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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3641993..3643990+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012463-T2 ID=KJC3_012463-T2|Name=KJC3_012463-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1998bp|location=Sequence derived from alignment at ch8:3641993..3643990+ (Aspergillus niger KJC3)
GAAAGGCAGGGCTACGCAACGGTGGCAACAATGTGGGTCGACGGCAGACA
TCATACTAGGGACTGGTATCTAGACTCTTCATCGACCATTATCTTTCCAT
CGTATATAATGTGAGTGGCCCCCGAGCTCGGCCGCTCGGCCGCATTCTCG
TCCCCGAAACCGTGTCTGCTCGGAGGTGAATGAAAATGTCATCGCAAAGT
GCAGAGGACAGCACCCGTTTAGAGCAAGTCTTAGATGGGTCGACTCCATA
CGACTCCGAGTCCACCCTCAGTCGCGGCGACTTGCAGGAAAAGCCATCCG
AACTCGACGATGAGGACCCCGAGGCCCTGACTCGGCTCGAGACGGCCCAG
TCAGCCGTTAAGCCCCCCTCCGAACTATGGAAAGAGATCATCTTCATCGC
CGTCGTCTGCATGGCTCAATTCATGACCCAAGCCGGTCTATGCATGTCCA
TTGCCCCGGCTCACATCATCGGTGCCAGCTTTGGCACCACCAATGCAGGC
CAGCTCAGTTGGTTTGCTGCAGCCTACAGCTTAACTGTCGGGACCTTCAT
CCTGGTTGCTGGTCGGCTCGGGGACGTCTACGGCCATCGGCTCATGTTTA
TCATCGGCTTCTCCTGGTTCGGTCTCTGGTCTCTCCTGGCCGGCTTCAGC
GTCTGGTCGAATAAGGTCTTTTTCGACTGCTGTCGAGCATTGCAGGGAAT
TGGTCCCGCCATGTTATTGCCGAACGCCATTGCCATTCTGGGACGAGCCT
ATCCTCCCGGTCTGCGCAAGGAGATGATCTTTAGCTGTTTCGGAGCTACA
GCCCCGGGCGGGTTCATCGTCGGAGGTGTCTTCTCCTCCCTCTTTGCTCA
GCTCGTTTGGTGGCCGTGGGCATACTGGGTTATGGGCATGGTGTGCTTTG
TACTGGCAGCGCTCGGTATTCTTGTGATTCCGGTTACCCGTCGCCCGAAG
TTCACAGACGACATGACGGCCTGGACGCGACTAGATATTCTCGGTGCCAT
CACCGGTATCTCGGCCCTGGTCCTGATCAACTTTGCCTGGAACCAGGCTG
CCCTTGTGGGATGGCAGACACCCTACACCTATGCCCTTCTAATTGTCGGA
TTCGTCTTCTTTGGTGTCTTCATTTTTGTTGAACGCTCGGCCCCGTGCCC
CTTGATCCCACGATCAGTCCTCTCCGGTGACCTGGCCTGGGTGCTCGGGT
GCATTGCGGCGGGTTGGTCCAGCTTCGGAATTATCATCTACTACTTCTAT
CAATTCATGGAAGTTATCAAGGGTGACTCCCCACTACTCGCGACCGCTAA
ATGGTCCGCCGCTGCGCCGTCCGGCGCCGTTGCTGCACTGGTTACCGGTT
TCCTGCTGGGAAAGCTACCACCTAGCGTGATCATGTTTTTCGCCATGTGC
TTCTTCACTGCTGGACAAGCCATCTTCGCCACTGCCCCTGTGCATCAGAC
GTACTGGGCGCAGGCGTTTGTCGTTAGTCTGATCACGTCGTGGGGAATGT
ACGTACCGAGTCCAATAACCCCTTCATTTTCGTTACATATATTAACCGAC
AATAGGGACATGTCCTTCCCATCAGGAACACTTATTCTGAGTAACTCGAT
GCACCATCACCACCAGGGTCTGGCAGCGTCGCTTGTCACGACAACAGTCA
ATTATTCTATCTCGCTGGGACTGGGATTCGCCGGTACTGTAGAGTCGAAC
GTCAACGATGGCGGGAAGAATCCCCTGAAGGGATACCGCGGGGCGCTTTA
TCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTGACCTCTATTTGCTTCA
TGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAAGAGTCGACGTGATGT
GGTAATGCTCAATGGTCATGATAAATGGCGTGAGTGCGGAGGCTGCTCGC
TTTGAGCTTCGCTTGTCTGCAAACAAAAAATGTGCTTTAATAGTCTTATA
CCCTACATAGATGAGATGCTTTTTTCTCCGTTAGATATCAATAATATG back to topCoding sequence (CDS) from alignment at ch8:3641993..3643990+ >KJC3_012463-T2 ID=KJC3_012463-T2|Name=KJC3_012463-T2|organism=Aspergillus niger KJC3|type=CDS|length=5013bp|location=Sequence derived from alignment at ch8:3641993..3643990+ (Aspergillus niger KJC3)
ATGTGGGTCGACGGCAGACATCATACTAGGGACTGGTATCTAGACTCTTC
ATCGACCATTATCTTTCCATCGTATATAATTGCAGAGGACAGCACCCGTT
TAGAGCAAGTCTTAGATGGGTCGACTCCATACGACTCCGAGTCCACCCTC
AGTCGCGGCGACTTGCAGGAAAAGCCATCCGAACTCGACGATGAGGACCC
CGAGGCCCTGACTCGGCTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCT
CCGAACTATGGAAAGAGATCATCTTCATCGCCGTCGTCTGCATGGCTCAA
TTCATGACCCAAGCCGGTCTATGCATGTCCATTGCCCCGGCTCACATCAT
CGGTGCCAGCTTTGGCACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTG
CAGCCTACAGCTTAACTGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTC
GGGGACGTCTACGGCCATCGGCTCATGTTTATCATCGGCTTCTCCTGGTT
CGGTCTCTGGTCTCTCCTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCT
TTTTCGACTGCTGTCGAGCATTGCAGGGAATTGGTCCCGCCATGTTATTG
CCGAACGCCATTGCCATTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAA
GGAGATGATCTTTAGCTGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCG
TCGGAGGTGTCTTCTCCTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGG
GCATACTGGGTTATGGGCATGGTGTGCTTTGTACTGGCAGCGCTCGGTAT
TCTTGTGATTCCGGTTACCCGTCGCCCGAAGTTCACAGACGACATGACGG
CCTGGACGCGACTAGATATTCTCGGTGCCATCACCGGTATCTCGGCCCTG
GTCCTGATCAACTTTGCCTGGAACCAGGCTGCCCTTGTGGGATGGCAGAC
ACCCTACACCTATGCCCTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCT
TCATTTTTGTTGAACGCTCGGCCCCGTGCCCCTTGATCCCACGATCAGTC
CTCTCCGGTGACCTGGCCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTC
CAGCTTCGGAATTATCATCTACTACTTCTATCAATTCATGGAAGTTATCA
AGGGTGACTCCCCACTACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCG
TCCGGCGCCGTTGCTGCACTGGTTACCGGTTTCCTGCTGGGAAAGCTACC
ACCTAGCGTGATCATGTTTTTCGCCATGTGCTTCTTCACTGCTGGACAAG
CCATCTTCGCCACTGCCCCTGTGCATCAGACGTACTGGGCGCAGGCGTTT
GTCGTTAGTCTGATCACGTCGTGGGGAATGGACATGTCCTTCCCATCAGG
AACACTTATTCTGAGTAACTCGATGCACCATCACCACCAGGGTCTGGCAG
CGTCGCTTGTCACGACAACAGTCAATTATTCTATCTCGCTGGGACTGGGA
TTCGCCGGTACTGTAGAGTCGAACGTCAACGATGGCGGGAAGAATCCCCT
GAAGGGATACCGCGGGGCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAG
GAATGGTGACCTCTATTTGCTTCATGTCGGTTAGCTGGAGACGTCATCGT
CTGGGGAAAGAGTCGACGTGAATGTGGGTCGACGGCAGACATCATACTAG
GGACTGGTATCTAGACTCTTCATCGACCATTATCTTTCCATCGTATATAA
TTGCAGAGGACAGCACCCGTTTAGAGCAAGTCTTAGATGGGTCGACTCCA
TACGACTCCGAGTCCACCCTCAGTCGCGGCGACTTGCAGGAAAAGCCATC
CGAACTCGACGATGAGGACCCCGAGGCCCTGACTCGGCTCGAGACGGCCC
AGTCAGCCGTTAAGCCCCCCTCCGAACTATGGAAAGAGATCATCTTCATC
GCCGTCGTCTGCATGGCTCAATTCATGACCCAAGCCGGTCTATGCATGTC
CATTGCCCCGGCTCACATCATCGGTGCCAGCTTTGGCACCACCAATGCAG
GCCAGCTCAGTTGGTTTGCTGCAGCCTACAGCTTAACTGTCGGGACCTTC
ATCCTGGTTGCTGGTCGGCTCGGGGACGTCTACGGCCATCGGCTCATGTT
TATCATCGGCTTCTCCTGGTTCGGTCTCTGGTCTCTCCTGGCCGGCTTCA
GCGTCTGGTCGAATAAGGTCTTTTTCGACTGCTGTCGAGCATTGCAGGGA
ATTGGTCCCGCCATGTTATTGCCGAACGCCATTGCCATTCTGGGACGAGC
CTATCCTCCCGGTCTGCGCAAGGAGATGATCTTTAGCTGTTTCGGAGCTA
CAGCCCCGGGCGGGTTCATCGTCGGAGGTGTCTTCTCCTCCCTCTTTGCT
CAGCTCGTTTGGTGGCCGTGGGCATACTGGGTTATGGGCATGGTGTGCTT
TGTACTGGCAGCGCTCGGTATTCTTGTGATTCCGGTTACCCGTCGCCCGA
AGTTCACAGACGACATGACGGCCTGGACGCGACTAGATATTCTCGGTGCC
ATCACCGGTATCTCGGCCCTGGTCCTGATCAACTTTGCCTGGAACCAGGC
TGCCCTTGTGGGATGGCAGACACCCTACACCTATGCCCTTCTAATTGTCG
GATTCGTCTTCTTTGGTGTCTTCATTTTTGTTGAACGCTCGGCCCCGTGC
CCCTTGATCCCACGATCAGTCCTCTCCGGTGACCTGGCCTGGGTGCTCGG
GTGCATTGCGGCGGGTTGGTCCAGCTTCGGAATTATCATCTACTACTTCT
ATCAATTCATGGAAGTTATCAAGGGTGACTCCCCACTACTCGCGACCGCT
