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KJC3_012471-T2, KJC3_012471-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012471-T2
Unique NameKJC3_012471-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3672416..3674052-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012471-T2 ID=KJC3_012471-T2|Name=KJC3_012471-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1637bp|location=Sequence derived from alignment at ch8:3672416..3674052- (Aspergillus niger KJC3)
CTTTCCGGTCCTGAAGTATCGCGTGTGGTGCCAGTGTTTCCCCATCTATA
ATGACTTCGAACTCCACATCCCTCCCATCCGCGCCGCGCGTCAACCTGGG
CGACAACATCATCCTTCAGCCCCCTCTGTCACGGTGCGGACAGGGACCAG
GCCTGGTACTGATAAGACCAGCCAATGTTACAGAATGCCAAAGCAAGAAC
ACCAGTCTAGACCCAGAGCCACTTCAAAAGTGGGCCGAGGAAAGCTATGC
AGTTGCCCAGATCACTTTCGACATAGATTCTAGCGCAAACGCTTCTCTAC
TGTCGGTCAGAGTTGACAGCGCGATCGCTGGCTTAATCGCCCTGCCTGAG
TGCAATAACAAGCAGAAATTTGGCATATTAGGTCTATACTCATTCCATCC
ATAGCTTCCTTCAAGCAGACTAATCCGAATGCCTAGTCTACGGCTCTCAA
TCCGATTACGCCCCAACATTCATCCACTCACTGCTGGACTACATCAGCGG
CACCAATCAATTTGCAGCAACAGTATACCACAGCATCTGGGATGCTGCCT
CCAACATTCCATCCCTCACACACATCCCGGGATCCCAAGCACCCACTACC
AATGGTACTAACTACGTCTACCCCGACGTATCCTCTCCAGGCTTCATCAT
CCCTGGCCACCTGGATTTCAAATACTCCACCGCCAGCGTAGCACATACCC
GTTCCCTCACCTTCCTCAAAACCCATCTGAACGGGCCATACTTCGACCTG
GAGAAGATCTGGGCCGAGCACACGTACTACGAATTCGATGTTCGGTCAGT
CGAGAAGACCATGGCCACGATGGTTCAAGAACCATACGTGAACCATATCC
CGACAGTAAGCCACTTACTTGCCCCGTCAGTTATCCTCATACCAATGACA
AGCATAGATGACCGGCGGCATCGGCCGCGCCAAACTAAGCAACTTCTACC
TCCATCATTTTATCTTCAATAACCCCGACGACACCGCCCTAGAGCTGATA
AGTCGTACTGTGGGTATTGATCGCGTCGTGGACGAGTTTATTTTCTCCTT
TACACATGACAAGGAGGTAGATTGGTTGTATGTTCACCTCTCAATATGCT
CCTACATATTGAACAAAGCACATAAGTAGTAGTAGCTGACAAGGTTGTGA
CAGAATCCCCGGTATCCCCCCAACCCACAAACCGCTCCGCATCCCCTTCA
CTTCCGTCGTCAACATCCGCGGCGACCGGCTCTTCCACGAGCACATCGCA
TGGGACCAAGCGACAGTTCTCGTGCAGTTGGGCCTCCTACCTCAGTGGTT
GCCTTTTCCGTACCAGCTACCGGGCGGGAAGACACCCGCACCAGGGAAGA
GATTTGAGTATAAGGTTCCTGCTGGGGGCGTAGAGACCGCGGAGAAATTG
AAGGACGAGAGTGCGGTGGAGTCGAATGGCATGTTCGGGGTGGGGATAAG
GGAGGTGGATGATTTGTAGATGAATGAGATGGGTTGGATTTTGGGTATGA
TTGGTAATTGTGAACATAGTATAGTGGTATTGAATGGATTTGCTCATATG
TCAAATGGCTTGTAATTATTTGTGGCGCTGCTGACGGATTTAAGATGCGG
AAGGAACCTACTCGGTGTGTGACATTCCGGATTCGGG
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Coding sequence (CDS) from alignment at ch8:3672416..3674052-

>KJC3_012471-T2 ID=KJC3_012471-T2|Name=KJC3_012471-T2|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch8:3672416..3674052- (Aspergillus niger KJC3)
ATGACCGGCGGCATCGGCCGCGCCAAACTAAGCAACTTCTACCTCCATCA
TTTTATCTTCAATAACCCCGACGACACCGCCCTAGAGCTGATAAGTCGTA
CTGTGGGTATTGATCGCGTCGTGGACGAGTTTATTTTCTCCTTTACACAT
GACAAGGAGGTAGATTGGTTGTATGTTCACCTCTCAATATGCTCCTACAT
ATTGAACAAAGCACATAAGTAGTCTACGGCTCTCAATCCGATTACGCCCC
AACATTCATCCACTCACTGCTGGACTACATCAGCGGCACCAATCAATTTG
CAGCAACAGTATACCACAGCATCTGGGATGCTGCCTCCAACATTCCATCC
CTCACACACATCCCGGGATCCCAAGCACCCACTACCAATGGTACTAACTA
CGTCTACCCCGACGTATCCTCTCCAGGCTTCATCATCCCTGGCCACCTGG
ATTTCAAATACTCCACCGCCAGCGTAGCACATACCCGTTCCCTCACCTTC
CTCAAAACCCATCTGAACGGGCCATACTTCGACCTGGAGAAGATCTGGGC
CGAGCACACGTACTACGAATTCGATGTTCGGTCAGTCGAGAAGACCATGG
