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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3628190..3630736- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012459-T1 ID=KJC3_012459-T1|Name=KJC3_012459-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2547bp|location=Sequence derived from alignment at ch8:3628190..3630736- (Aspergillus niger KJC3)
ATTAAAAGAAAAGTGACGCGCGCAGAACCATCCATCAGTTTGCCATTTGG
GAAGGAAAAAATAATGTGAAAGTGCCGATTGCACTCCAACCTGCCTCATC
CCATCACCATGCCACTGACCTTGCTCTCCCTCGTCTTCTTTCGTAAGATC
TGGGATCGGGTGTGACGCGTTGTGATCGTGGCTGGAGAATATTAATGCTT
TACCCCGCCGGGCCTTCAATAGAAACAATAGGGACTTTCCCCTCCACCTT
CATTGTTGTCGGTGTCCACCTCCTCATTTCTTCCCATCTCTTCTCATCGC
CTTCTATATATTCTCCTTCGCGCCCTCTGCTCTTGCCTCTTTAAGCATCT
CAGGAGTCTCAAGCATTTCAAGCATCGCAAGCATCGCAAGCGTCTCAAGC
ATCTCAATCATCTCAATCATCTATCAGACATAGAACTTCTGCGGTCATGG
GGAAATTCCCTGCGGCCATCATCGTCGCCAGGTATATCCACTTTTTCTTT
TGATACAACATCGAGAGCTAACTCCTTATCTTTGTTCAGACATGGCGCTC
GCTTGGATGTAGCGGACAAGAATTGGCATCTCACTTCACCTACCCCCTAT
GACCCTCCCCTCTCCTATGGCGGTTGGCTACAGTCGCGGGCTCTGGGGGC
TCGCATCATCGAGGCTATCCAGTCTTTGGACGACTCACCAGACTCCACAA
CACAAGGAGATAACAGTGTCAAGTCGCCTTCCGACCGTCTACAAAAGCCA
AAACCGAAGCGCAGAATCATCATTCACACATCTCCCTTCACTCGATGTCT
ACAGACAGCCATCGCGGTCAGCTCAGGGATCTGTCAGAATTCGGGCGAGC
CAGAGTTCAACCAGCTATCGAAGGTTCCCGGCTTAGTTCAGTCAAATTCG
GATTCCGCCTTGACCCCAGGTCCCATTACATCAAGCGACCATCGATGTCT
GCTACGGGTGGATGCCTTCCTTGGAGAATGGCTTTGCCCTAGATACTTTG
ACGAGATTATCCCGCCGCCAAACTCGGATCGCATGATTACTGCTGCAAAG
CTCGAGCTGCTGCGTCGCGAACATAATTTCGTTCCCGAGGCGGACATCGT
CCCCAGACCCTCCGCTGGCTTTTTCCCTGGTGGCTGGGGAAGTGCATCTA
CTCCGGTTTCTCCCGCCAATGATGTGACAGCGAAGTTAAAGACGGAGGCC
CCACCCAGTACACGTCAGACGCAGGCACAAAGGTCCCGCGCTGGCAGCTG
TGACACGTTCAGCGCTGCTGAAACGACTCGCGGACGGCGGCTGCTCAGCA
AGATCAACACAAACCTTCCCTCCATTCCGGATGCCGCCTACGTGCCTCCA
ACGCCCAGCTATGCGATTTCCCCGTCGGACCCCATTCCAGCTGGGTATGT
AACGCATGCTCGGGACGCCTGCGTGAAGATCGATTTCCAATGGGACAGTA
TGCACGGGGAGCAGAACTGGGGTGATGGAGGCCAGTACGGCGAAGAATGG
AGTACGATGCATACGCGGTTCAGCACCGGGCTCGACCGCATGATTGCGTG
GTATCGAGACTACGAGTCAACTTCTTCCGGTCGGCCTCGACGACATTCTC
AGATGCTCGACAGTTCTAGCGAGGCCAGTTCCCGTAATGAATCGGATGAC
GATACGGAGACGATTTTGGTCCTCATTACGCACGGGGCGGGTTGCAATGC
ACTGGTCTCAGCGCTGTCCGGGGAGCAATCCCAAGTAAATTTCGGCACTG
CATCTCTCACCTTGGCGGTCCGCAATGATCACATGCCCGAAATGGTTCAA
GATAATACTATTGGCGGACCAGTTCAGACGAAGGGGGCCAACGAGCCAGC
CAGCGTGGAGAATTATGCCATGAAAATGGTGGCTTCAACCGAGCATCTCC
GCATCGCTGGCAGCACGTCACGTGTCTCTTCTCCGAGCCAGGTGACCTCC
CCCTCAATCTCGTCCTACCGGAACCGCCTAGCAAACCGCCCATCCATGTC
ACAAGGCATGTTCATCATCGGACCCTCGTCGACATCTGGCCCCGGCACTG
