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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3745402..3747016- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012498-T1 ID=KJC3_012498-T1|Name=KJC3_012498-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1615bp|location=Sequence derived from alignment at ch8:3745402..3747016- (Aspergillus niger KJC3)
ATGGCCTCGATAAGGTCTCTGCTGAACCCCGATACCTCGTGCCCCAGTCT
CAATCCGGCAAGCTCACAGCGTGAACTGTCTTTACAGTCACCCCACTCAG
AAAGGAAGAAGGTCCCCAAAGATCAACCGTCCTTTAGGAGGGGCAAGGTC
CAGGGCGAAGTTCGCTATCGCGTTCACGATGAGCGCGACGAAGAGCTTAA
AACGATCCACCTGAAGCACAAGTTGTACCCCATAGGCAACATAGCAGACT
TTCCGGACCGCATCCCCTATACTAGCAAAAAAAGGTCTTTCAAGGAGCGG
ACAGGGAGGGAAGGCTTTGAAGGTGATTGTCCATGATCCTACTTCAAGCC
ATACGTTGACCGGGAGAGTCTTTTATAGTTTTCCATTACACGTTCGAGAT
GCCCGACAATCCCAAGACGTGGGTAATATCGTGGGATTATAACGTTGGAC
TTGTTCTCACGAGATCCCTGTTCAAGTGCAACGGCCATCCAAAGGTGTGT
CTTCCATAGCCTATGCATAACAGAGCAGACCTGATGGTTCCAGACCGCTC
CCGCGAAGGTGTTGAAGATGAACCCGGGCCTCGGCGATATTAGTCACAGC
ATCACGGGCGGCGCACTCGTCGGACAAGGTAAGCTTTAATTTCTATTCAA
AAATCTCCGCTAACCAGAGTCAAGGATACTGGATGCCATTTAGGGCTGCC
AAAGCGCTAGCAACCACATTTTGTTGGAACATTCGCTTCGTTCTGACGCC
CATGTTCGGCCTCGATTTTCCTGCGCAGTGCATTCCCCCAGATGACCCCC
GCTTTAACAACATGATCATCGATCCGGAGATAATCCGTCAAGCCGCGGAG
GATGTGGCTTACTACCGCAGCCTGGAGCCGCCGATTTCCCGACGTGGAAG
TAATAACAGCTTCCAAAAACCCGATCGAGACCAACAGAACAAAACCCGGA
AATCGTCGCCTTGCCAGCAGAAATATCAGAGCGTCTCTCCGCACGATATA
TATTGCGTTTCGCCCACTAGCTGCTCTAATAGTACATATATGCTGGCCGA
TACCCCATACACTGCCGACGGAAGCACTTCACCACGCGCAGTTTTCGGAC
GTGGGATGCGAGAGGAATTCCGGTCAGAGACAAGCTCGCAGCTTACCTTC
TATGGCTCCAGCTTATCGAGCAACCACCTCTCCGATGACGACCACAAGAG
AGGCAGTCAAGTTGAACTGCATGAGAATTACTATGGCAGCGATCTGCCCT
CAGCTGAGGTTTTCTCGGCTACAGGAATGGTTGGTGCTTGCTCCTGGCAG
CCAACGGATACTTGTGAGCCTGAGGCTTCTTTGGAGGGCTCTAGGGCAGC
CATTGCCGCGCATACGTTAATGGACTTGCGCAACAGCGGTATAAGATATG
GTATGTTGTAAGCTGACAGGATGGTTTCTGGTTCTTGTTAACTCTACATT
CTTGGAGGTGGTCATCATGTGGTCTTTTACTGACGAAACTGCGCTTCGGC
TGTTGGCAGGGTGGACGGGCGATGATGGCGTTATGGTTGCTTGATTAACT
