|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3635422..3637096- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012460-T1 ID=KJC3_012460-T1|Name=KJC3_012460-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1675bp|location=Sequence derived from alignment at ch8:3635422..3637096- (Aspergillus niger KJC3)
ATATAGTCCTCATATCGACCGATCTATCTTGACCTTTTATACTCTAATCA
TTTCTACCTACCTGAGTCTGCATTATGGAATACAACATCCTGATCACTGG
TGTTTCCGGTTATCTCGGAGGAACATTGTTGAATCGGCTAAAGAATGCAC
CCCTCCCAAAATACCACAAGTTATTCGCGCTTATACGGAATCCCGACCAA
GCCCACGCAGTCAAGCAATATGCTGCTGAGCCCTTGGTGTTCGACATCCA
TGATTACGAAAGTGTACTAGACAATATTCAGAAGTATAAAATCAATGTCG
TATTCTCTTTGGTCGATGCATACAGCTCTACATGTCAAGAGCACTTTATA
AGAGCGCTGAGCGAACTGAAGAAAAAGACCGGGCAGGTGGTGCACTTTCT
GCATGTAAGTATCCCTGCCGATTCCTGTTAACTTAACTAATGCTTGCCAG
ACCAGTGGAGCCAAGGCTTTTTCTGATCATGCGGGTGCTCCCGTTGATAG
GACCATTCTTGATACTGAGCATAGTCTGCTTGAACTGCAGAAGTCGCAAC
ACACCGATCTCCCCGCATTACAACAGGTATATCATGTTTGTTTTGCTTAT
ATACCTCTGTGTCTGACTAGTACAGCTTGTGGGTGCCAACACGAAGATTG
TTGAGCTGAGCGAAAGTCTGGGTGTTAGAAGCTATATCTTCTGCCCTTGT
ATGGTCTGTAAGTATTGCTTTATTATACTTATCATGCAAGGGACTTCTTT
TAATCATAAGCAGATGGCAAAGGTGAAGGATTCGGCAACCAGGTCTCTAT
TCAGACTGTTGCTATAGTTAGTACTGCTAGGGCTACGGGACACGTCCGCA
ACCTCAACGAGTCCCAACAGGCGGTAAGTGACCTCCCAATAGGCGAGAGA
ATTGTTTTGACCGGTTTTAGTCCTGGCCAGTGTGTCATGTGGTAGATAAT
GCCTTATTGTACATCGCCATTCTTAAGAAAATACTCTCGTCCGAAGACTG
CGACCATGGCCAGGAGGGCTTCTATCTCGCATCCAGCGGCCGGGTTGCCT
GGAAGGATGTTTACGCATCCATCGGGGCTGCTCTGTTCAAACGAGGTCTG
ATAAAAGATAGTGCTGTCCACCCCGCCGATGAGAAGGTGCTTGCCGTAAT
GGCCGAGACACTCAAGTCGTCAACGGATATGGTGGCTCCTCAATTGAGTG
GAGAGTGAGCGTACCTAGACCTCATGTTGAGAACACGAATTAACGAATTG
TAGGTGCACGTTTACGGCCAAGCATGGTTATGAAATCGGATGGAAGCCTT
TGTTCCCGCCGGACCATATTTTTGAAGTCATGGACGAAGAAGTTGATCTT
ATTCTTTCGAGCAACGCAGATAAATCCGAAAGGACACAGAGAAATGGTGC
TTTCTAATGGTGCTTTCTAATGGTGCTTTCTAATGGTGCTTTCTAATGGT
GCTGCTTGGAAAGTTAGCACATGACCATAGCGACCGTGCCTTCCTCTGTT
