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KJC3_012462-T1, KJC3_012462-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012462-T1
Unique NameKJC3_012462-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3639059..3640141+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012462-T1 ID=KJC3_012462-T1|Name=KJC3_012462-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch8:3639059..3640141+ (Aspergillus niger KJC3)
ATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACCCAGGGTGGTGC
AGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGATTCGGGCGCTCA
CACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTTCCAGAGGGATT
GAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTGGTAAAGGCCTT
TGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTTTGAGCCCTTCG
CAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATCAGCAAGGGGTC
AACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAGCTATACATTTG
GAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGCGGTTGTGGTGC
CCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCAAGCAGGACCAG
GTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTCTATACGTCCAA
CCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGGTAAGTTCGCCCTCCC
CGTGGAACTCTCCTTGTCGCCATGGCAGTAAACTCATTTTAACCCGCATT
GAACAGAATTCGATCGGCAAATTTGTCGCTTTTACTCCAGTGTCTGCACA
GACGAGGATTGCTTCCCTCGGTGCGATGTCTAATGTTGGTACTGCTGTTG
CAGGGCTAGTCGAGAATGATGGGCAGACTTTATGGACCAGCAAACTCGGC
GCTTCATCCAGTGGGGCCAAGTATGTCATCGTAACCACCACTTCTTATAC
TGTCCAGGACTACTACTCCGCATGGGCAAAAGCCATTGGAAAGGGTGAGG
ATCAGGTTAAGGTTCTGCCAATCTCCTTTGCGGACTACGAAGCTCTCTTT
GCGGAGTGGGGAACCGAGTTGGGCCTGATGATGAGATTTTGGGAAGTCGC
TGGGCCTGAGAAAAGCTGGGCTACTGTAGGACAGACTGACACCCTCATCG
ATAGCCGGGAATTGTTGGGGCCTTGCAAGACATTGGTCGAGACGGAGGAA
GCATTTGCTCAAGTCTCGTGGGACAACATATAA
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Coding sequence (CDS) from alignment at ch8:3639059..3640141+

>KJC3_012462-T1 ID=KJC3_012462-T1|Name=KJC3_012462-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch8:3639059..3640141+ (Aspergillus niger KJC3)
ATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACCCAGGGTGGTGC
AGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGATTCGGGCGCTCA
CACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTTCCAGAGGGATT
GAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTGGTAAAGGCCTT
TGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTTTGAGCCCTTCG
CAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATCAGCAAGGGGTC
AACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAGCTATACATTTG
GAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGCGGTTGTGGTGC
CCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCAAGCAGGACCAG
GTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTCTATACGTCCAA
CCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGAATTCGATCGGCAAAT
TTGTCGCTTTTACTCCAGTGTCTGCACAGACGAGGATTGCTTCCCTCGGT
GCGATGTCTAATGTTGGTACTGCTGTTGCAGGGCTAGTCGAGAATGATGG
GCAGACTTTATGGACCAGCAAACTCGGCGCTTCATCCAGTGGGGCCAAGT
ATGTCATCGTAACCACCACTTCTTATACTGTCCAGGACTACTACTCCGCA
TGGGCAAAAGCCATTGGAAAGGGTGAGGATCAGGTTAAGGTTCTGCCAAT
CTCCTTTGCGGACTACGAAGCTCTCTTTGCGGAGTGGGGAACCGAGTTGG
GCCTGATGATGAGATTTTGGGAAGTCGCTGGGCCTGAGAAAAGCTGGGCT
ACTGTAGGACAGACTGACACCCTCATCGATAGCCGGGAATTGTTGGGGCC
TTGCAAGACATTGGTCGAGACGGAGGAAGCATTTGCTCAAGTCTCGTGGG
ACAACATATAAATGCCTAAGATCGTCGCAATTGTCGGTGCAACTGGTACC
CAGGGTGGTGCAGTGATCTCTGCACTGGAGGGTAACCCTTCTTTCCAGAT
TCGGGCGCTCACACGCAATACCAACAGCGAAAAGGCCAAGGATCTCGCTT
CCAGAGGGATTGAAGTGGTAGCTGCGGACCTGAATGACGAATCCAGCCTG
GTAAAGGCCTTTGCCGATGTCAGTATCATCTATGCCGTTACCAATTTCTT
TGAGCCCTTCGCAACGGTCGGGCCTGAGGCAGCCATGGAAATCGAGTATC
AGCAAGGGGTCAACCTCGCCCAGGCTGCGTCTCAGACTCCGAGTCTGGAG
CTATACATTTGGAGTACACTTCCCGACTCGCGCACACTCTCCAGCGGGGC
GGTTGTGGTGCCCCATTTTGCTGCCAAGGCTAGGGTGGATGAGTTCATCA
AGCAGGACCAGGTTTTGTTATCAAAGACGGTTTTCCTCTGGGTGACTTTC
TATACGTCCAACCTCTTCTATCCTCCTTTCGCTCCCGTATATGCGAATTC
GATCGGCAAATTTGTCGCTTTTACTCCAGTGTCTGCACAGACGAGGATTG
CTTCCCTCGGTGCGATGTCTAATGTTGGTACTGCTGTTGCAGGGCTAGTC
GAGAATGATGGGCAGACTTTATGGACCAGCAAACTCGGCGCTTCATCCAG
TGGGGCCAAGTATGTCATCGTAACCACCACTTCTTATACTGTCCAGGACT
ACTACTCCGCATGGGCAAAAGCCATTGGAAAGGGTGAGGATCAGGTTAAG
GTTCTGCCAATCTCCTTTGCGGACTACGAAGCTCTCTTTGCGGAGTGGGG
AACCGAGTTGGGCCTGATGATGAGATTTTGGGAAGTCGCTGGGCCTGAGA
AAAGCTGGGCTACTGTAGGACAGACTGACACCCTCATCGATAGCCGGGAA
TTGTTGGGGCCTTGCAAGACATTGGTCGAGACGGAGGAAGCATTTGCTCA
AGTCTCGTGGGACAACATATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012462KJC3_012462Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012462-T1.exon1KJC3_012462-T1.exon1Aspergillus niger KJC3exon
KJC3_012462-T1.exon2KJC3_012462-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012462-T1.cdsKJC3_012462-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012462-T1KJC3_012462-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3639059..3640141 +
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