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KJC3_012490-T1, KJC3_012490-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012490-T1
Unique NameKJC3_012490-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3720412..3722229+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012490-T1 ID=KJC3_012490-T1|Name=KJC3_012490-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1818bp|location=Sequence derived from alignment at ch8:3720412..3722229+ (Aspergillus niger KJC3)
TGCCTCAGGTGTCAATAGGTGTCCGGTGACTATGAGATGGACTGAGACTT
TTGCAGTTCCCCAACTCTCCATGCACCCATCACAATCACTTTCTATCTGC
GACAGAAGATAATGCAAGGGCTATATCATCCAGATAAAGCTAATGCAAAT
ACCTCCTCGATGCGATGATCAACTTTAGGCACCATCATATCCTCACCCGA
AGTCCCAATGAGCATGGGCCGCTGGTTGCTTCACCCAAGGATGACGGCGC
TAAGCTCTGACTACGTGGCTGTCACCCCACCTATGAACTGTGGCTGCTTG
AAGTTAAATCCCAGCCCGACATGTTCCCCCACGATGATAAAACGAGCAGC
GTCGAATGGGGCCAGGAAAATACGGTGAGTGCGCACTAGCCTTCCGCTCC
AATGTGCCCAAAGAAGCGAGGCGTTGATATGATTTGCTGCTGCTTAGAAT
CCGCATTGACAATGTCGATCAATACGTCGGGCCGGAATTAATTCAAGAAC
AGTCATCACTGGCTGCACTGATACCAGCCCCGATAATGCTTTGAGCCCGA
TCAGCCGTTGACGGGTGTGCGTCATTGCCTCTGAGGCGGAGATTCCCATA
AGCAGTGTTCGGTGTCAGCGTCGATGGCATATAAATAGTATCGGAGTCCG
TGGCTCATGGTGGCTGAACCATGTTGGCTTCTGAGCTCATCTAGAAGTTC
AGCATTACCGTTTGCACCATGGTGAGAAACATTAGTATCCTCAGCCTCGA
TGGCGGGGGTGTCCGCGGATTATCCTCCCTTTACATTCTGAAGCACATTA
TGGAATCTATCGATCCTGAAAACACACCAAAGCCATGCGAATACTTTGAT
TTGATAGGAGGATCAGGATCAGGCGGGTAGGCATTCTGACGGCGCACAAA
TCGTTCCGACCGGGTTTATTTTCTAACTGCTTGAAAATAAAAGATTAATA
GCCATTATGCTTGGCCGCTTGGAGATGGACATTGATCAGTGCATCAACGC
ATACAAAAGGCTGTCAAACCACGTATTTGCTCGAAAGCGACTTCTGCCAG
TAGGAGGCAACTTGCGCCGACAATCGAAGTATGACGGTCGCAGGATTGAA
ACTGCCATGAAGGCGATTCTTCATGAGCTTGGCTACGAAGATGACATACT
TCTAAGAGAACCGGCATCTTCCTGCAAAGTGTGAGTCTCTCGCAATGATT
TAGAAACTGCGTTCTAATCGACATAGCTACGTTTGCGTGACCGATGACGG
TTCAAAACGTAACCTAGCACCCTTGACAAGCTACCCGAGCAAATACTGCT
CCAACGAGCTTTACAAGACCGCCAAAGTATGGCAGGCTGGTAGAGCCTGC
TTCTCCACAGAGCAGCTCTTCGATCCCGTTCCTATTGGACCAAGCGGACG
GCGATTTTACAATAGCAGCACAGACGCTAACAATCCCGTGCGAGAAGTCT
GGATAGAAGCGAGAGGGATATGGCCATCCGGCTCATTGGATAACCAGATA
CGCTGCATGGTATCAATTGGCACGGGTGTGCCGTCGATCAAACGATCCGG
CAAAGCGATGTTCGGCTTACTGAAGACCTCGCGCACTGATTCCATTGATA
CCGAGATGGACATGAACAAGTTCCTCCGAGAGCATACCGAACTAGACGAC
GAGAATCGTCTATTCCGATTCGATGTCCCCAATGGCTTAGCGGATATTTC
ACTCGATGGGATTGATGAGATCGACACGATCGTGGATGCTACCGAGGAAT
ATCTCGCCAAGGAGCCGGTCTACAAGCAGATTCAGAAATGTGGGAGAGCT
CTCAGTGCAGGGCCGTAG
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Coding sequence (CDS) from alignment at ch8:3720412..3722229+

