCTGAACA
AGCTGGACACCGCGGTCCGGTGGATTCAATCTCAGCATGCCCATTCGGGC
CAAAGCTCAATTGGAATCTTCGCCTCCAAGCCCGAGCCGGATTCCCAGGC
GGGCCAAAATCAGGTTGGGTCCCAGATCGTACACAAAGCTACAGATCGGG
ATTTCGAGGGGCTCAGCGAGCTGGACGCACAAGAGGCGGTCGCAAGCCCA
GGGCTTATTGAGAAATACGGAGACTATTTGGCACCGGACGGATATTTCGA
TGCGCAAGGACAGTGGCAGCTAAACCCACCGGGCAGACTTGTTGATGGCC
AGCCCCCTGTCGATTACCAGCAATATGAGCTTGACCCGTACGCGAGTCCA
GCCGACAGCGAGCAAGACTCGGGCAAACCTACTCTTATGATGCGCGAGCT
CGAGTCCATCCTGGCCTCCCTCCTCACACAGGGTCTGATGCGTGGATTCC
TGACTCATAAGAATCCTCGTCTGGCGATCCCTGGCGCGCGTCTCCGTGGT
GCCGTGCCGACTGGCTTTCCCAATGTCTGGCAGACAATCCTAGCTCGGGA
ACAAGAAGATGACAACGTTCCTGGATGGGTCCAGCCACCAGCGGTGGCAG
CACCTCCGACAGCCGGAGGTGGACGCGTGGTCAATCTGTCCGGGGCGAGA
CCTGTCGGAGTACAGTGACCAATGTGTACTGGCATTAGGTGACAGCCAAA
TGGGAGTTATAGTCCTCCCCACCGTCTTGTACCTCTCGAAAGTCCTTGCA
AAGCTGGCCATGGGCCTCGATCGACGTCCTGACTTAATCGCCCACCTGCT
GCGACTCGAAGGCCGGTCGAACCAGGAAGAAGCTACGGAAAAAGTGACGC
TGGTGGAGAAATCTGCAAATGTCGTTCGAGAGGCATTCATTAAGTGCCTA
ACGGACAGAAGTGGCACGCCAGGTATCCACGGAAAGCCCGAAGGGAAGAG
GATAGGGATCTATTTGATGGCAAACCTTTGCCTGAAACTGCTTTTCCAAA
TGGCTACGCCGACTCTGGACCGTTTCTTCGCCAGCATCGCTGACCTGGTC
AAGGCTCGAGATGGGCGCCAACTTCAAGACTATCTGCAGCTCGAGCCTCC
CTTGCCCGATATTTATCGACAAATGGTGGAGGAATTGCGGCAACATTATC
CGACCGGTCCTAAAGAGACAGAGCTAATGCGACGATGCGAAACCCTCGTT
CCTAAAACCAAAGGCGCCCCATGGACCGCTTTTCCTACCTTTATGAAGCT
ATACTTTACCTTTCTACGCGATGTCAACTTGGACAACCTGCTCGAAACAT
ACGATCTCCTCAAAGGACTATTGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012450-T1.utr3p1 | KJC3_012450-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012450-T1.utr5p1 | KJC3_012450-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch8 | supercontig | ch8:3605826..3608998 - |
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