TTCCTTGGAATGCCGAGCGACCCTCTACGGCTGTCACTCCTAGGACCCCC
GGGCTTTGGGGGTCCAGCGCCGCCGATGGCCCAGAGGACGATATCGTGCC
CAACTTTGGCTGGCCTGCCCCGGCGCCATCGGTGCCTGGGGAAAGCTCGC
TGCCGGCCAAGGTGGAGGAGCCGACCTCTGCCAAACAAGTGCCACAGCGA
ACGCTCTCCCAGCGCGGACTTTGGGGGAGCGCACCGCTCAGCAAGGACCG
TGAAGCAGGACACAAGCGTCGCTGGACTGTGACTGAACGACGGCCATGAT
GATACCCGCTTAAAATAACATATTTTGTAACTTTCGGATTTATTTCTTAG
GCGTGGAGTTTGGGACAAGGCCATCTAGCTAGATTGCATAGTATTTGGGT
GTGACATAGCGGTTCCTAGCTGACAGGAGTTGATGAATATACCCACTTGC
TCTTCAAGATAACAAGTTATTCAATGATCATCTATCGCATACTGCAT back to topCoding sequence (CDS) from alignment at ch8:3628190..3630736- >KJC3_012459-T1 ID=KJC3_012459-T1|Name=KJC3_012459-T1|organism=Aspergillus niger KJC3|type=CDS|length=3690bp|location=Sequence derived from alignment at ch8:3628190..3630736- (Aspergillus niger KJC3)
ACATGGCGCTCGCTTGGATGTAGCGGACAAGAATTGGCATCTCACTTCAC
CTACCCCCTATGACCCTCCCCTCTCCTATGGCGGTTGGCTACAGTCGCGG
GCTCTGGGGGCTCGCATCATCGAGGCTATCCAGTCTTTGGACGACTCACC
AGACTCCACAACACAAGGAGATAACAGTGTCAAGTCGCCTTCCGACCGTC
TACAAAAGCCAAAACCGAAGCGCAGAATCATCATTCACACATCTCCCTTC
ACTCGATGTCTACAGACAGCCATCGCGGTCAGCTCAGGGATCTGTCAGAA
TTCGGGCGAGCCAGAGTTCAACCAGCTATCGAAGGTTCCCGGCTTAGTTC
AGTCAAATTCGGATTCCGCCTTGACCCCAGGTCCCATTACATCAAGCGAC
CATCGATGTCTGCTACGGGTGGATGCCTTCCTTGGAGAATGGCTTTGCCC
TAGATACTTTGACGAGATTATCCCGCCGCCAAACTCGGATCGCATGATTA
CTGCTGCAAAGCTCGAGCTGCTGCGTCGCGAACATAATTTCGTTCCCGAG
GCGGACATCGTCCCCAGACCCTCCGCTGGCTTTTTCCCTGGTGGCTGGGG
AAGTGCATCTACTCCGGTTTCTCCCGCCAATGATGTGACAGCGAAGTTAA
AGACGGAGGCCCCACCCAGTACACGTCAGACGCAGGCACAAAGGTCCCGC
GCTGGCAGCTGTGACACGTTCAGCGCTGCTGAAACGACTCGCGGACGGCG
GCTGCTCAGCAAGATCAACACAAACCTTCCCTCCATTCCGGATGCCGCCT
ACGTGCCTCCAACGCCCAGCTATGCGATTTCCCCGTCGGACCCCATTCCA
GCTGGGTATGTAACGCATGCTCGGGACGCCTGCGTGAAGATCGATTTCCA
ATGGGACAGTATGCACGGGGAGCAGAACTGGGGTGATGGAGGCCAGTACG
GCGAAGAATGGAGTACGATGCATACGCGGTTCAGCACCGGGCTCGACCGC
ATGATTGCGTGGTATCGAGACTACGAGTCAACTTCTTCCGGTCGGCCTCG
ACGACATTCTCAGATGCTCGACAGTTCTAGCGAGGCCAGTTCCCGTAATG
AATCGGATGACGATACGGAGACGATTTTGGTCCTCATTACGCACGGGGCG
GGTTGCAATGCACTGGTCTCAGCGCTGTCCGGGGAGCAATCCCAAGTAAA
TTTCGGCACTGCATCTCTCACCTTGGCGGTCCGCAATGATCACATGCCCG
AAATGGTTCAAGATAATACTATTGGCGGACCAGTTCAGACGAAGGGGGCC
AACGAGCCAGCCAGCGTGGAGAATTATGCCATGAAAATGGTGGCTTCAAC
CGAGCATCTCCGCATCGCTGGCAGCACGTCACGTGTCTCTTCTCCGAGCC
AGGTGACCTCCCCCTCAATCTCGTCCTACCGGAACCGCCTAGCAAACCGC
CCATCCATGTCACAAGGCATGTTCATCATCGGACCCTCGTCGACATCTGG
CCCCGGCACTGTTCCTTGGAATGCCGAGCGACCCTCTACGGCTGTCACTC
CTAGGACCCCCGGGCTTTGGGGGTCCAGCGCCGCCGATGGCCCAGAGGAC
GATATCGTGCCCAACTTTGGCTGGCCTGCCCCGGCGCCATCGGTGCCTGG
