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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3618340..3620544- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012455-T1 ID=KJC3_012455-T1|Name=KJC3_012455-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2205bp|location=Sequence derived from alignment at ch8:3618340..3620544- (Aspergillus niger KJC3) ATGACTTCTACCCGCCGCAACGGGCAGGCTCTGCCATGCGAGCCCTGCCG
CAAAGCCAAAATCCGCTGCGATGGTGCCACCCCAACATGCCAGAATTGCG
TCCGTCGTAACAAGGGAGACAGCTGTGCTTACACGCCCGTTCCGGCTTCT
CGTACCTGGTACTCGGACAATGCTCCCTCGCCCACCGCATCACCTCGTCC
CCAAACAGCCCAACCCCGCCCCGACTCCGCTGCTCTCCAGAATCGAGCCT
CCTTCAACGCCGGCGACGACAAATTATCTTTCGATTTCGCCACCAATAAT
TCAGCGACCTTTAGCGACATCGGCGACCAATTCAAACGCTCCCTGGTCAT
TGATGCGCCCTCCGCGGCTCGGCCCGATACGAAGCAGATCCAGCTTGGCG
CTCGACTGCTCACCTTACTGTTTGAGCATTTCGCACTGTATGAGCGACTG
TCTGAAACGGCCGTCGAGGTCTGGCCCGAGGGATGTGTCCTGGGTCATCG
GCTGGTGAGCGGGATGTTTGAGGCGTTGGAGGATTTGCATGGGTCGCTGG
CTGCGGATGCGAAGGACTTGCAGTCGAGTTTGCTTCGCTGGTCGCAAAAG
ATCTTTGAGGATAGTTCTAAGCCACTGGCTGTTCAGCCAACTATGTCGCC
GGATGACTATATTCGTCGGATTTCCGGACGGTGGGAGGGTATCGGACTGG
TGTTTACGATCGTTGGTCAGGGCGCTATGCTTGAGCGGGATTGGAGGTCT
ATCCGTTCGAGTGAGGCTAATGTGCCGAGGGATCAGAAGTCACTTGCCGC
TCAGGCTATTAGTGCGAGTGATGCTTGTTTGCAATTTTGTGATCTCTCTA
CGGCTGTCAATGATCCGTTGGGGTGGTTGCTTTTTCAGCACATTCATCTT
TTGACGTTGGTGTGTGGGGAGAATGGTATGTGTTTGTTTGGTCTCTTTTT
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTATTGGGGGACTGTGCTAATC
AGGATATAGATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGACGACA
GTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCGTTCTT
CTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATTGACA
AGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCGCTAC
TACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTGGCGGA
GCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGGCTGGA
ACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCTTCTT
ATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGACGTAT
TGAGGATTTGCCGCGCAAAGTCCAGTAAGTGTGCCGCAACAGGTATTTGA
GGACTGCGGATCGGAGCTAATGTGCATTATAGGGAGGTTTCGCAGCAATC
TCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCGAGTG
ATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTAATTTC
CTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCACAAAG
CGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCACGATCC
TGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACAATGTT
GGATATAATGTGCGTGCTGTCACCCCTTCGCTTCCTGCACTTCCTGCACT
TTCGTACTTACCTATCTTTAGGCTGCGTCTTTCGGTGTCCCAGCAGCCGG
CGTCTTAGCAATCGAGCTGCTCTGCCAAGCCGAATCCCAGTCCCAGCTTC
CCGCCAGCGTCTTCCGGCGATCGGAAGTCATCCAAAAACTGACTGTCTTC
GCTTCGCACCTGCAGTATGTTGTCCGCCCGCACGATGGCATGTATGAGGT
CTGTCAGCGCGCGCGAAGGGTCATCTCGAGTATCCTGGATCGCATCCTAT
CGGTCAATCCTCCCGCACTGCCGGCTACTCTGCCGCCCGATGTTCTGGCA
ACCAACTGGTTGAACGGAGAGATTGTTGTTCTGGACGATGGAACCGATCT
TTTCCGCTGGATTGACAGCGCGTCTGACACCTCGCGAAGAGGTTCCTGGG
