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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3727466..3729630- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012493-T1 ID=KJC3_012493-T1|Name=KJC3_012493-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2165bp|location=Sequence derived from alignment at ch8:3727466..3729630- (Aspergillus niger KJC3)
TACCTACCATTCTCCCCACTGCGTGACGACTTAAGCTTATAGTGTCCGGT
ACTCGGCCAGACTACGGCTGTCGGTCTTTTAGCGCAGAATTAACTGAACA
GGACAGAGTGCGCCACTCCCCTCCAGACGCCTATGGAGCGATATGGCAAC
ATTGCCCCAGAATGTCGCGATATATCTCGAGAAAGACTATAAAGAAAGTC
AAGGGCGCGAGATGGCTTGGATTATGCAAATCTGGCAAGGATTCATTCTT
CTGTAGCTCGTCTGAGCCGAAGGCTTCCTTGACTTTGCCGAGATATACTC
GAATTCCGCTTAGTTCGCCGCGCTTCGAACGGAAACAATGACAAGCTTAA
AGAGCTTACAGAATATGCGTCATGCTTTCACTTGGAATATGCTGATAGCA
TACGCTCTCATTGCCACTAGTGTCTTTAGCTATGGCTTTGACGACGCTGT
TTACTCGACTATCCAGACCATGGATTGTAAGGAATAGAGATCCCCTGTCT
ATGCATCCAAGTTCATTGTTGACTTTCTTCAAGCTTTCGAGAAACAGTTC
GGCACCTACGATAACTCTACTGGGGAATACGGGTTCAGTACCCAGCATTT
GGCCTTCCTTAATTCCCTCGGTCTGCCTGCGAAAGCGGCTGGCACATTTA
TCGGATGGGCAATTGGAGAGTACTACGGACGTCGAGCCTGCTTCATCGGC
ATGCAGCTGATGTGCATCGTTGGTATCTCAGTCAGCTACAGCGCGACGAC
TTTCGGTCAGATCCTGGCCGGACGGATGATAGTGCAGTGTTTCATTGGCT
GGGAGGACTGGCTTGTGCCCATGTTCCTCGCTGAGATCAGTCCTAGTGTG
GTACGTGGGGCGACGGTGGTGATATACGTCTTTGCCCACATGTTTGGCTC
ATTTATTTGTGCTATCATCACGTATGAAACGGCCAAGTTAGAGGGAAACG
TTGCTTGGAAAATCCCGATCGGTGTGATGTGGGCGTTTCCCTGCTTCAAT
CTGCTCTGTAGTTGGCTGGTGCCAGAAAGCCCTCGGTGGCTTGTCCGAAA
GAACAAAATCCAGGCGGCGACGAAACAGCTCGAATATCTGAACAAGGGGA
AGGACATAGATGTTGCTGATGAAGTGGCTTTCTTGCAGGCGTCTGTAGAG
GCAAACGCACAGACGAAAGGTTCCTGGGCTGAACTACTCCAGGGGACCAA
TCGAGTAAGTCAATTCTTCTCGTACATGCCCCAAATTACGAGTGAGTGGT
ACTGACATCTCTAAGAGAAGGACAATGATTGCAGTCATGACCGCGGCTTT
CAACCAACTGACCGGACAAGCCTTCGTCAGTCAGTATGGCAGTCTGTTCG
TCAAATCCCTAAATGTCATGAACCCGTTCGCCTTCACGCTATTATCCCGG
GGCATCTCGACCATGGGTCCTCTAGTTACCTTCTCCTTAGTTGACACCAC
