|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3760145..3762173- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012502-T1 ID=KJC3_012502-T1|Name=KJC3_012502-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2029bp|location=Sequence derived from alignment at ch8:3760145..3762173- (Aspergillus niger KJC3)
CTTCTCTGTCTCCTGCGCGACTGCGACCAGAAGCCTGATCGAACTCTTAC
AGGTCATCCCACTGAAAAGTATACCTTGATCCCTTGAGAGTCATCACATT
CAAAACTCTTGTTCTCTGCTTCCATGGTATGATTGATGGCTGTGGCGATT
GTTATGACAACGCAAGCTGACTGTGCCAGTCTCACACTCCCGTGTCCATG
GATGCGCCATTAGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTATAT
AGACGACAATGGCAAATTACGCTTTGAGGCATCGCAATCAATCGCGAACA
ACTGCCAGACAATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGTGCG
GTGGCACTGTCGGGCAAAGGTGATCCATCCAAAATGCTCGGTAGGGTTCC
TTGTCGAGATCTCGCACGGATACCTTGTTGACACCAATACAACAGAAGAC
ATCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCCAGCGCCAGCGATCT
ATCAGCTAAACACATGTACTTGCGCCCTTTTTTGATCTCAACGCGACCCA
ACCACTGATCATCTTCAGGTTCCACTCCACTACAGAACCCCCTCAATCCA
AAAGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATGAGCATCACTTGT
CACCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGCAGATA
CTATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACTGTCGTATCCTCG
CCAAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACTATCCA
TACAATGGACGCAAGATTATATCCGGCTCATCGCAGCAATTTGATCCTGA
GCTGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGAACCAG
ACCATCTTCTCAAAGCGGGTGTGTTTTATCCTCGCTTTGCTCCCTGCATC
AGTCGCTCTAACCTTGGATATAGAACGTATTCGCCTGCTTGTCCATATCC
TCTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGGAGAAACTGAAGGAG
GCCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCATTCCCGT
TCTCGATGAGATCTACCACGTACGAGAGGAGGAGGAACGATACCTAGACG
GTCGAACAGGTAAGCGTTTTCTATCCACTATTGGTTCTTTCGGACACATC
TCATACTTAGCTACTGCAGATGGCTCCGCCGTGATTTGCGTTTCCCGCGT
CCACCTCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCGCCCACTCAGG
CCCTCAAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCCTGATCTCGAA
TCGCACACATCCGTCTTCCCTTCTACCGCCACCACCTCCCCGCTCACGTC
AAAGCCACCCACATCCAAGGCGTCAGACCCGTGCAAGCCTCCTATCCCTA
CAGCATGGGATACCGATGCATCGGCCTCGTTCGCGCCGATCAAGCGCCAC
CACGAGGGCGATTATCCCCTTGACCTCACCGGGGGAGCCATATTTCACCA
GGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACCCTGGATGCCA
ATCCTTATTCAATGAAGTATTACCCACACAGCCAAGCACAGCAGTCCTTA
CCTGTAATGGGGCTCTCTGGGGACCTCGGAAGCTGCACACATCCATACTA
CTTTAATTATTAGACTTCTCTTCCCTTTGTTATGGGTTTCCTTGTTTCCT
TTGTATCTCGGGTGCGGTTGGTGTTTTAGCAGGGCGTGATGACGGTCGTG