CCACGATGGTTCAAGAACCATACGTGAACCATATCCCGACAATGACTTCG
AACTCCACATCCCTCCCATCCGCGCCGCGCGTCAACCTGGGCGACAACAT
CATCCTTCAGCCCCCTCTGTCACGGTGCGGACAGGGACCAGGCCTGGTAC
TGATAAGACCAGCCAATGTTACAGAATGCCAAAGCAAGAACACCAGTCTA
GACCCAGAGCCACTTCAAAAGTGGGCCGAGGAAAGCTATGCAGTTGCCCA
GATCACTTTCGACATAGATTCTAGCGCAAACGCTTCTCTACTGTCGGTCA
GAGTTGACAGCGCGATCGCTGGCTTAATCGCCCTGCCTGAGTGCAATAAC
AAGCAGAAATTTGGCATATTAGATGACCGGCGGCATCGGCCGCGCCAAAC
TAAGCAACTTCTACCTCCATCATTTTATCTTCAATAACCCCGACGACACC
GCCCTAGAGCTGATAAGTCGTACTGTGGGTATTGATCGCGTCGTGGACGA
GTTTATTTTCTCCTTTACACATGACAAGGAGGTAGATTGGTTGTATGTTC
ACCTCTCAATATGCTCCTACATATTGAACAAAGCACATAAGTAGTCTACG
GCTCTCAATCCGATTACGCCCCAACATTCATCCACTCACTGCTGGACTAC
ATCAGCGGCACCAATCAATTTGCAGCAACAGTATACCACAGCATCTGGGA
TGCTGCCTCCAACATTCCATCCCTCACACACATCCCGGGATCCCAAGCAC
CCACTACCAATGGTACTAACTACGTCTACCCCGACGTATCCTCTCCAGGC
TTCATCATCCCTGGCCACCTGGATTTCAAATACTCCACCGCCAGCGTAGC
ACATACCCGTTCCCTCACCTTCCTCAAAACCCATCTGAACGGGCCATACT
TCGACCTGGAGAAGATCTGGGCCGAGCACACGTACTACGAATTCGATGTT
CGGTCAGTCGAGAAGACCATGGCCACGATGGTTCAAGAACCATACGTGAA
CCATATCCCGACAATGACTTCGAACTCCACATCCCTCCCATCCGCGCCGC
GCGTCAACCTGGGCGACAACATCATCCTTCAGCCCCCTCTGTCACGGTGC
GGACAGGGACCAGGCCTGGTACTGATAAGACCAGCCAATGTTACAGAATG
CCAAAGCAAGAACACCAGTCTAGACCCAGAGCCACTTCAAAAGTGGGCCG
AGGAAAGCTATGCAGTTGCCCAGATCACTTTCGACATAGATTCTAGCGCA
AACGCTTCTCTACTGTCGGTCAGAGTTGACAGCGCGATCGCTGGCTTAAT
CGCCCTGCCTGAGTGCAATAACAAGCAGAAATTTGGCATATTAGATGACC
GGCGGCATCGGCCGCGCCAAACTAAGCAACTTCTACCTCCATCATTTTAT
CTTCAATAACCCCGACGACACCGCCCTAGAGCTGATAAGTCGTACTGTGG
GTATTGATCGCGTCGTGGACGAGTTTATTTTCTCCTTTACACATGACAAG
GAGGTAGATTGGTTGTATGTTCACCTCTCAATATGCTCCTACATATTGAA
CAAAGCACATAAGTAGTCTACGGCTCTCAATCCGATTACGCCCCAACATT
CATCCACTCACTGCTGGACTACATCAGCGGCACCAATCAATTTGCAGCAA
CAGTATACCACAGCATCTGGGATGCTGCCTCCAACATTCCATCCCTCACA
CACATCCCGGGATCCCAAGCACCCACTACCAATGGTACTAACTACGTCTA
CCCCGACGTATCCTCTCCAGGCTTCATCATCCCTGGCCACCTGGATTTCA
AATACTCCACCGCCAGCGTAGCACATACCCGTTCCCTCACCTTCCTCAAA
ACCCATCTGAACGGGCCATACTTCGACCTGGAGAAGATCTGGGCCGAGCA
CACGTACTACGAATTCGATGTTCGGTCAGTCGAGAAGACCATGGCCACGA
TGGTTCAAGAACCATACGTGAACCATATCCCGACAATGACTTCGAACTCC
ACATCCCTCCCATCCGCGCCGCGCGTCAACCTGGGCGACAACATCATCCT
TCAGCCCCCTCTGTCACGGTGCGGACAGGGACCAGGCCTGGTACTGATAA
GACCAGCCAATGTTACAGAATGCCAAAGCAAGAACACCAGTCTAGACCCA
GAGCCACTTCAAAAGTGGGCCGAGGAAAGCTATGCAGTTGCCCAGATCAC
TTTCGACATAGATTCTAGCGCAAACGCTTCTCTACTGTCGGTCAGAGTTG
ACAGCGCGATCGCTGGCTTAATCGCCCTGCCTGAGTGCAATAACAAGCAG
AAATTTGGCATATTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012471KJC3_012471Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012471-T2KJC3_012471-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012471-T2.cdsKJC3_012471-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012471-T2.utr3p1KJC3_012471-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012471-T2.exon3KJC3_012471-T2.exon3Aspergillus niger KJC3exon
KJC3_012471-T2.exon2KJC3_012471-T2.exon2Aspergillus niger KJC3exon
KJC3_012471-T2.exon1KJC3_012471-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012471-T2.utr5p1KJC3_012471-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3672416..3674052 -
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