TGGAAGACGACCCATATACCTGATTGGCGGTACCATGACCACCGCCCTGC
TCATGACTTGTGGTGGACTAGGGACAGGCACCATAACCGATGGCAAAAAG
CGTGGAGTTTGCGGGGTGCTCATGATGTACGGGCTGTTCTACATCATGTC
ATTCGGGTCTATGTATGCCCCCTTACCGCGGCGAGCATCAGTCTTCCTGG
ATGAAGCATGTGCTGACTATTGACCCATACCCACAGTTCCGTGATTACAG
GCGCAGAAACACCCCACCTCCGACTCCGCGATAAGACCTCGGTTGTTGCC
TGGCTTATCCGCATTGTATGCGACTTTGCAGTCTCCTACTCTCTTCCGTA
CCTACTCAAGGCCCCGTATGCCGATCTTCAGTCCAAGGTTGGCTTTATCT
ATGGATCCCTTGCAGCCCTGGGAGTGGTTTGCGGATACTTCTTCCTTCCC
GAACTCACAGGACGCTCCCTGGAGGAGCTGGAAGAGATGTGGCAGCGGCG
CATCCCTGCGCGAAAGTTCGCTGGTATGTATCACGATTGGCTCTAAGATT
ACTTGCCCCAAATTGATGTATGTTCCGAGCGAGCTAACGGATGAGTACAG
ACTGGGACTCAGACCGCACCGGAAGTATTGAAGCAAAAGAGGGCGGAACA
GAGGAGGATGCTGAGAAGGCCAAAGGAGGACTGTCTCAGGTATATGTACA
AAAGCTGTAAACGAG back to topCoding sequence (CDS) from alignment at ch8:3727466..3729630- >KJC3_012493-T1 ID=KJC3_012493-T1|Name=KJC3_012493-T1|organism=Aspergillus niger KJC3|type=CDS|length=7770bp|location=Sequence derived from alignment at ch8:3727466..3729630- (Aspergillus niger KJC3)
ACTGGGACTCAGACCGCACCGGAAGTATTGAAGCAAAAGAGGGCGGAACA
GAGGAGGATGCTGAGAAGGCCAAAGGAGGACTGTCTCAGGTATATGTACA
AAAGCTGTAATTCCGTGATTACAGGCGCAGAAACACCCCACCTCCGACTC
CGCGATAAGACCTCGGTTGTTGCCTGGCTTATCCGCATTGTATGCGACTT
TGCAGTCTCCTACTCTCTTCCGTACCTACTCAAGGCCCCGTATGCCGATC
TTCAGTCCAAGGTTGGCTTTATCTATGGATCCCTTGCAGCCCTGGGAGTG
GTTTGCGGATACTTCTTCCTTCCCGAACTCACAGGACGCTCCCTGGAGGA
GCTGGAAGAGATGTGGCAGCGGCGCATCCCTGCGCGAAAGTTCGCTGAGA
AGGACAATGATTGCAGTCATGACCGCGGCTTTCAACCAACTGACCGGACA
AGCCTTCGTCAGTCAGTATGGCAGTCTGTTCGTCAAATCCCTAAATGTCA
TGAACCCGTTCGCCTTCACGCTATTATCCCGGGGCATCTCGACCATGGGT
CCTCTAGTTACCTTCTCCTTAGTTGACACCACTGGAAGACGACCCATATA
CCTGATTGGCGGTACCATGACCACCGCCCTGCTCATGACTTGTGGTGGAC
TAGGGACAGGCACCATAACCGATGGCAAAAAGCGTGGAGTTTGCGGGGTG
CTCATGATGTACGGGCTGTTCTACATCATGTCATTCGGGTCTATCTTTCG
AGAAACAGTTCGGCACCTACGATAACTCTACTGGGGAATACGGGTTCAGT