>KJC3_012490-T1 ID=KJC3_012490-T1|Name=KJC3_012490-T1|organism=Aspergillus niger KJC3|type=CDS|length=1632bp|location=Sequence derived from alignment at ch8:3720412..3722229+ (Aspergillus niger KJC3)
ATGCTTGGCCGCTTGGAGATGGACATTGATCAGTGCATCAACGCATACAA
AAGGCTGTCAAACCACGTATTTGCTCGAAAGCGACTTCTGCCAGTAGGAG
GCAACTTGCGCCGACAATCGAAGTATGACGGTCGCAGGATTGAAACTGCC
ATGAAGGCGATTCTTCATGAGCTTGGCTACGAAGATGACATACTTCTAAG
AGAACCGGCATCTTCCTGCAAAGTCTACGTTTGCGTGACCGATGACGGTT
CAAAACGTAACCTAGCACCCTTGACAAGCTACCCGAGCAAATACTGCTCC
AACGAGCTTTACAAGACCGCCAAAGTATGGCAGGCTGGTAGAGCCTGCTT
CTCCACAGAGCAGCTCTTCGATCCCGTTCCTATTGGACCAAGCGGACGGC
GATTTTACAATAGCAGCACAGACGCTAACAATCCCGTGCGAGAAGTCTGG
ATAGAAGCGAGAGGGATATGGCCATCCGGCTCATTGGATAACCAGATACG
CTGCATGGTATCAATTGGCACGGGTGTGCCGTCGATCAAACGATCCGGCA
AAGCGATGTTCGGCTTACTGAAGACCTCGCGCACTGATTCCATTGATACC
GAGATGGACATGAACAAGTTCCTCCGAGAGCATACCGAACTAGACGACGA
GAATCGTCTATTCCGATTCGATGTCCCCAATGGCTTAGCGGATATTTCAC
TCGATGGGATTGATGAGATCGACACGATCGTGGATGCTACCGAGGAATAT
CTCGCCAAGGAGCCGGTCTACAAGCAGATTCAGAAATGTGGGAGAGCTCT
CAGTGCAGGGCCGTAGATGCTTGGCCGCTTGGAGATGGACATTGATCAGT
GCATCAACGCATACAAAAGGCTGTCAAACCACGTATTTGCTCGAAAGCGA
CTTCTGCCAGTAGGAGGCAACTTGCGCCGACAATCGAAGTATGACGGTCG
CAGGATTGAAACTGCCATGAAGGCGATTCTTCATGAGCTTGGCTACGAAG
ATGACATACTTCTAAGAGAACCGGCATCTTCCTGCAAAGTCTACGTTTGC
GTGACCGATGACGGTTCAAAACGTAACCTAGCACCCTTGACAAGCTACCC
GAGCAAATACTGCTCCAACGAGCTTTACAAGACCGCCAAAGTATGGCAGG
CTGGTAGAGCCTGCTTCTCCACAGAGCAGCTCTTCGATCCCGTTCCTATT
GGACCAAGCGGACGGCGATTTTACAATAGCAGCACAGACGCTAACAATCC
CGTGCGAGAAGTCTGGATAGAAGCGAGAGGGATATGGCCATCCGGCTCAT
TGGATAACCAGATACGCTGCATGGTATCAATTGGCACGGGTGTGCCGTCG
ATCAAACGATCCGGCAAAGCGATGTTCGGCTTACTGAAGACCTCGCGCAC
TGATTCCATTGATACCGAGATGGACATGAACAAGTTCCTCCGAGAGCATA
CCGAACTAGACGACGAGAATCGTCTATTCCGATTCGATGTCCCCAATGGC
TTAGCGGATATTTCACTCGATGGGATTGATGAGATCGACACGATCGTGGA
TGCTACCGAGGAATATCTCGCCAAGGAGCCGGTCTACAAGCAGATTCAGA
AATGTGGGAGAGCTCTCAGTGCAGGGCCGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012490KJC3_012490Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012490-T1KJC3_012490-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012490-T1.utr5p1KJC3_012490-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012490-T1.utr5p2KJC3_012490-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012490-T1.exon1KJC3_012490-T1.exon1Aspergillus niger KJC3exon
KJC3_012490-T1.exon2KJC3_012490-T1.exon2Aspergillus niger KJC3exon
KJC3_012490-T1.exon3KJC3_012490-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012490-T1.cdsKJC3_012490-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR016035
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3720412..3722229 +
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