GGAAAGCTCGCTGCCGGCCAAGGTGGAGGAGCCGACCTCTGCCAAACAAG
TGCCACAGCGAACGCTCTCCCAGCGCGGACTTTGGGGGAGCGCACCGCTC
AGCAAGGACCGTGAAGCAGGACACAAGCGTCGCTGGACTGTGACTGAACG
ACGGCCATGAATGGGGAAATTCCCTGCGGCCATCATCGTCGCCAGACATG
GCGCTCGCTTGGATGTAGCGGACAAGAATTGGCATCTCACTTCACCTACC
CCCTATGACCCTCCCCTCTCCTATGGCGGTTGGCTACAGTCGCGGGCTCT
GGGGGCTCGCATCATCGAGGCTATCCAGTCTTTGGACGACTCACCAGACT
CCACAACACAAGGAGATAACAGTGTCAAGTCGCCTTCCGACCGTCTACAA
AAGCCAAAACCGAAGCGCAGAATCATCATTCACACATCTCCCTTCACTCG
ATGTCTACAGACAGCCATCGCGGTCAGCTCAGGGATCTGTCAGAATTCGG
GCGAGCCAGAGTTCAACCAGCTATCGAAGGTTCCCGGCTTAGTTCAGTCA
AATTCGGATTCCGCCTTGACCCCAGGTCCCATTACATCAAGCGACCATCG
ATGTCTGCTACGGGTGGATGCCTTCCTTGGAGAATGGCTTTGCCCTAGAT
ACTTTGACGAGATTATCCCGCCGCCAAACTCGGATCGCATGATTACTGCT
GCAAAGCTCGAGCTGCTGCGTCGCGAACATAATTTCGTTCCCGAGGCGGA
CATCGTCCCCAGACCCTCCGCTGGCTTTTTCCCTGGTGGCTGGGGAAGTG
CATCTACTCCGGTTTCTCCCGCCAATGATGTGACAGCGAAGTTAAAGACG
GAGGCCCCACCCAGTACACGTCAGACGCAGGCACAAAGGTCCCGCGCTGG
CAGCTGTGACACGTTCAGCGCTGCTGAAACGACTCGCGGACGGCGGCTGC
TCAGCAAGATCAACACAAACCTTCCCTCCATTCCGGATGCCGCCTACGTG
CCTCCAACGCCCAGCTATGCGATTTCCCCGTCGGACCCCATTCCAGCTGG
GTATGTAACGCATGCTCGGGACGCCTGCGTGAAGATCGATTTCCAATGGG
ACAGTATGCACGGGGAGCAGAACTGGGGTGATGGAGGCCAGTACGGCGAA
GAATGGAGTACGATGCATACGCGGTTCAGCACCGGGCTCGACCGCATGAT
TGCGTGGTATCGAGACTACGAGTCAACTTCTTCCGGTCGGCCTCGACGAC
ATTCTCAGATGCTCGACAGTTCTAGCGAGGCCAGTTCCCGTAATGAATCG
GATGACGATACGGAGACGATTTTGGTCCTCATTACGCACGGGGCGGGTTG
CAATGCACTGGTCTCAGCGCTGTCCGGGGAGCAATCCCAAGTAAATTTCG
GCACTGCATCTCTCACCTTGGCGGTCCGCAATGATCACATGCCCGAAATG
GTTCAAGATAATACTATTGGCGGACCAGTTCAGACGAAGGGGGCCAACGA
GCCAGCCAGCGTGGAGAATTATGCCATGAAAATGGTGGCTTCAACCGAGC
ATCTCCGCATCGCTGGCAGCACGTCACGTGTCTCTTCTCCGAGCCAGGTG
ACCTCCCCCTCAATCTCGTCCTACCGGAACCGCCTAGCAAACCGCCCATC
CATGTCACAAGGCATGTTCATCATCGGACCCTCGTCGACATCTGGCCCCG
GCACTGTTCCTTGGAATGCCGAGCGACCCTCTACGGCTGTCACTCCTAGG
ACCCCCGGGCTTTGGGGGTCCAGCGCCGCCGATGGCCCAGAGGACGATAT
CGTGCCCAACTTTGGCTGGCCTGCCCCGGCGCCATCGGTGCCTGGGGAAA
GCTCGCTGCCGGCCAAGGTGGAGGAGCCGACCTCTGCCAAACAAGTGCCA
CAGCGAACGCTCTCCCAGCGCGGACTTTGGGGGAGCGCACCGCTCAGCAA
GGACCGTGAAGCAGGACACAAGCGTCGCTGGACTGTGACTGAACGACGGC
CATGAATGGGGAAATTCCCTGCGGCCATCATCGTCGCCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012459-T1.utr3p1 | KJC3_012459-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012459-T1.utr5p1 | KJC3_012459-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029033 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3628190..3630736 - |
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