ACCCAGCATTTGGCCTTCCTTAATTCCCTCGGTCTGCCTGCGAAAGCGGC
TGGCACATTTATCGGATGGGCAATTGGAGAGTACTACGGACGTCGAGCCT
GCTTCATCGGCATGCAGCTGATGTGCATCGTTGGTATCTCAGTCAGCTAC
AGCGCGACGACTTTCGGTCAGATCCTGGCCGGACGGATGATAGTGCAGTG
TTTCATTGGCTGGGAGGACTGGCTTGTGCCCATGTTCCTCGCTGAGATCA
GTCCTAGTGTGGTACGTGGGGCGACGGTGGTGATATACGTCTTTGCCCAC
ATGTTTGGCTCATTTATTTGTGCTATCATCACGTATGAAACGGCCAAGTT
AGAGGGAAACGTTGCTTGGAAAATCCCGATCGGTGTGATGTGGGCGTTTC
CCTGCTTCAATCTGCTCTGTAGTTGGCTGGTGCCAGAAAGCCCTCGGTGG
CTTGTCCGAAAGAACAAAATCCAGGCGGCGACGAAACAGCTCGAATATCT
GAACAAGGGGAAGGACATAGATGTTGCTGATGAAGTGGCTTTCTTGCAGG
CGTCTGTAGAGGCAAACGCACAGACGAAAGGTTCCTGGGCTGAACTACTC
CAGGGGACCAATCGAATGACAAGCTTAAAGAGCTTACAGAATATGCGTCA
TGCTTTCACTTGGAATATGCTGATAGCATACGCTCTCATTGCCACTAGTG
TCTTTAGCTATGGCTTTGACGACGCTGTTTACTCGACTATCCAGACCATG
GATTACTGGGACTCAGACCGCACCGGAAGTATTGAAGCAAAAGAGGGCGG
AACAGAGGAGGATGCTGAGAAGGCCAAAGGAGGACTGTCTCAGGTATATG
TACAAAAGCTGTAATTCCGTGATTACAGGCGCAGAAACACCCCACCTCCG
ACTCCGCGATAAGACCTCGGTTGTTGCCTGGCTTATCCGCATTGTATGCG
ACTTTGCAGTCTCCTACTCTCTTCCGTACCTACTCAAGGCCCCGTATGCC
GATCTTCAGTCCAAGGTTGGCTTTATCTATGGATCCCTTGCAGCCCTGGG
AGTGGTTTGCGGATACTTCTTCCTTCCCGAACTCACAGGACGCTCCCTGG
AGGAGCTGGAAGAGATGTGGCAGCGGCGCATCCCTGCGCGAAAGTTCGCT
GAGAAGGACAATGATTGCAGTCATGACCGCGGCTTTCAACCAACTGACCG
GACAAGCCTTCGTCAGTCAGTATGGCAGTCTGTTCGTCAAATCCCTAAAT
GTCATGAACCCGTTCGCCTTCACGCTATTATCCCGGGGCATCTCGACCAT
GGGTCCTCTAGTTACCTTCTCCTTAGTTGACACCACTGGAAGACGACCCA
TATACCTGATTGGCGGTACCATGACCACCGCCCTGCTCATGACTTGTGGT
GGACTAGGGACAGGCACCATAACCGATGGCAAAAAGCGTGGAGTTTGCGG
GGTGCTCATGATGTACGGGCTGTTCTACATCATGTCATTCGGGTCTATCT
TTCGAGAAACAGTTCGGCACCTACGATAACTCTACTGGGGAATACGGGTT
CAGTACCCAGCATTTGGCCTTCCTTAATTCCCTCGGTCTGCCTGCGAAAG
CGGCTGGCACATTTATCGGATGGGCAATTGGAGAGTACTACGGACGTCGA
GCCTGCTTCATCGGCATGCAGCTGATGTGCATCGTTGGTATCTCAGTCAG
CTACAGCGCGACGACTTTCGGTCAGATCCTGGCCGGACGGATGATAGTGC
AGTGTTTCATTGGCTGGGAGGACTGGCTTGTGCCCATGTTCCTCGCTGAG
ATCAGTCCTAGTGTGGTACGTGGGGCGACGGTGGTGATATACGTCTTTGC