TTCGCAAACCGATTCCTGATCATGTCAGGGCAGGTTGCAGAGGAGATAGG
TCTTATTCGACTTGGGTCGAGAGTCGAATCGTTTGATCAGTCATATCTTT
TGCCATGGAAATCATACCTAGTCATGCAATTTCGTGCGATGCATGGACGG
TTAATTCTTCTGCCTCTCTTGAGAC back to topCoding sequence (CDS) from alignment at ch8:3635422..3637096- >KJC3_012460-T1 ID=KJC3_012460-T1|Name=KJC3_012460-T1|organism=Aspergillus niger KJC3|type=CDS|length=6516bp|location=Sequence derived from alignment at ch8:3635422..3637096- (Aspergillus niger KJC3)
GTGCACGTTTACGGCCAAGCATGGTTATGAAATCGGATGGAAGCCTTTGT
TCCCGCCGGACCATATTTTTGAAGTCATGGACGAAGAAGTTGATCTTATT
CTTTCGAGCAACGCAGATAAATCCGAAAGGACACAGAGAAATGGTGCTTT
CTAATCCTGGCCAGTGTGTCATGTGGTAGATAATGCCTTATTGTACATCG
CCATTCTTAAGAAAATACTCTCGTCCGAAGACTGCGACCATGGCCAGGAG
GGCTTCTATCTCGCATCCAGCGGCCGGGTTGCCTGGAAGGATGTTTACGC
ATCCATCGGGGCTGCTCTGTTCAAACGAGGTCTGATAAAAGATAGTGCTG
TCCACCCCGCCGATGAGAAGGTGCTTGCCGTAATGGCCGAGACACTCAAG
TCGTCAACGGATATGGTGGCTCCTCAATTGAGTGGAGAATGGCAAAGGTG
AAGGATTCGGCAACCAGGTCTCTATTCAGACTGTTGCTATAGTTAGTACT
GCTAGGGCTACGGGACACGTCCGCAACCTCAACGAGTCCCAACAGGCGCT
TGTGGGTGCCAACACGAAGATTGTTGAGCTGAGCGAAAGTCTGGGTGTTA
GAAGCTATATCTTCTGCCCTTGTATGGTCTACCAGTGGAGCCAAGGCTTT
TTCTGATCATGCGGGTGCTCCCGTTGATAGGACCATTCTTGATACTGAGC
ATAGTCTGCTTGAACTGCAGAAGTCGCAACACACCGATCTCCCCGCATTA
CAACAGATGGAATACAACATCCTGATCACTGGTGTTTCCGGTTATCTCGG
AGGAACATTGTTGAATCGGCTAAAGAATGCACCCCTCCCAAAATACCACA
AGTTATTCGCGCTTATACGGAATCCCGACCAAGCCCACGCAGTCAAGCAA
TATGCTGCTGAGCCCTTGGTGTTCGACATCCATGATTACGAAAGTGTACT
AGACAATATTCAGAAGTATAAAATCAATGTCGTATTCTCTTTGGTCGATG
CATACAGCTCTACATGTCAAGAGCACTTTATAAGAGCGCTGAGCGAACTG
AAGAAAAAGACCGGGCAGGTGGTGCACTTTCTGCATGTGCACGTTTACGG
CCAAGCATGGTTATGAAATCGGATGGAAGCCTTTGTTCCCGCCGGACCAT
ATTTTTGAAGTCATGGACGAAGAAGTTGATCTTATTCTTTCGAGCAACGC
AGATAAATCCGAAAGGACACAGAGAAATGGTGCTTTCTAATCCTGGCCAG
TGTGTCATGTGGTAGATAATGCCTTATTGTACATCGCCATTCTTAAGAAA
ATACTCTCGTCCGAAGACTGCGACCATGGCCAGGAGGGCTTCTATCTCGC
