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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3683423..3685723+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012476-T1 ID=KJC3_012476-T1|Name=KJC3_012476-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2301bp|location=Sequence derived from alignment at ch8:3683423..3685723+ (Aspergillus niger KJC3)
ATCGACATATCTAGTTCCGGGTAGTTGAGCGAGGGAGCTTTCGTCGTCGC
CGAGCTTGGCACACCGGGATCGGCTCCGGGAATCGTTCGGAGAAACGTCG
GCACGGCTATCCGTCGCCGGTACTTCTGGCCGGCTGTAGCCGCAACGTCC
ATCCATGGCTTGCTGTTATTCTAGAGAGGGAAGCTATTGCGGTCTCATCT
CAGTACTTTTCCTAATCGGATTTCATGCATGCATCTGCTTGCAGTCAAAT
GTCGGTTAATCGAAATTTGGGGAAGACGCCTCCGCAAAAACGAGCGTAAT
CAGTGGTGTCTGTGTGTAACCCAACTACACCGTGGCTAACATATGCAAGT
TCATCAGCATGACTGATTACTAAGAGCACCACTCTTCACCGTTTAATTAT
TACTCACATCCATCAGTGCTCCCTTTAGATCGAGCCATAGCAGCTACTCT
CTCCTCAGTTTCCTCCCATCACTATGGGAGATGAGACCCTGGAGGACGCC
GCCCCGAGCGCCGCAGAGCGGCAAGCTGTATACGAAACAGGCTTTCGTAT
CTGGAAGAGCCTTTATCTTCACGCGACACAAGAATCTAGCTTTCCAAGGA
CATGCTTTGATATCCAGCCAATTCTTACAAAGCAGCCTCAATTTCCAAAT
GACTTGGATCTGAAAGCTTCTTACAACCATCTCTTTGTTCAAGGTACATC
AACATGGAAGGGATCAGAGGATTGCAATATGCCTTCCCAGGAACGGCACC
TGCAGATTCCTGTTTCGATTAAATGTCCTATTCCTCTTAGCTTATCAGCC
GATATAGATGAAAGCTATCTGGAATGGTTCACTTTGGAGGAAAGTCATAT
CGCAGTGTTAATGTGTGCGTGGAGCTATACCCTTTCGGCTCGCTGGGCTG
AACTCATGCCCGAGGCTATACTCGCATATACGGAAGGCACAGCATACAAT
AGCGACGGATCCGGAGATCAAAATTCTGTTACGGTAGATATAGGGGGCGT
TGACGATGATGCAGTGAGGTGGTGGACTGCTATTTTAGCAATAGGAGGGT
GGGAGGCCTACATTGTGGCTGGGGAAAACAGATATCGATCCCCTTGGTCA
ACTAATCTTCCAGCGGAACCGATTTTTAGCATCGCCAATCACAGCAGAAA
AGGTCCCTACTTCGGAACACCTATCTCAGATACAACTGCCCTGGGCTTAC
TATGTGATTATTGCGCGCTACATGGCATTGTGGATCAGGGCTATGCAGCA
TTGTCAGCCGTCCTACTTCTTCCAATGGTACATGACAACAGAAAGACTGT
CCAAATTCCGCGACCAATACAAAGGCACAAACCCAACCACAAACTCAACC
GTAAGGCCAAGTCATCAAAGCTCACTTCCCACCTTGACCTTGCCTGCATC
CAGGAAGTCAATAATCTTGATAAACTCCTCACCATGAGCTGCAATACGAA
AGGGATGCGCTCGCTGCTATCGAGCATATTCTACGAGTCAGGGATAGCTT
GCAATGTTGTAAGCCCATGGCTGCAATCTATAACTGCTGTTGTAATTTCC
GTCGCAGACAAACGCATTCTCACCCATATGCTAATGAGACGAGTCCCTCA
CCTTGCATTTTTATGGCTAGGTGGAGCAGTTTTGAACATTCAGGAGCACA
TCTTATATGAGGGAAAATTCGGACTAATTCCTACCGAGCTACATGCTGCA
GTGTGGTCTGGAACCACGCAATCATTCATGCAGGAGCCTATTCATCCTGC
AACAAATGGTCATATTCGGCGCTCTGACGAATGCCGACTTCTTTATTTCA
TTCAGGAGGAACATCACACCCGATGGCCTATATGTCAGTGGACGCCGTTC
GGCGTCACGGCCCTGCAAGACACTGAGATCGATGTCCGTCTGCATGCAGA
CTGTGCTGGGCATTGCCTTCAGTATGCGGGGTGGAAGTGGACTTGCCAGA
ATGGTAGGGTGGCATATCAAATGTCCGACAACACTCCTCCTCCAAACCTC
CCCCCCGAAGAGCCAGTGGTGACAAATGTCACAATCGACTACCAAGGTCT
TAATCATGGTGACGAGGGTGTATCAGAAAATGCAACTCGGAGCATCTTCG