CCACATGTTTGGCTCATTTATTTGTGCTATCATCACGTATGAAACGGCCA
AGTTAGAGGGAAACGTTGCTTGGAAAATCCCGATCGGTGTGATGTGGGCG
TTTCCCTGCTTCAATCTGCTCTGTAGTTGGCTGGTGCCAGAAAGCCCTCG
GTGGCTTGTCCGAAAGAACAAAATCCAGGCGGCGACGAAACAGCTCGAAT
ATCTGAACAAGGGGAAGGACATAGATGTTGCTGATGAAGTGGCTTTCTTG
CAGGCGTCTGTAGAGGCAAACGCACAGACGAAAGGTTCCTGGGCTGAACT
ACTCCAGGGGACCAATCGAATGACAAGCTTAAAGAGCTTACAGAATATGC
GTCATGCTTTCACTTGGAATATGCTGATAGCATACGCTCTCATTGCCACT
AGTGTCTTTAGCTATGGCTTTGACGACGCTGTTTACTCGACTATCCAGAC
CATGGATTACTGGGACTCAGACCGCACCGGAAGTATTGAAGCAAAAGAGG
GCGGAACAGAGGAGGATGCTGAGAAGGCCAAAGGAGGACTGTCTCAGGTA
TATGTACAAAAGCTGTAATTCCGTGATTACAGGCGCAGAAACACCCCACC
TCCGACTCCGCGATAAGACCTCGGTTGTTGCCTGGCTTATCCGCATTGTA
TGCGACTTTGCAGTCTCCTACTCTCTTCCGTACCTACTCAAGGCCCCGTA
TGCCGATCTTCAGTCCAAGGTTGGCTTTATCTATGGATCCCTTGCAGCCC
TGGGAGTGGTTTGCGGATACTTCTTCCTTCCCGAACTCACAGGACGCTCC
CTGGAGGAGCTGGAAGAGATGTGGCAGCGGCGCATCCCTGCGCGAAAGTT
CGCTGAGAAGGACAATGATTGCAGTCATGACCGCGGCTTTCAACCAACTG
ACCGGACAAGCCTTCGTCAGTCAGTATGGCAGTCTGTTCGTCAAATCCCT
AAATGTCATGAACCCGTTCGCCTTCACGCTATTATCCCGGGGCATCTCGA
CCATGGGTCCTCTAGTTACCTTCTCCTTAGTTGACACCACTGGAAGACGA
CCCATATACCTGATTGGCGGTACCATGACCACCGCCCTGCTCATGACTTG
TGGTGGACTAGGGACAGGCACCATAACCGATGGCAAAAAGCGTGGAGTTT
GCGGGGTGCTCATGATGTACGGGCTGTTCTACATCATGTCATTCGGGTCT
ATCTTTCGAGAAACAGTTCGGCACCTACGATAACTCTACTGGGGAATACG
GGTTCAGTACCCAGCATTTGGCCTTCCTTAATTCCCTCGGTCTGCCTGCG
AAAGCGGCTGGCACATTTATCGGATGGGCAATTGGAGAGTACTACGGACG
TCGAGCCTGCTTCATCGGCATGCAGCTGATGTGCATCGTTGGTATCTCAG
TCAGCTACAGCGCGACGACTTTCGGTCAGATCCTGGCCGGACGGATGATA
GTGCAGTGTTTCATTGGCTGGGAGGACTGGCTTGTGCCCATGTTCCTCGC
TGAGATCAGTCCTAGTGTGGTACGTGGGGCGACGGTGGTGATATACGTCT
TTGCCCACATGTTTGGCTCATTTATTTGTGCTATCATCACGTATGAAACG
GCCAAGTTAGAGGGAAACGTTGCTTGGAAAATCCCGATCGGTGTGATGTG
GGCGTTTCCCTGCTTCAATCTGCTCTGTAGTTGGCTGGTGCCAGAAAGCC
CTCGGTGGCTTGTCCGAAAGAACAAAATCCAGGCGGCGACGAAACAGCTC
GAATATCTGAACAAGGGGAAGGACATAGATGTTGCTGATGAAGTGGCTTT