ATCCAGCGGCCGGGTTGCCTGGAAGGATGTTTACGCATCCATCGGGGCTG
CTCTGTTCAAACGAGGTCTGATAAAAGATAGTGCTGTCCACCCCGCCGAT
GAGAAGGTGCTTGCCGTAATGGCCGAGACACTCAAGTCGTCAACGGATAT
GGTGGCTCCTCAATTGAGTGGAGAATGGCAAAGGTGAAGGATTCGGCAAC
CAGGTCTCTATTCAGACTGTTGCTATAGTTAGTACTGCTAGGGCTACGGG
ACACGTCCGCAACCTCAACGAGTCCCAACAGGCGCTTGTGGGTGCCAACA
CGAAGATTGTTGAGCTGAGCGAAAGTCTGGGTGTTAGAAGCTATATCTTC
TGCCCTTGTATGGTCTACCAGTGGAGCCAAGGCTTTTTCTGATCATGCGG
GTGCTCCCGTTGATAGGACCATTCTTGATACTGAGCATAGTCTGCTTGAA
CTGCAGAAGTCGCAACACACCGATCTCCCCGCATTACAACAGATGGAATA
CAACATCCTGATCACTGGTGTTTCCGGTTATCTCGGAGGAACATTGTTGA
ATCGGCTAAAGAATGCACCCCTCCCAAAATACCACAAGTTATTCGCGCTT
ATACGGAATCCCGACCAAGCCCACGCAGTCAAGCAATATGCTGCTGAGCC
CTTGGTGTTCGACATCCATGATTACGAAAGTGTACTAGACAATATTCAGA
AGTATAAAATCAATGTCGTATTCTCTTTGGTCGATGCATACAGCTCTACA
TGTCAAGAGCACTTTATAAGAGCGCTGAGCGAACTGAAGAAAAAGACCGG
GCAGGTGGTGCACTTTCTGCATGTGCACGTTTACGGCCAAGCATGGTTAT
GAAATCGGATGGAAGCCTTTGTTCCCGCCGGACCATATTTTTGAAGTCAT
GGACGAAGAAGTTGATCTTATTCTTTCGAGCAACGCAGATAAATCCGAAA
GGACACAGAGAAATGGTGCTTTCTAATCCTGGCCAGTGTGTCATGTGGTA
GATAATGCCTTATTGTACATCGCCATTCTTAAGAAAATACTCTCGTCCGA
AGACTGCGACCATGGCCAGGAGGGCTTCTATCTCGCATCCAGCGGCCGGG
TTGCCTGGAAGGATGTTTACGCATCCATCGGGGCTGCTCTGTTCAAACGA
GGTCTGATAAAAGATAGTGCTGTCCACCCCGCCGATGAGAAGGTGCTTGC
CGTAATGGCCGAGACACTCAAGTCGTCAACGGATATGGTGGCTCCTCAAT
TGAGTGGAGAATGGCAAAGGTGAAGGATTCGGCAACCAGGTCTCTATTCA
GACTGTTGCTATAGTTAGTACTGCTAGGGCTACGGGACACGTCCGCAACC
TCAACGAGTCCCAACAGGCGCTTGTGGGTGCCAACACGAAGATTGTTGAG
CTGAGCGAAAGTCTGGGTGTTAGAAGCTATATCTTCTGCCCTTGTATGGT
CTACCAGTGGAGCCAAGGCTTTTTCTGATCATGCGGGTGCTCCCGTTGAT
AGGACCATTCTTGATACTGAGCATAGTCTGCTTGAACTGCAGAAGTCGCA
ACACACCGATCTCCCCGCATTACAACAGATGGAATACAACATCCTGATCA
CTGGTGTTTCCGGTTATCTCGGAGGAACATTGTTGAATCGGCTAAAGAAT
GCACCCCTCCCAAAATACCACAAGTTATTCGCGCTTATACGGAATCCCGA
CCAAGCCCACGCAGTCAAGCAATATGCTGCTGAGCCCTTGGTGTTCGACA
TCCATGATTACGAAAGTGTACTAGACAATATTCAGAAGTATAAAATCAAT