GGATATGTAATGGCGCTGACTCATGTATTACACTTGGCTTAGAATAGACT
TGGTTTCGTTTCTAT back to topCoding sequence (CDS) from alignment at ch8:3745402..3747016- >KJC3_012498-T1 ID=KJC3_012498-T1|Name=KJC3_012498-T1|organism=Aspergillus niger KJC3|type=CDS|length=5040bp|location=Sequence derived from alignment at ch8:3745402..3747016- (Aspergillus niger KJC3)
GATACTGGATGCCATTTAGGGCTGCCAAAGCGCTAGCAACCACATTTTGT
TGGAACATTCGCTTCGTTCTGACGCCCATGTTCGGCCTCGATTTTCCTGC
GCAGTGCATTCCCCCAGATGACCCCCGCTTTAACAACATGATCATCGATC
CGGAGATAATCCGTCAAGCCGCGGAGGATGTGGCTTACTACCGCAGCCTG
GAGCCGCCGATTTCCCGACGTGGAAGTAATAACAGCTTCCAAAAACCCGA
TCGAGACCAACAGAACAAAACCCGGAAATCGTCGCCTTGCCAGCAGAAAT
ATCAGAGCGTCTCTCCGCACGATATATATTGCGTTTCGCCCACTAGCTGC
TCTAATAGTACATATATGCTGGCCGATACCCCATACACTGCCGACGGAAG
CACTTCACCACGCGCAGTTTTCGGACGTGGGATGCGAGAGGAATTCCGGT
CAGAGACAAGCTCGCAGCTTACCTTCTATGGCTCCAGCTTATCGAGCAAC
CACCTCTCCGATGACGACCACAAGAGAGGCAGTCAAGTTGAACTGCATGA
GAATTACTATGGCAGCGATCTGCCCTCAGCTGAGGTTTTCTCGGCTACAG
GAATGGTTGGTGCTTGCTCCTGGCAGCCAACGGATACTTGTGAGCCTGAG
GCTTCTTTGGAGGGCTCTAGGGCAGCCATTGCCGCGCATACGTTAATGGA
CTTGCGCAACAGCGGTATAAGATATGGTATGTTGTAAACCGCTCCCGCGA
AGGTGTTGAAGATGAACCCGGGCCTCGGCGATATTAGTCACAGCATCACG
GGCGGCGCACTCGTCGGACAAGTTTTCCATTACACGTTCGAGATGCCCGA
CAATCCCAAGACGTGGGTAATATCGTGGGATTATAACGTTGGACTTGTTC
TCACGAGATCCCTGTTCAAGTGCAACGGCCATCCAAAGATGGCCTCGATA
AGGTCTCTGCTGAACCCCGATACCTCGTGCCCCAGTCTCAATCCGGCAAG
CTCACAGCGTGAACTGTCTTTACAGTCACCCCACTCAGAAAGGAAGAAGG
TCCCCAAAGATCAACCGTCCTTTAGGAGGGGCAAGGTCCAGGGCGAAGTT
CGCTATCGCGTTCACGATGAGCGCGACGAAGAGCTTAAAACGATCCACCT
GAAGCACAAGTTGTACCCCATAGGCAACATAGCAGACTTTCCGGACCGCA
TCCCCTATACTAGCAAAAAAAGGTCTTTCAAGGAGCGGACAGGGAGGGAA
GGCTTTGAAGGATACTGGATGCCATTTAGGGCTGCCAAAGCGCTAGCAAC
CACATTTTGTTGGAACATTCGCTTCGTTCTGACGCCCATGTTCGGCCTCG
ATTTTCCTGCGCAGTGCATTCCCCCAGATGACCCCCGCTTTAACAACATG
ATCATCGATCCGGAGATAATCCGTCAAGCCGCGGAGGATGTGGCTTACTA
CCGCAGCCTGGAGCCGCCGATTTCCCGACGTGGAAGTAATAACAGCTTCC
AAAAACCCGATCGAGACCAACAGAACAAAACCCGGAAATCGTCGCCTTGC