CTTGCAGGCGTCTGTAGAGGCAAACGCACAGACGAAAGGTTCCTGGGCTG
AACTACTCCAGGGGACCAATCGAATGACAAGCTTAAAGAGCTTACAGAAT
ATGCGTCATGCTTTCACTTGGAATATGCTGATAGCATACGCTCTCATTGC
CACTAGTGTCTTTAGCTATGGCTTTGACGACGCTGTTTACTCGACTATCC
AGACCATGGATTACTGGGACTCAGACCGCACCGGAAGTATTGAAGCAAAA
GAGGGCGGAACAGAGGAGGATGCTGAGAAGGCCAAAGGAGGACTGTCTCA
GGTATATGTACAAAAGCTGTAATTCCGTGATTACAGGCGCAGAAACACCC
CACCTCCGACTCCGCGATAAGACCTCGGTTGTTGCCTGGCTTATCCGCAT
TGTATGCGACTTTGCAGTCTCCTACTCTCTTCCGTACCTACTCAAGGCCC
CGTATGCCGATCTTCAGTCCAAGGTTGGCTTTATCTATGGATCCCTTGCA
GCCCTGGGAGTGGTTTGCGGATACTTCTTCCTTCCCGAACTCACAGGACG
CTCCCTGGAGGAGCTGGAAGAGATGTGGCAGCGGCGCATCCCTGCGCGAA
AGTTCGCTGAGAAGGACAATGATTGCAGTCATGACCGCGGCTTTCAACCA
ACTGACCGGACAAGCCTTCGTCAGTCAGTATGGCAGTCTGTTCGTCAAAT
CCCTAAATGTCATGAACCCGTTCGCCTTCACGCTATTATCCCGGGGCATC
TCGACCATGGGTCCTCTAGTTACCTTCTCCTTAGTTGACACCACTGGAAG
ACGACCCATATACCTGATTGGCGGTACCATGACCACCGCCCTGCTCATGA
CTTGTGGTGGACTAGGGACAGGCACCATAACCGATGGCAAAAAGCGTGGA
GTTTGCGGGGTGCTCATGATGTACGGGCTGTTCTACATCATGTCATTCGG
GTCTATCTTTCGAGAAACAGTTCGGCACCTACGATAACTCTACTGGGGAA
TACGGGTTCAGTACCCAGCATTTGGCCTTCCTTAATTCCCTCGGTCTGCC
TGCGAAAGCGGCTGGCACATTTATCGGATGGGCAATTGGAGAGTACTACG
GACGTCGAGCCTGCTTCATCGGCATGCAGCTGATGTGCATCGTTGGTATC
TCAGTCAGCTACAGCGCGACGACTTTCGGTCAGATCCTGGCCGGACGGAT
GATAGTGCAGTGTTTCATTGGCTGGGAGGACTGGCTTGTGCCCATGTTCC
TCGCTGAGATCAGTCCTAGTGTGGTACGTGGGGCGACGGTGGTGATATAC
GTCTTTGCCCACATGTTTGGCTCATTTATTTGTGCTATCATCACGTATGA
AACGGCCAAGTTAGAGGGAAACGTTGCTTGGAAAATCCCGATCGGTGTGA
TGTGGGCGTTTCCCTGCTTCAATCTGCTCTGTAGTTGGCTGGTGCCAGAA
AGCCCTCGGTGGCTTGTCCGAAAGAACAAAATCCAGGCGGCGACGAAACA
GCTCGAATATCTGAACAAGGGGAAGGACATAGATGTTGCTGATGAAGTGG
CTTTCTTGCAGGCGTCTGTAGAGGCAAACGCACAGACGAAAGGTTCCTGG
GCTGAACTACTCCAGGGGACCAATCGAATGACAAGCTTAAAGAGCTTACA
GAATATGCGTCATGCTTTCACTTGGAATATGCTGATAGCATACGCTCTCA
TTGCCACTAGTGTCTTTAGCTATGGCTTTGACGACGCTGTTTACTCGACT
ATCCAGACCATGGATTACTGGGACTCAGACCGCACCGGAAGTATTGAAGC