AAATGGTCCGCCGCTGCGCCGTCCGGCGCCGTTGCTGCACTGGTTACCGG
TTTCCTGCTGGGAAAGCTACCACCTAGCGTGATCATGTTTTTCGCCATGT
GCTTCTTCACTGCTGGACAAGCCATCTTCGCCACTGCCCCTGTGCATCAG
ACGTACTGGGCGCAGGCGTTTGTCGTTAGTCTGATCACGTCGTGGGGAAT
GGACATGTCCTTCCCATCAGGAACACTTATTCTGAGTAACTCGATGCACC
ATCACCACCAGGGTCTGGCAGCGTCGCTTGTCACGACAACAGTCAATTAT
TCTATCTCGCTGGGACTGGGATTCGCCGGTACTGTAGAGTCGAACGTCAA
CGATGGCGGGAAGAATCCCCTGAAGGGATACCGCGGGGCGCTTTATCTTG
GCATAGGCCTTGCTGGGTTAGGAATGGTGACCTCTATTTGCTTCATGTCG
GTTAGCTGGAGACGTCATCGTCTGGGGAAAGAGTCGACGTGAATGTGGGT
CGACGGCAGACATCATACTAGGGACTGGTATCTAGACTCTTCATCGACCA
TTATCTTTCCATCGTATATAATTGCAGAGGACAGCACCCGTTTAGAGCAA
GTCTTAGATGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGG
CGACTTGCAGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCC
TGACTCGGCTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTA
TGGAAAGAGATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGAC
CCAAGCCGGTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCA
GCTTTGGCACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTAC
AGCTTAACTGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGT
CTACGGCCATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCT
GGTCTCTCCTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGAC
TGCTGTCGAGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGC
CATTGCCATTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGA
TCTTTAGCTGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGT
GTCTTCTCCTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTG
GGTTATGGGCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGA
TTCCGGTTACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACG
CGACTAGATATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGAT
CAACTTTGCCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACA
CCTATGCCCTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTT
GTTGAACGCTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGG
TGACCTGGCCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCG
GAATTATCATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGAC
TCCCCACTACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGC
CGTTGCTGCACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCG
TGATCATGTTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTC
GCCACTGCCCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAG
TCTGATCACGTCGTGGGGAATGGACATGTCCTTCCCATCAGGAACACTTA
TTCTGAGTAACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTT
GTCACGACAACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGG
TACTGTAGAGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGAT
ACCGCGGGGCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTG
ACCTCTATTTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAA
AGAGTCGACGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012463-T2.utr5p1 | KJC3_012463-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012463-T2.utr3p1 | KJC3_012463-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3641993..3643990 + |
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