GTCGTATTCTCTTTGGTCGATGCATACAGCTCTACATGTCAAGAGCACTT
TATAAGAGCGCTGAGCGAACTGAAGAAAAAGACCGGGCAGGTGGTGCACT
TTCTGCATGTGCACGTTTACGGCCAAGCATGGTTATGAAATCGGATGGAA
GCCTTTGTTCCCGCCGGACCATATTTTTGAAGTCATGGACGAAGAAGTTG
ATCTTATTCTTTCGAGCAACGCAGATAAATCCGAAAGGACACAGAGAAAT
GGTGCTTTCTAATCCTGGCCAGTGTGTCATGTGGTAGATAATGCCTTATT
GTACATCGCCATTCTTAAGAAAATACTCTCGTCCGAAGACTGCGACCATG
GCCAGGAGGGCTTCTATCTCGCATCCAGCGGCCGGGTTGCCTGGAAGGAT
GTTTACGCATCCATCGGGGCTGCTCTGTTCAAACGAGGTCTGATAAAAGA
TAGTGCTGTCCACCCCGCCGATGAGAAGGTGCTTGCCGTAATGGCCGAGA
CACTCAAGTCGTCAACGGATATGGTGGCTCCTCAATTGAGTGGAGAATGG
CAAAGGTGAAGGATTCGGCAACCAGGTCTCTATTCAGACTGTTGCTATAG
TTAGTACTGCTAGGGCTACGGGACACGTCCGCAACCTCAACGAGTCCCAA
CAGGCGCTTGTGGGTGCCAACACGAAGATTGTTGAGCTGAGCGAAAGTCT
GGGTGTTAGAAGCTATATCTTCTGCCCTTGTATGGTCTACCAGTGGAGCC
AAGGCTTTTTCTGATCATGCGGGTGCTCCCGTTGATAGGACCATTCTTGA
TACTGAGCATAGTCTGCTTGAACTGCAGAAGTCGCAACACACCGATCTCC
CCGCATTACAACAGATGGAATACAACATCCTGATCACTGGTGTTTCCGGT
TATCTCGGAGGAACATTGTTGAATCGGCTAAAGAATGCACCCCTCCCAAA
ATACCACAAGTTATTCGCGCTTATACGGAATCCCGACCAAGCCCACGCAG
TCAAGCAATATGCTGCTGAGCCCTTGGTGTTCGACATCCATGATTACGAA
AGTGTACTAGACAATATTCAGAAGTATAAAATCAATGTCGTATTCTCTTT
GGTCGATGCATACAGCTCTACATGTCAAGAGCACTTTATAAGAGCGCTGA
GCGAACTGAAGAAAAAGACCGGGCAGGTGGTGCACTTTCTGCATGTGCAC
GTTTACGGCCAAGCATGGTTATGAAATCGGATGGAAGCCTTTGTTCCCGC
CGGACCATATTTTTGAAGTCATGGACGAAGAAGTTGATCTTATTCTTTCG
AGCAACGCAGATAAATCCGAAAGGACACAGAGAAATGGTGCTTTCTAATC
CTGGCCAGTGTGTCATGTGGTAGATAATGCCTTATTGTACATCGCCATTC
TTAAGAAAATACTCTCGTCCGAAGACTGCGACCATGGCCAGGAGGGCTTC
TATCTCGCATCCAGCGGCCGGGTTGCCTGGAAGGATGTTTACGCATCCAT
CGGGGCTGCTCTGTTCAAACGAGGTCTGATAAAAGATAGTGCTGTCCACC
CCGCCGATGAGAAGGTGCTTGCCGTAATGGCCGAGACACTCAAGTCGTCA
ACGGATATGGTGGCTCCTCAATTGAGTGGAGAATGGCAAAGGTGAAGGAT
TCGGCAACCAGGTCTCTATTCAGACTGTTGCTATAGTTAGTACTGCTAGG
GCTACGGGACACGTCCGCAACCTCAACGAGTCCCAACAGGCGCTTGTGGG
TGCCAACACGAAGATTGTTGAGCTGAGCGAAAGTCTGGGTGTTAGAAGCT