AAAAGAGGGCGGAACAGAGGAGGATGCTGAGAAGGCCAAAGGAGGACTGT
CTCAGGTATATGTACAAAAGCTGTAATTCCGTGATTACAGGCGCAGAAAC
ACCCCACCTCCGACTCCGCGATAAGACCTCGGTTGTTGCCTGGCTTATCC
GCATTGTATGCGACTTTGCAGTCTCCTACTCTCTTCCGTACCTACTCAAG
GCCCCGTATGCCGATCTTCAGTCCAAGGTTGGCTTTATCTATGGATCCCT
TGCAGCCCTGGGAGTGGTTTGCGGATACTTCTTCCTTCCCGAACTCACAG
GACGCTCCCTGGAGGAGCTGGAAGAGATGTGGCAGCGGCGCATCCCTGCG
CGAAAGTTCGCTGAGAAGGACAATGATTGCAGTCATGACCGCGGCTTTCA
ACCAACTGACCGGACAAGCCTTCGTCAGTCAGTATGGCAGTCTGTTCGTC
AAATCCCTAAATGTCATGAACCCGTTCGCCTTCACGCTATTATCCCGGGG
CATCTCGACCATGGGTCCTCTAGTTACCTTCTCCTTAGTTGACACCACTG
GAAGACGACCCATATACCTGATTGGCGGTACCATGACCACCGCCCTGCTC
ATGACTTGTGGTGGACTAGGGACAGGCACCATAACCGATGGCAAAAAGCG
TGGAGTTTGCGGGGTGCTCATGATGTACGGGCTGTTCTACATCATGTCAT
TCGGGTCTATCTTTCGAGAAACAGTTCGGCACCTACGATAACTCTACTGG
GGAATACGGGTTCAGTACCCAGCATTTGGCCTTCCTTAATTCCCTCGGTC
TGCCTGCGAAAGCGGCTGGCACATTTATCGGATGGGCAATTGGAGAGTAC
TACGGACGTCGAGCCTGCTTCATCGGCATGCAGCTGATGTGCATCGTTGG
TATCTCAGTCAGCTACAGCGCGACGACTTTCGGTCAGATCCTGGCCGGAC
GGATGATAGTGCAGTGTTTCATTGGCTGGGAGGACTGGCTTGTGCCCATG
TTCCTCGCTGAGATCAGTCCTAGTGTGGTACGTGGGGCGACGGTGGTGAT
ATACGTCTTTGCCCACATGTTTGGCTCATTTATTTGTGCTATCATCACGT
ATGAAACGGCCAAGTTAGAGGGAAACGTTGCTTGGAAAATCCCGATCGGT
GTGATGTGGGCGTTTCCCTGCTTCAATCTGCTCTGTAGTTGGCTGGTGCC
AGAAAGCCCTCGGTGGCTTGTCCGAAAGAACAAAATCCAGGCGGCGACGA
AACAGCTCGAATATCTGAACAAGGGGAAGGACATAGATGTTGCTGATGAA
GTGGCTTTCTTGCAGGCGTCTGTAGAGGCAAACGCACAGACGAAAGGTTC
CTGGGCTGAACTACTCCAGGGGACCAATCGAATGACAAGCTTAAAGAGCT
TACAGAATATGCGTCATGCTTTCACTTGGAATATGCTGATAGCATACGCT
CTCATTGCCACTAGTGTCTTTAGCTATGGCTTTGACGACGCTGTTTACTC
GACTATCCAGACCATGGATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012493-T1.utr3p1 | KJC3_012493-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012493-T1.utr5p1 | KJC3_012493-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3727466..3729630 - |
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