TCTCCTCTTTCTTTCCTTATTTCTTTTGTCCTCGTCTATCATGTAATGCG
GTTATTGGGAGGAACGGCCTAAAAGAAGGGACATACTCATATATCATAAT
ACTTACTTAATATTTCCACCAGTGCGGCGGGAGCACCATCACCCTCAGGA
TACATGCTTGCCTTCCCTTTCTTTTTTTTCGGTTGCGTCTTCTCAGGTAC
ATAAATAATGGAGGGGGGGCAAAGGGGAG back to topCoding sequence (CDS) from alignment at ch8:3760145..3762173- >KJC3_012502-T1 ID=KJC3_012502-T1|Name=KJC3_012502-T1|organism=Aspergillus niger KJC3|type=CDS|length=7884bp|location=Sequence derived from alignment at ch8:3760145..3762173- (Aspergillus niger KJC3)
ATGGCTCCGCCGTGATTTGCGTTTCCCGCGTCCACCTCCCAGAGCTCACC
GACTCCCAGGCTCTGGGCTCGCCCACTCAGGCCCTCAAGGAAAGCAATCC
CGTCTACAGGAAGGAAATTCCTGATCTCGAATCGCACACATCCGTCTTCC
CTTCTACCGCCACCACCTCCCCGCTCACGTCAAAGCCACCCACATCCAAG
GCGTCAGACCCGTGCAAGCCTCCTATCCCTACAGCATGGGATACCGATGC
ATCGGCCTCGTTCGCGCCGATCAAGCGCCACCACGAGGGCGATTATCCCC
TTGACCTCACCGGGGGAGCCATATTTCACCAGGAGCCGTCAGCGGCAGCG
GCAGCAGCCGCGACAACAACCCTGGATGCCAATCCTTATTCAATGAAGTA
TTACCCACACAGCCAAGCACAGCAGTCCTTACCTGTAATGGGGCTCTCTG
GGGACCTCGGAAGCTGCACACATCCATACTACTTTAATTATTAGAACGTA
TTCGCCTGCTTGTCCATATCCTCTGCGAGCTGCGTGAAAGTCACGCTATC
TGCGTGGAGAAACTGAAGGAGGCCGACCAGTCTGTTCGGCGCCAAATTGC
CCCCGTCGAACGCATTCCCGTTCTCGATGAGATCTACCACGTACGAGAGG
AGGAGGAACGATACCTAGACGGTCGAACAGGTTCCACTCCACTACAGAAC
CCCCTCAATCCAAAAGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATG
AGCATCACTTGTCACCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCT
TCTGCGCAGATACTATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACT
GTCGTATCCTCGCCAAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAG
GTTAACTATCCATACAATGGACGCAAGATTATATCCGGCTCATCGCAGCA
ATTTGATCCTGAGCTGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTC
ACCGCGAACCAGACCATCTTCTCAAAGCGGAAGACATCAGAGGGAGAAGC
CCACTCTCCCCAGAATCTCCCAGCGCCAGCGATCTATCAGCTAAACACAT
TCTCACACTCCCGTGTCCATGGATGCGCCATTAGACGGGCTGGCTTGTAT
GCACTTCGCCCTCATTTATATAGACGACAATGGCAAATTACGCTTTGAGG
CATCGCAATCAATCGCGAACAACTGCCAGACAATTCTCTCTCCCAGTGTG
ACGGAAAACTTTCTGCGTGCGGTGGCACTGTCGGGCAAAGGTGATCCATC
CAAAATGCTCGATGATGGCTCCGCCGTGATTTGCGTTTCCCGCGTCCACC
TCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCGCCCACTCAGGCCCTC
AAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCCTGATCTCGAATCGCA
CACATCCGTCTTCCCTTCTACCGCCACCACCTCCCCGCTCACGTCAAAGC
CACCCACATCCAAGGCGTCAGACCCGTGCAAGCCTCCTATCCCTACAGCA
TGGGATACCGATGCATCGGCCTCGTTCGCGCCGATCAAGCGCCACCACGA
GGGCGATTATCCCCTTGACCTCACCGGGGGAGCCATATTTCACCAGGAGC
CGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACCCTGGATGCCAATCCT
TATTCAATGAAGTATTACCCACACAGCCAAGCACAGCAGTCCTTACCTGT
AATGGGGCTCTCTGGGGACCTCGGAAGCTGCACACATCCATACTACTTTA
ATTATTAGAACGTATTCGCCTGCTTGTCCATATCCTCTGCGAGCTGCGTG
AAAGTCACGCTATCTGCGTGGAGAAACTGAAGGAGGCCGACCAGTCTGTT
CGGCGCCAAATTGCCCCCGTCGAACGCATTCCCGTTCTCGATGAGATCTA
CCACGTACGAGAGGAGGAGGAACGATACCTAGACGGTCGAACAGGTTCCA
CTCCACTACAGAACCCCCTCAATCCAAAAGGAAGCGGGTATCCCATGAAT
GCCTCGTCCCCATGAGCATCACTTGTCACCAAAAGTCCATGCTGCCCGTG
CGCAACACCGGCCTTCTGCGCAGATACTATGAGAAAGCCTTCGACAGCCT
GCAGCAGATTAACTGTCGTATCCTCGCCAAAGCATACATTAAGCTCGTGG
AACCCCGGAAGCAGGTTAACTATCCATACAATGGACGCAAGATTATATCC
GGCTCATCGCAGCAATTTGATCCTGAGCTGACCAAGCCAGCCTGGTGGCC
GGCGGGTGTCACTCACCGCGAACCAGACCATCTTCTCAAAGCGGAAGACA
TCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCCAGCGCCAGCGATCTA
TCAGCTAAACACATTCTCACACTCCCGTGTCCATGGATGCGCCATTAGAC
GGGCTGGCTTGTATGCACTTCGCCCTCATTTATATAGACGACAATGGCAA
ATTACGCTTTGAGGCATCGCAATCAATCGCGAACAACTGCCAGACAATTC
TCTCTCCCAGTGTGACGGAAAACTTTCTGCGTGCGGTGGCACTGTCGGGC
AAAGGTGATCCATCCAAAATGCTCGATGATGGCTCCGCCGTGATTTGCGT
TTCCCGCGTCCACCTCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCGC
CCACTCAGGCCCTCAAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCCT
GATCTCGAATCGCACACATCCGTCTTCCCTTCTACCGCCACCACCTCCCC
GCTCACGTCAAAGCCACCCACATCCAAGGCGTCAGACCCGTGCAAGCCTC
CTATCCCTACAGCATGGGATACCGATGCATCGGCCTCGTTCGCGCCGATC
AAGCGCCACCACGAGGGCGATTATCCCCTTGACCTCACCGGGGGAGCCAT
ATTTCACCAGGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACCC
TGGATGCCAATCCTTATTCAATGAAGTATTACCCACACAGCCAAGCACAG
CAGTCCTTACCTGTAATGGGGCTCTCTGGGGACCTCGGAAGCTGCACACA
TCCATACTACTTTAATTATTAGAACGTATTCGCCTGCTTGTCCATATCCT
CTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGGAGAAACTGAAGGAGG
CCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCATTCCCGTT
CTCGATGAGATCTACCACGTACGAGAGGAGGAGGAACGATACCTAGACGG
TCGAACAGGTTCCACTCCACTACAGAACCCCCTCAATCCAAAAGGAAGCG
GGTATCCCATGAATGCCTCGTCCCCATGAGCATCACTTGTCACCAAAAGT
CCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGCAGATACTATGAGAAA
GCCTTCGACAGCCTGCAGCAGATTAACTGTCGTATCCTCGCCAAAGCATA
CATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACTATCCATACAATGGAC
GCAAGATTATATCCGGCTCATCGCAGCAATTTGATCCTGAGCTGACCAAG
CCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGAACCAGACCATCTTCT
CAAAGCGGAAGACATCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCCA
GCGCCAGCGATCTATCAGCTAAACACATTCTCACACTCCCGTGTCCATGG
ATGCGCCATTAGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTATATA
GACGACAATGGCAAATTACGCTTTGAGGCATCGCAATCAATCGCGAACAA
CTGCCAGACAATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGTGCGG
TGGCACTGTCGGGCAAAGGTGATCCATCCAAAATGCTCGATGATGGCTCC
GCCGTGATTTGCGTTTCCCGCGTCCACCTCCCAGAGCTCACCGACTCCCA
GGCTCTGGGCTCGCCCACTCAGGCCCTCAAGGAAAGCAATCCCGTCTACA
GGAAGGAAATTCCTGATCTCGAATCGCACACATCCGTCTTCCCTTCTACC
GCCACCACCTCCCCGCTCACGTCAAAGCCACCCACATCCAAGGCGTCAGA
CCCGTGCAAGCCTCCTATCCCTACAGCATGGGATACCGATGCATCGGCCT
CGTTCGCGCCGATCAAGCGCCACCACGAGGGCGATTATCCCCTTGACCTC
ACCGGGGGAGCCATATTTCACCAGGAGCCGTCAGCGGCAGCGGCAGCAGC
CGCGACAACAACCCTGGATGCCAATCCTTATTCAATGAAGTATTACCCAC
ACAGCCAAGCACAGCAGTCCTTACCTGTAATGGGGCTCTCTGGGGACCTC
GGAAGCTGCACACATCCATACTACTTTAATTATTAGAACGTATTCGCCTG
CTTGTCCATATCCTCTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGGA
GAAACTGAAGGAGGCCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTCG
AACGCATTCCCGTTCTCGATGAGATCTACCACGTACGAGAGGAGGAGGAA
CGATACCTAGACGGTCGAACAGGTTCCACTCCACTACAGAACCCCCTCAA
TCCAAAAGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATGAGCATCAC
TTGTCACCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGCA
GATACTATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACTGTCGTATC
CTCGCCAAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACTA
TCCATACAATGGACGCAAGATTATATCCGGCTCATCGCAGCAATTTGATC
CTGAGCTGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGAA
CCAGACCATCTTCTCAAAGCGGAAGACATCAGAGGGAGAAGCCCACTCTC
CCCAGAATCTCCCAGCGCCAGCGATCTATCAGCTAAACACATTCTCACAC
TCCCGTGTCCATGGATGCGCCATTAGACGGGCTGGCTTGTATGCACTTCG
CCCTCATTTATATAGACGACAATGGCAAATTACGCTTTGAGGCATCGCAA
TCAATCGCGAACAACTGCCAGACAATTCTCTCTCCCAGTGTGACGGAAAA
CTTTCTGCGTGCGGTGGCACTGTCGGGCAAAGGTGATCCATCCAAAATGC
TCGATGATGGCTCCGCCGTGATTTGCGTTTCCCGCGTCCACCTCCCAGAG
CTCACCGACTCCCAGGCTCTGGGCTCGCCCACTCAGGCCCTCAAGGAAAG
CAATCCCGTCTACAGGAAGGAAATTCCTGATCTCGAATCGCACACATCCG
TCTTCCCTTCTACCGCCACCACCTCCCCGCTCACGTCAAAGCCACCCACA
TCCAAGGCGTCAGACCCGTGCAAGCCTCCTATCCCTACAGCATGGGATAC
CGATGCATCGGCCTCGTTCGCGCCGATCAAGCGCCACCACGAGGGCGATT
ATCCCCTTGACCTCACCGGGGGAGCCATATTTCACCAGGAGCCGTCAGCG
GCAGCGGCAGCAGCCGCGACAACAACCCTGGATGCCAATCCTTATTCAAT
GAAGTATTACCCACACAGCCAAGCACAGCAGTCCTTACCTGTAATGGGGC
TCTCTGGGGACCTCGGAAGCTGCACACATCCATACTACTTTAATTATTAG
AACGTATTCGCCTGCTTGTCCATATCCTCTGCGAGCTGCGTGAAAGTCAC
GCTATCTGCGTGGAGAAACTGAAGGAGGCCGACCAGTCTGTTCGGCGCCA
AATTGCCCCCGTCGAACGCATTCCCGTTCTCGATGAGATCTACCACGTAC
GAGAGGAGGAGGAACGATACCTAGACGGTCGAACAGGTTCCACTCCACTA
CAGAACCCCCTCAATCCAAAAGGAAGCGGGTATCCCATGAATGCCTCGTC