ATATCTTCTGCCCTTGTATGGTCTACCAGTGGAGCCAAGGCTTTTTCTGA
TCATGCGGGTGCTCCCGTTGATAGGACCATTCTTGATACTGAGCATAGTC
TGCTTGAACTGCAGAAGTCGCAACACACCGATCTCCCCGCATTACAACAG
ATGGAATACAACATCCTGATCACTGGTGTTTCCGGTTATCTCGGAGGAAC
ATTGTTGAATCGGCTAAAGAATGCACCCCTCCCAAAATACCACAAGTTAT
TCGCGCTTATACGGAATCCCGACCAAGCCCACGCAGTCAAGCAATATGCT
GCTGAGCCCTTGGTGTTCGACATCCATGATTACGAAAGTGTACTAGACAA
TATTCAGAAGTATAAAATCAATGTCGTATTCTCTTTGGTCGATGCATACA
GCTCTACATGTCAAGAGCACTTTATAAGAGCGCTGAGCGAACTGAAGAAA
AAGACCGGGCAGGTGGTGCACTTTCTGCATGTGCACGTTTACGGCCAAGC
ATGGTTATGAAATCGGATGGAAGCCTTTGTTCCCGCCGGACCATATTTTT
GAAGTCATGGACGAAGAAGTTGATCTTATTCTTTCGAGCAACGCAGATAA
ATCCGAAAGGACACAGAGAAATGGTGCTTTCTAATCCTGGCCAGTGTGTC
ATGTGGTAGATAATGCCTTATTGTACATCGCCATTCTTAAGAAAATACTC
TCGTCCGAAGACTGCGACCATGGCCAGGAGGGCTTCTATCTCGCATCCAG
CGGCCGGGTTGCCTGGAAGGATGTTTACGCATCCATCGGGGCTGCTCTGT
TCAAACGAGGTCTGATAAAAGATAGTGCTGTCCACCCCGCCGATGAGAAG
GTGCTTGCCGTAATGGCCGAGACACTCAAGTCGTCAACGGATATGGTGGC
TCCTCAATTGAGTGGAGAATGGCAAAGGTGAAGGATTCGGCAACCAGGTC
TCTATTCAGACTGTTGCTATAGTTAGTACTGCTAGGGCTACGGGACACGT
CCGCAACCTCAACGAGTCCCAACAGGCGCTTGTGGGTGCCAACACGAAGA
TTGTTGAGCTGAGCGAAAGTCTGGGTGTTAGAAGCTATATCTTCTGCCCT
TGTATGGTCTACCAGTGGAGCCAAGGCTTTTTCTGATCATGCGGGTGCTC
CCGTTGATAGGACCATTCTTGATACTGAGCATAGTCTGCTTGAACTGCAG
AAGTCGCAACACACCGATCTCCCCGCATTACAACAGATGGAATACAACAT
CCTGATCACTGGTGTTTCCGGTTATCTCGGAGGAACATTGTTGAATCGGC
TAAAGAATGCACCCCTCCCAAAATACCACAAGTTATTCGCGCTTATACGG
AATCCCGACCAAGCCCACGCAGTCAAGCAATATGCTGCTGAGCCCTTGGT
GTTCGACATCCATGATTACGAAAGTGTACTAGACAATATTCAGAAGTATA
AAATCAATGTCGTATTCTCTTTGGTCGATGCATACAGCTCTACATGTCAA
GAGCACTTTATAAGAGCGCTGAGCGAACTGAAGAAAAAGACCGGGCAGGT
GGTGCACTTTCTGCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012460-T1.utr3p1 | KJC3_012460-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012460-T1.utr5p1 | KJC3_012460-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3635422..3637096 - |
|