CTTGA back to topCoding sequence (CDS) from alignment at ch8:3618340..3620544- >KJC3_012455-T1 ID=KJC3_012455-T1|Name=KJC3_012455-T1|organism=Aspergillus niger KJC3|type=CDS|length=8004bp|location=Sequence derived from alignment at ch8:3618340..3620544- (Aspergillus niger KJC3) GCTGCGTCTTTCGGTGTCCCAGCAGCCGGCGTCTTAGCAATCGAGCTGCT CTGCCAAGCCGAATCCCAGTCCCAGCTTCCCGCCAGCGTCTTCCGGCGAT CGGAAGTCATCCAAAAACTGACTGTCTTCGCTTCGCACCTGCAGTATGTT GTCCGCCCGCACGATGGCATGTATGAGGTCTGTCAGCGCGCGCGAAGGGT CATCTCGAGTATCCTGGATCGCATCCTATCGGTCAATCCTCCCGCACTGC CGGCTACTCTGCCGCCCGATGTTCTGGCAACCAACTGGTTGAACGGAGAG ATTGTTGTTCTGGACGATGGAACCGATCTTTTCCGCTGGATTGACAGCGC GTCTGACACCTCGCGAAGAGGTTCCTGGGCTTGAGGAGGTTTCGCAGCAA TCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCGAG TGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTAATT TCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCACAA AGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCACGAT CCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACAATG TTGGATATAATATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGACGA CAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCGTTC TTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATTGA CAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCGCT ACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTGGCG GAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGGCTG GAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCTTC TTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGACGT ATTGAGGATTTGCCGCGCAAAGTCCAATGACTTCTACCCGCCGCAACGGG CAGGCTCTGCCATGCGAGCCCTGCCGCAAAGCCAAAATCCGCTGCGATGG TGCCACCCCAACATGCCAGAATTGCGTCCGTCGTAACAAGGGAGACAGCT GTGCTTACACGCCCGTTCCGGCTTCTCGTACCTGGTACTCGGACAATGCT CCCTCGCCCACCGCATCACCTCGTCCCCAAACAGCCCAACCCCGCCCCGA CTCCGCTGCTCTCCAGAATCGAGCCTCCTTCAACGCCGGCGACGACAAAT TATCTTTCGATTTCGCCACCAATAATTCAGCGACCTTTAGCGACATCGGC GACCAATTCAAACGCTCCCTGGTCATTGATGCGCCCTCCGCGGCTCGGCC CGATACGAAGCAGATCCAGCTTGGCGCTCGACTGCTCACCTTACTGTTTG AGCATTTCGCACTGTATGAGCGACTGTCTGAAACGGCCGTCGAGGTCTGG CCCGAGGGATGTGTCCTGGGTCATCGGCTGGTGAGCGGGATGTTTGAGGC GTTGGAGGATTTGCATGGGTCGCTGGCTGCGGATGCGAAGGACTTGCAGT CGAGTTTGCTTCGCTGGTCGCAAAAGATCTTTGAGGATAGTTCTAAGCCA CTGGCTGTTCAGCCAACTATGTCGCCGGATGACTATATTCGTCGGATTTC CGGACGGTGGGAGGGTATCGGACTGGTGTTTACGATCGTTGGTCAGGGCG CTATGCTTGAGCGGGATTGGAGGTCTATCCGTTCGAGTGAGGCTAATGTG CCGAGGGATCAGAAGTCACTTGCCGCTCAGGCTATTAGTGCGAGTGATGC TTGTTTGCAATTTTGTGATCTCTCTACGGCTGTCAATGATCCGTTGGGGT GGTTGCTTTTTCAGCACATTCATCTTTTGACGTTGGTGTGTGGGGAGAAT GGCTGCGTCTTTCGGTGTCCCAGCAGCCGGCGTCTTAGCAATCGAGCTGC TCTGCCAAGCCGAATCCCAGTCCCAGCTTCCCGCCAGCGTCTTCCGGCGA TCGGAAGTCATCCAAAAACTGACTGTCTTCGCTTCGCACCTGCAGTATGT TGTCCGCCCGCACGATGGCATGTATGAGGTCTGTCAGCGCGCGCGAAGGG TCATCTCGAGTATCCTGGATCGCATCCTATCGGTCAATCCTCCCGCACTG CCGGCTACTCTGCCGCCCGATGTTCTGGCAACCAACTGGTTGAACGGAGA GATTGTTGTTCTGGACGATGGAACCGATCTTTTCCGCTGGATTGACAGCG CGTCTGACACCTCGCGAAGAGGTTCCTGGGCTTGAGGAGGTTTCGCAGCA ATCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCGA GTGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTAAT TTCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCACA AAGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCACGA TCCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACAAT GTTGGATATAATATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGACG ACAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCGTT CTTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATTG ACAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCGC TACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTGGC GGAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGGCT GGAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCTT CTTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGACG TATTGAGGATTTGCCGCGCAAAGTCCAATGACTTCTACCCGCCGCAACGG GCAGGCTCTGCCATGCGAGCCCTGCCGCAAAGCCAAAATCCGCTGCGATG GTGCCACCCCAACATGCCAGAATTGCGTCCGTCGTAACAAGGGAGACAGC TGTGCTTACACGCCCGTTCCGGCTTCTCGTACCTGGTACTCGGACAATGC TCCCTCGCCCACCGCATCACCTCGTCCCCAAACAGCCCAACCCCGCCCCG ACTCCGCTGCTCTCCAGAATCGAGCCTCCTTCAACGCCGGCGACGACAAA TTATCTTTCGATTTCGCCACCAATAATTCAGCGACCTTTAGCGACATCGG CGACCAATTCAAACGCTCCCTGGTCATTGATGCGCCCTCCGCGGCTCGGC CCGATACGAAGCAGATCCAGCTTGGCGCTCGACTGCTCACCTTACTGTTT GAGCATTTCGCACTGTATGAGCGACTGTCTGAAACGGCCGTCGAGGTCTG GCCCGAGGGATGTGTCCTGGGTCATCGGCTGGTGAGCGGGATGTTTGAGG CGTTGGAGGATTTGCATGGGTCGCTGGCTGCGGATGCGAAGGACTTGCAG TCGAGTTTGCTTCGCTGGTCGCAAAAGATCTTTGAGGATAGTTCTAAGCC ACTGGCTGTTCAGCCAACTATGTCGCCGGATGACTATATTCGTCGGATTT CCGGACGGTGGGAGGGTATCGGACTGGTGTTTACGATCGTTGGTCAGGGC GCTATGCTTGAGCGGGATTGGAGGTCTATCCGTTCGAGTGAGGCTAATGT GCCGAGGGATCAGAAGTCACTTGCCGCTCAGGCTATTAGTGCGAGTGATG CTTGTTTGCAATTTTGTGATCTCTCTACGGCTGTCAATGATCCGTTGGGG TGGTTGCTTTTTCAGCACATTCATCTTTTGACGTTGGTGTGTGGGGAGAA TGGCTGCGTCTTTCGGTGTCCCAGCAGCCGGCGTCTTAGCAATCGAGCTG CTCTGCCAAGCCGAATCCCAGTCCCAGCTTCCCGCCAGCGTCTTCCGGCG ATCGGAAGTCATCCAAAAACTGACTGTCTTCGCTTCGCACCTGCAGTATG TTGTCCGCCCGCACGATGGCATGTATGAGGTCTGTCAGCGCGCGCGAAGG GTCATCTCGAGTATCCTGGATCGCATCCTATCGGTCAATCCTCCCGCACT GCCGGCTACTCTGCCGCCCGATGTTCTGGCAACCAACTGGTTGAACGGAG AGATTGTTGTTCTGGACGATGGAACCGATCTTTTCCGCTGGATTGACAGC GCGTCTGACACCTCGCGAAGAGGTTCCTGGGCTTGAGGAGGTTTCGCAGC AATCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCCG AGTGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTAA TTTCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCAC AAAGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCACG ATCCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACAA TGTTGGATATAATATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGAC GACAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCGT TCTTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTATT GACAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGCG CTACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTGG CGGAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGGC TGGAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCCT TCTTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGAC GTATTGAGGATTTGCCGCGCAAAGTCCAATGACTTCTACCCGCCGCAACG GGCAGGCTCTGCCATGCGAGCCCTGCCGCAAAGCCAAAATCCGCTGCGAT GGTGCCACCCCAACATGCCAGAATTGCGTCCGTCGTAACAAGGGAGACAG CTGTGCTTACACGCCCGTTCCGGCTTCTCGTACCTGGTACTCGGACAATG CTCCCTCGCCCACCGCATCACCTCGTCCCCAAACAGCCCAACCCCGCCCC GACTCCGCTGCTCTCCAGAATCGAGCCTCCTTCAACGCCGGCGACGACAA