CAGCAGAAATATCAGAGCGTCTCTCCGCACGATATATATTGCGTTTCGCC
CACTAGCTGCTCTAATAGTACATATATGCTGGCCGATACCCCATACACTG
CCGACGGAAGCACTTCACCACGCGCAGTTTTCGGACGTGGGATGCGAGAG
GAATTCCGGTCAGAGACAAGCTCGCAGCTTACCTTCTATGGCTCCAGCTT
ATCGAGCAACCACCTCTCCGATGACGACCACAAGAGAGGCAGTCAAGTTG
AACTGCATGAGAATTACTATGGCAGCGATCTGCCCTCAGCTGAGGTTTTC
TCGGCTACAGGAATGGTTGGTGCTTGCTCCTGGCAGCCAACGGATACTTG
TGAGCCTGAGGCTTCTTTGGAGGGCTCTAGGGCAGCCATTGCCGCGCATA
CGTTAATGGACTTGCGCAACAGCGGTATAAGATATGGTATGTTGTAAACC
GCTCCCGCGAAGGTGTTGAAGATGAACCCGGGCCTCGGCGATATTAGTCA
CAGCATCACGGGCGGCGCACTCGTCGGACAAGTTTTCCATTACACGTTCG
AGATGCCCGACAATCCCAAGACGTGGGTAATATCGTGGGATTATAACGTT
GGACTTGTTCTCACGAGATCCCTGTTCAAGTGCAACGGCCATCCAAAGAT
GGCCTCGATAAGGTCTCTGCTGAACCCCGATACCTCGTGCCCCAGTCTCA
ATCCGGCAAGCTCACAGCGTGAACTGTCTTTACAGTCACCCCACTCAGAA
AGGAAGAAGGTCCCCAAAGATCAACCGTCCTTTAGGAGGGGCAAGGTCCA
GGGCGAAGTTCGCTATCGCGTTCACGATGAGCGCGACGAAGAGCTTAAAA
CGATCCACCTGAAGCACAAGTTGTACCCCATAGGCAACATAGCAGACTTT
CCGGACCGCATCCCCTATACTAGCAAAAAAAGGTCTTTCAAGGAGCGGAC
AGGGAGGGAAGGCTTTGAAGGATACTGGATGCCATTTAGGGCTGCCAAAG
CGCTAGCAACCACATTTTGTTGGAACATTCGCTTCGTTCTGACGCCCATG
TTCGGCCTCGATTTTCCTGCGCAGTGCATTCCCCCAGATGACCCCCGCTT
TAACAACATGATCATCGATCCGGAGATAATCCGTCAAGCCGCGGAGGATG
TGGCTTACTACCGCAGCCTGGAGCCGCCGATTTCCCGACGTGGAAGTAAT
AACAGCTTCCAAAAACCCGATCGAGACCAACAGAACAAAACCCGGAAATC
GTCGCCTTGCCAGCAGAAATATCAGAGCGTCTCTCCGCACGATATATATT
GCGTTTCGCCCACTAGCTGCTCTAATAGTACATATATGCTGGCCGATACC
CCATACACTGCCGACGGAAGCACTTCACCACGCGCAGTTTTCGGACGTGG
GATGCGAGAGGAATTCCGGTCAGAGACAAGCTCGCAGCTTACCTTCTATG
GCTCCAGCTTATCGAGCAACCACCTCTCCGATGACGACCACAAGAGAGGC
AGTCAAGTTGAACTGCATGAGAATTACTATGGCAGCGATCTGCCCTCAGC
TGAGGTTTTCTCGGCTACAGGAATGGTTGGTGCTTGCTCCTGGCAGCCAA
CGGATACTTGTGAGCCTGAGGCTTCTTTGGAGGGCTCTAGGGCAGCCATT
GCCGCGCATACGTTAATGGACTTGCGCAACAGCGGTATAAGATATGGTAT
GTTGTAAACCGCTCCCGCGAAGGTGTTGAAGATGAACCCGGGCCTCGGCG
ATATTAGTCACAGCATCACGGGCGGCGCACTCGTCGGACAAGTTTTCCAT
TACACGTTCGAGATGCCCGACAATCCCAAGACGTGGGTAATATCGTGGGA
TTATAACGTTGGACTTGTTCTCACGAGATCCCTGTTCAAGTGCAACGGCC