GCTGGCTCCGAGTTGAGGGATTCCCTCCCAATGAAAAGAAGATCCACGAT
TGGATCTACATCGATGAGTCCGATTATGAGCACCCATGATTCTTAACTTG
GATTTCAGTCGCGGTCTCCCGCGAGCGTTCATCATTCCCGGGAATGAGGG
GCCAAAAGGCCGCCTACCACAGATGCTTGCGGGAGATTAAAGTTTACAGG
T back to topCoding sequence (CDS) from alignment at ch8:3683423..3685723+ >KJC3_012476-T1 ID=KJC3_012476-T1|Name=KJC3_012476-T1|organism=Aspergillus niger KJC3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch8:3683423..3685723+ (Aspergillus niger KJC3)
ATGGGAGATGAGACCCTGGAGGACGCCGCCCCGAGCGCCGCAGAGCGGCA
AGCTGTATACGAAACAGGCTTTCGTATCTGGAAGAGCCTTTATCTTCACG
CGACACAAGAATCTAGCTTTCCAAGGACATGCTTTGATATCCAGCCAATT
CTTACAAAGCAGCCTCAATTTCCAAATGACTTGGATCTGAAAGCTTCTTA
CAACCATCTCTTTGTTCAAGGTACATCAACATGGAAGGGATCAGAGGATT
GCAATATGCCTTCCCAGGAACGGCACCTGCAGATTCCTGTTTCGATTAAA
TGTCCTATTCCTCTTAGCTTATCAGCCGATATAGATGAAAGCTATCTGGA
ATGGTTCACTTTGGAGGAAAGTCATATCGCAGTGTTAATGTGTGCGTGGA
GCTATACCCTTTCGGCTCGCTGGGCTGAACTCATGCCCGAGGCTATACTC
GCATATACGGAAGGCACAGCATACAATAGCGACGGATCCGGAGATCAAAA
TTCTGTTACGGTAGATATAGGGGGCGTTGACGATGATGCAGTGAGGTGGT
GGACTGCTATTTTAGCAATAGGAGGGTGGGAGGCCTACATTGTGGCTGGG
GAAAACAGATATCGATCCCCTTGGTCAACTAATCTTCCAGCGGAACCGAT
TTTTAGCATCGCCAATCACAGCAGAAAAGGTCCCTACTTCGGAACACCTA
TCTCAGATACAACTGCCCTGGGCTTACTATGTGATTATTGCGCGCTACAT
GGCATTGTGGATCAGGGCTATGCAGCATTGTCAGCCGTCCTACTTCTTCC
AATGGTACATGACAACAGAAAGACTGTCCAAATTCCGCGACCAATACAAA
GGCACAAACCCAACCACAAACTCAACCGTAAGGCCAAGTCATCAAAGCTC
ACTTCCCACCTTGACCTTGCCTGCATCCAGGAAGTCAATAATCTTGATAA
ACTCCTCACCATGAGCTGCAATACGAAAGGGATGCGCTCGCTGCTATCGA
GCATATTCTACGAGTCAGGGATAGCTTGCAATGTTGTAAGCCCATGGCTG
CAATCTATAACTGCTGTTGTAATTTCCGTCGCAGACAAACGCATTCTCAC
CCATATGCTAATGAGACGAGTCCCTCACCTTGCATTTTTATGGCTAGGTG
GAGCAGTTTTGAACATTCAGGAGCACATCTTATATGAGGGAAAATTCGGA
CTAATTCCTACCGAGCTACATGCTGCAGTGTGGTCTGGAACCACGCAATC
ATTCATGCAGGAGCCTATTCATCCTGCAACAAATGGTCATATTCGGCGCT
CTGACGAATGCCGACTTCTTTATTTCATTCAGGAGGAACATCACACCCGA
TGGCCTATATGTCAGTGGACGCCGTTCGGCGTCACGGCCCTGCAAGACAC
TGAGATCGATGTCCGTCTGCATGCAGACTGTGCTGGGCATTGCCTTCAGT
ATGCGGGGTGGAAGTGGACTTGCCAGAATGGTAGGGTGGCATATCAAATG
TCCGACAACACTCCTCCTCCAAACCTCCCCCCCGAAGAGCCAGTGGTGAC
AAATGTCACAATCGACTACCAAGGTCTTAATCATGGTGACGAGGGTGTAT
CAGAAAATGCAACTCGGAGCATCTTCGGCTGGCTCCGAGTTGAGGGATTC
CCTCCCAATGAAAAGAAGATCCACGATTGGATCTACATCGATGAGTCCGA
TTATGAGCACCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012476-T1.utr5p1 | KJC3_012476-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012476-T1.utr3p1 | KJC3_012476-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3683423..3685723 + |
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