ATTATCTTTCGATTTCGCCACCAATAATTCAGCGACCTTTAGCGACATCG GCGACCAATTCAAACGCTCCCTGGTCATTGATGCGCCCTCCGCGGCTCGG CCCGATACGAAGCAGATCCAGCTTGGCGCTCGACTGCTCACCTTACTGTT TGAGCATTTCGCACTGTATGAGCGACTGTCTGAAACGGCCGTCGAGGTCT GGCCCGAGGGATGTGTCCTGGGTCATCGGCTGGTGAGCGGGATGTTTGAG GCGTTGGAGGATTTGCATGGGTCGCTGGCTGCGGATGCGAAGGACTTGCA GTCGAGTTTGCTTCGCTGGTCGCAAAAGATCTTTGAGGATAGTTCTAAGC CACTGGCTGTTCAGCCAACTATGTCGCCGGATGACTATATTCGTCGGATT TCCGGACGGTGGGAGGGTATCGGACTGGTGTTTACGATCGTTGGTCAGGG CGCTATGCTTGAGCGGGATTGGAGGTCTATCCGTTCGAGTGAGGCTAATG TGCCGAGGGATCAGAAGTCACTTGCCGCTCAGGCTATTAGTGCGAGTGAT GCTTGTTTGCAATTTTGTGATCTCTCTACGGCTGTCAATGATCCGTTGGG GTGGTTGCTTTTTCAGCACATTCATCTTTTGACGTTGGTGTGTGGGGAGA ATGGCTGCGTCTTTCGGTGTCCCAGCAGCCGGCGTCTTAGCAATCGAGCT GCTCTGCCAAGCCGAATCCCAGTCCCAGCTTCCCGCCAGCGTCTTCCGGC GATCGGAAGTCATCCAAAAACTGACTGTCTTCGCTTCGCACCTGCAGTAT GTTGTCCGCCCGCACGATGGCATGTATGAGGTCTGTCAGCGCGCGCGAAG GGTCATCTCGAGTATCCTGGATCGCATCCTATCGGTCAATCCTCCCGCAC TGCCGGCTACTCTGCCGCCCGATGTTCTGGCAACCAACTGGTTGAACGGA GAGATTGTTGTTCTGGACGATGGAACCGATCTTTTCCGCTGGATTGACAG CGCGTCTGACACCTCGCGAAGAGGTTCCTGGGCTTGAGGAGGTTTCGCAG CAATCTCATAAGACATGGAACGACCTGCCTGGCTTCCTCCGCTGGCGCCC GAGTGATCCGGACACCAACGATAGCAGCGTTCTCGTTCCATTGTATCTTA ATTTCCTCTACAATGACTTCCTCCTCTACCGCGTTCTCGTGCGCCGGGCA CAAAGCGGATCCGAGGGCTTGGTCAGTGTGTCACAAAACATTCTCAGCAC GATCCTGGAGCTTATCGGCAAGGAGATCGGCTCGAGAACAGGAACTTACA ATGTTGGATATAATATCCTCGGGCTTGGAGAAGGCTGGCCGATCTTTCGA CGACAGTGTTTACGCTCAGTCATAATGCGCCTGAGGAGAAACGTATTCCG TTCTTCTTGCTTGAACTCCGCAAGCGACTAGTTGCCGGGGCTTACAGTAT TGACAAGCAGCTGGCAACCTTCTTGGGAAGGCCTCCTCAGATCAGCTGGC GCTACTACGATGTGCAGTTTCCTCTAGATTTGAGTTACGAAGAGATACTG GCGGAGCCAAAGGTCCGCGAGGCTGCCATCAGCCTACTTGACAAGACTGG CTGGAACACCCAGGGTATTGTGGGACAGGCTGCGTGGATGCGCATCGCCC TTCTTATTGGATCTACGAGAGAGCAGATCCTAGAGCTGTCTCTGAGCCGA CGTATTGAGGATTTGCCGCGCAAAGTCCAATGACTTCTACCCGCCGCAAC GGGCAGGCTCTGCCATGCGAGCCCTGCCGCAAAGCCAAAATCCGCTGCGA TGGTGCCACCCCAACATGCCAGAATTGCGTCCGTCGTAACAAGGGAGACA GCTGTGCTTACACGCCCGTTCCGGCTTCTCGTACCTGGTACTCGGACAAT GCTCCCTCGCCCACCGCATCACCTCGTCCCCAAACAGCCCAACCCCGCCC CGACTCCGCTGCTCTCCAGAATCGAGCCTCCTTCAACGCCGGCGACGACA AATTATCTTTCGATTTCGCCACCAATAATTCAGCGACCTTTAGCGACATC GGCGACCAATTCAAACGCTCCCTGGTCATTGATGCGCCCTCCGCGGCTCG GCCCGATACGAAGCAGATCCAGCTTGGCGCTCGACTGCTCACCTTACTGT TTGAGCATTTCGCACTGTATGAGCGACTGTCTGAAACGGCCGTCGAGGTC TGGCCCGAGGGATGTGTCCTGGGTCATCGGCTGGTGAGCGGGATGTTTGA GGCGTTGGAGGATTTGCATGGGTCGCTGGCTGCGGATGCGAAGGACTTGC AGTCGAGTTTGCTTCGCTGGTCGCAAAAGATCTTTGAGGATAGTTCTAAG CCACTGGCTGTTCAGCCAACTATGTCGCCGGATGACTATATTCGTCGGAT TTCCGGACGGTGGGAGGGTATCGGACTGGTGTTTACGATCGTTGGTCAGG GCGCTATGCTTGAGCGGGATTGGAGGTCTATCCGTTCGAGTGAGGCTAAT GTGCCGAGGGATCAGAAGTCACTTGCCGCTCAGGCTATTAGTGCGAGTGA TGCTTGTTTGCAATTTTGTGATCTCTCTACGGCTGTCAATGATCCGTTGG GGTGGTTGCTTTTTCAGCACATTCATCTTTTGACGTTGGTGTGTGGGGAG AATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0003677 | DNA binding |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | InterPro:IPR007219 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:3618340..3620544 - |
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