ATCCAAAGATGGCCTCGATAAGGTCTCTGCTGAACCCCGATACCTCGTGC
CCCAGTCTCAATCCGGCAAGCTCACAGCGTGAACTGTCTTTACAGTCACC
CCACTCAGAAAGGAAGAAGGTCCCCAAAGATCAACCGTCCTTTAGGAGGG
GCAAGGTCCAGGGCGAAGTTCGCTATCGCGTTCACGATGAGCGCGACGAA
GAGCTTAAAACGATCCACCTGAAGCACAAGTTGTACCCCATAGGCAACAT
AGCAGACTTTCCGGACCGCATCCCCTATACTAGCAAAAAAAGGTCTTTCA
AGGAGCGGACAGGGAGGGAAGGCTTTGAAGGATACTGGATGCCATTTAGG
GCTGCCAAAGCGCTAGCAACCACATTTTGTTGGAACATTCGCTTCGTTCT
GACGCCCATGTTCGGCCTCGATTTTCCTGCGCAGTGCATTCCCCCAGATG
ACCCCCGCTTTAACAACATGATCATCGATCCGGAGATAATCCGTCAAGCC
GCGGAGGATGTGGCTTACTACCGCAGCCTGGAGCCGCCGATTTCCCGACG
TGGAAGTAATAACAGCTTCCAAAAACCCGATCGAGACCAACAGAACAAAA
CCCGGAAATCGTCGCCTTGCCAGCAGAAATATCAGAGCGTCTCTCCGCAC
GATATATATTGCGTTTCGCCCACTAGCTGCTCTAATAGTACATATATGCT
GGCCGATACCCCATACACTGCCGACGGAAGCACTTCACCACGCGCAGTTT
TCGGACGTGGGATGCGAGAGGAATTCCGGTCAGAGACAAGCTCGCAGCTT
ACCTTCTATGGCTCCAGCTTATCGAGCAACCACCTCTCCGATGACGACCA
CAAGAGAGGCAGTCAAGTTGAACTGCATGAGAATTACTATGGCAGCGATC
TGCCCTCAGCTGAGGTTTTCTCGGCTACAGGAATGGTTGGTGCTTGCTCC
TGGCAGCCAACGGATACTTGTGAGCCTGAGGCTTCTTTGGAGGGCTCTAG
GGCAGCCATTGCCGCGCATACGTTAATGGACTTGCGCAACAGCGGTATAA
GATATGGTATGTTGTAAACCGCTCCCGCGAAGGTGTTGAAGATGAACCCG
GGCCTCGGCGATATTAGTCACAGCATCACGGGCGGCGCACTCGTCGGACA
AGTTTTCCATTACACGTTCGAGATGCCCGACAATCCCAAGACGTGGGTAA
TATCGTGGGATTATAACGTTGGACTTGTTCTCACGAGATCCCTGTTCAAG
TGCAACGGCCATCCAAAGATGGCCTCGATAAGGTCTCTGCTGAACCCCGA
TACCTCGTGCCCCAGTCTCAATCCGGCAAGCTCACAGCGTGAACTGTCTT
TACAGTCACCCCACTCAGAAAGGAAGAAGGTCCCCAAAGATCAACCGTCC
TTTAGGAGGGGCAAGGTCCAGGGCGAAGTTCGCTATCGCGTTCACGATGA
GCGCGACGAAGAGCTTAAAACGATCCACCTGAAGCACAAGTTGTACCCCA
TAGGCAACATAGCAGACTTTCCGGACCGCATCCCCTATACTAGCAAAAAA
AGGTCTTTCAAGGAGCGGACAGGGAGGGAAGGCTTTGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012498-T1.utr3p1 | KJC3_012498-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003163 |
| DBxref | InterPro:IPR036887 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3745402..3747016 - |
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