CCCATGAGCATCACTTGTCACCAAAAGTCCATGCTGCCCGTGCGCAACAC
CGGCCTTCTGCGCAGATACTATGAGAAAGCCTTCGACAGCCTGCAGCAGA
TTAACTGTCGTATCCTCGCCAAAGCATACATTAAGCTCGTGGAACCCCGG
AAGCAGGTTAACTATCCATACAATGGACGCAAGATTATATCCGGCTCATC
GCAGCAATTTGATCCTGAGCTGACCAAGCCAGCCTGGTGGCCGGCGGGTG
TCACTCACCGCGAACCAGACCATCTTCTCAAAGCGGAAGACATCAGAGGG
AGAAGCCCACTCTCCCCAGAATCTCCCAGCGCCAGCGATCTATCAGCTAA
ACACATTCTCACACTCCCGTGTCCATGGATGCGCCATTAGACGGGCTGGC
TTGTATGCACTTCGCCCTCATTTATATAGACGACAATGGCAAATTACGCT
TTGAGGCATCGCAATCAATCGCGAACAACTGCCAGACAATTCTCTCTCCC
AGTGTGACGGAAAACTTTCTGCGTGCGGTGGCACTGTCGGGCAAAGGTGA
TCCATCCAAAATGCTCGATGATGGCTCCGCCGTGATTTGCGTTTCCCGCG
TCCACCTCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCGCCCACTCAG
GCCCTCAAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCCTGATCTCGA
ATCGCACACATCCGTCTTCCCTTCTACCGCCACCACCTCCCCGCTCACGT
CAAAGCCACCCACATCCAAGGCGTCAGACCCGTGCAAGCCTCCTATCCCT
ACAGCATGGGATACCGATGCATCGGCCTCGTTCGCGCCGATCAAGCGCCA
CCACGAGGGCGATTATCCCCTTGACCTCACCGGGGGAGCCATATTTCACC
AGGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACCCTGGATGCC
AATCCTTATTCAATGAAGTATTACCCACACAGCCAAGCACAGCAGTCCTT
ACCTGTAATGGGGCTCTCTGGGGACCTCGGAAGCTGCACACATCCATACT
ACTTTAATTATTAGAACGTATTCGCCTGCTTGTCCATATCCTCTGCGAGC
TGCGTGAAAGTCACGCTATCTGCGTGGAGAAACTGAAGGAGGCCGACCAG
TCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCATTCCCGTTCTCGATGA
GATCTACCACGTACGAGAGGAGGAGGAACGATACCTAGACGGTCGAACAG
GTTCCACTCCACTACAGAACCCCCTCAATCCAAAAGGAAGCGGGTATCCC
ATGAATGCCTCGTCCCCATGAGCATCACTTGTCACCAAAAGTCCATGCTG
CCCGTGCGCAACACCGGCCTTCTGCGCAGATACTATGAGAAAGCCTTCGA
CAGCCTGCAGCAGATTAACTGTCGTATCCTCGCCAAAGCATACATTAAGC
TCGTGGAACCCCGGAAGCAGGTTAACTATCCATACAATGGACGCAAGATT
ATATCCGGCTCATCGCAGCAATTTGATCCTGAGCTGACCAAGCCAGCCTG
GTGGCCGGCGGGTGTCACTCACCGCGAACCAGACCATCTTCTCAAAGCGG
AAGACATCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCCAGCGCCAGC
GATCTATCAGCTAAACACATTCTCACACTCCCGTGTCCATGGATGCGCCA
TTAGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTATATAGACGACAA
TGGCAAATTACGCTTTGAGGCATCGCAATCAATCGCGAACAACTGCCAGA
CAATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGTGCGGTGGCACTG
TCGGGCAAAGGTGATCCATCCAAAATGCTCGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012502-T1.utr3p1 | KJC3_012502-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012502-T1.utr5p1 | KJC3_012502-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021264 |
| DBxref | PFAM:PF11001 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3760145..3762173 - |
|
