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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3803321..3806259+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012517-T1 ID=KJC3_012517-T1|Name=KJC3_012517-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2939bp|location=Sequence derived from alignment at ch8:3803321..3806259+ (Aspergillus niger KJC3)
GTGACCGCGGCGTGACTTTCGCCCTCGTTTGGATTCCCCCGCTCCCACAG
CATTCATTCAAAGATTGTTCCTGTGCGACTGGCACCTGCTTGACTACAAC
ACGGGCTACGAGTCTACTCACATTGCATTGCACTTGTCGCGTGCAGCTCA
AAACAAAATCAAGTGCCGGTGTTCCAGCGTTGCCCGAATTAATTGCACCT
TGTCCCAGCCCTCCACGGATTAACGTTCCCCGAATCGATTTAGGCAATCG
GAAAGGGCCACAGGGCAACATACCAGACCAGCCCGCCCCTAACTTCCCAC
TTCATCTGCCGTTGGTTCTTAATCCCCATTCTCGGAATCGCACGACCTCG
ACGTTTCGCATCCACGATTCGTGTCCATTCCGCTCGCACAGACAGTAAGT
TTTGTTCACCCACAGCTGCTGCATTGAGTCGTTGTCGTCATCGCCCGCGC
TCTAACAAGATCGCTGCTGCACAGGATAATCCATCACAATGCCTAAGAAA
GGAGGAAAGAACAAGGGCAAGGGCAAGAAGGGCGGTGGTGCTGCCGCGGC
CGCGAAGAAAGCAGTCGACGTCCAGAACAATGTGTGAGTTGAACTCAATT
GCGCCCCCAATTGTGCTGTTGTGTTGTCATTCGCAGGCTTATTTCGCACA
ATGACACTGACATTTTTCTCTCCGGAACAGTGCACCGGCCAACGAGGTTG
AGGAAACAGTCCCCAAGAGCGACAGTGAGATTGAAGCTGTCGCTACCGAG
GCAGGCGTCACTGACACTACTGTGCCTGAGACTGTCGTCCCCGAAACAGC
TACCAAGGAGGAAAGCGACGTTAAGGCTGGAGCCGACCTTGGTGTGACCA
CGGCGCCCGAGACCACCGTCCCTGAAATTGTCGCCAAGGGTGGTAGCGAA
GCCGCCGCGGCTGAAACTGGTCCTGCAGTTACTGCGGTACCCGAGGCCAC
CGTTACTGACACTACCGCACCTGTCCCCGCGGTTGCCCCTCCGGTTAACT
TCACTGAGGAGGCCTCAAATGCAGTCAATACCGCATTCCCCAAGGTAAAC
GATGGCATCACAGATGACGCTGCGCTGAAGACGAAGACTGCCCAGGAGGA
GACAGTGGAGGAGGGAACGAGTAAGTTGAGCTCAACGGTTGCGCATGTTG
CGCAGGGCTGATGGTTTACTAACGACGGTCCTCACCAGCTGTACTACCTT
CTACCTCCGCCCTCGAAGCTTCCAATGCGGATACCACATCCCTGCCAGTC
AGAACCAGTGCCCTCGAGCCCGAGACCGCCGATGCCCACGTGAAGCGCCC
CTACGAGAGCAGCGTCACCACCAAGGAGGACGACTACAAGCCTCACAAGA
TGCCCAAGGTGGAGGATGAACCAGCCATTGCCACCGAGAAGGCAGCCGCT
GCAGACACCGTTCAAGTTCCTAGTGGCACCACTGTCCAGCCACAGGTTGT
CCCCGGGCTTGGTGCTGGCTCCGCAGGTGAGGCATCGAAGGATTTGGAAG
TTCCCGGGCTTGCCGCGACGGGCAAGGATGCTGGAGCTACGTCCAGCACT
ACACTGCCTCAAACCACCGAGAGTGTCCCGGCAAAGGTTACCGAAGCGCC
ATCCGGCGTAGAGGCTGCTGGCACGACAGCTGTCGCTCCAGTGGAAGCTT
CTACCAAGCCAGAGACTGCTGCAGCCATCGCTCCCTCTGGAGCACCTACC
TCTGAAGCGCCAGAGAGCACTGGCGGTGCCAAGAAGGCGTCCGAGGAGGT
GACACAGCCGAGTCCAGCAGCGGCCACCAATGCCCCGACCGCAGCCGCAG
ACAGCGAGCCTATTGCTGTTGTTCCCAGCACCATCATTAGGCCCTCTGGA
CAGGAGAGCAGAGCGGCAGACCAGACTGTGGAGAAGTCCACTGCTGAACC
CGCTGCCTCTGAGGCAGAACAGCCCCTGAAGGCCGCGGAAGACAAGGAGC
AGGCGGCCAAGGCGCAGGAGTCTTCAAAGCGTCGCAGCGTTGTTCCCTCG
ACGATCAAGGACACGAAGCCTCAGCAGGAAGAAGCCCAGAAGTCTGAGAC
CCCGGCGACTCAAGGCGTATCGGCGGTTCAGAAAGAGGAAGGCGCTGCTG
CTCAGAAAGCCGAGGAGGTCAAGTCCGCGGAGCCTCAGACGGAAGGCACC
TCTACTGCTCAGCCCGAAACCGCTCAAGCTGGACAAGAGACCCAGCAAGC
GGGAAGCGCCGCTGCCCCGAAGGTTGAGGAAGGCAAGACGAGTGTTGAGC
AGGCCAAGGACACGGCGAAGGGCGAGGCCGGCAAGCCCCAGGAGACTGCC
AAGTCGGAAAGCAGCAAGGCCGAGAAGCGCAAGAGCGGACTCTTCGCCTG
GCTCAAGCGCAAGATCAAGGGTGAGAAGAACTAGAGTTCTGCCTTGTTTC
TATGCTCGTTTCCTGCCGGAGGATATTCTCCTCCGGAATGATCTTTTGGC
TCCTTTGGTGAGCGGTTGCCGACCCAGGAGCCCATATTGCTGATACCCCA
ACATGGATGATTGCATGGAGTGATGGATATTCAAAAAAAGGAAAACACAA
AACCCAATAAAAAATTGGAACAAGGGAAAAGAAAAAAAAAAAAAAAAATG
ATGCAGGCTAGGCAGAAAGATACCAGAGATAACATAACGCCATACTAGTA
TGATGATGGATGGCGGGTGTACGATATGAATGGCCAGGATAGGATACCAC
CAGGGATTGATTGCTTGATTGCTTGATTGGGCTGGACTGGGCTTTCTGAT
TGGGATGCTGCAAAGCAGTGTTTTGTATTTCGGACGGATGTATGGTTCAT
GTTCACATTCACGTTCATGTTGATGTTCATGTTCATCTGGGCTGGCTGCA
TGGGCCGAGACTGGGACGATGTGTATGTAATTGGCTTTTAATGGTAATGG
AGGGGAAATATGATGATTTTGATTATTGTTTTAATTGGG back to topCoding sequence (CDS) from alignment at ch8:3803321..3806259+ >KJC3_012517-T1 ID=KJC3_012517-T1|Name=KJC3_012517-T1|organism=Aspergillus niger KJC3|type=CDS|length=5193bp|location=Sequence derived from alignment at ch8:3803321..3806259+ (Aspergillus niger KJC3)
ATGCCTAAGAAAGGAGGAAAGAACAAGGGCAAGGGCAAGAAGGGCGGTGG
TGCTGCCGCGGCCGCGAAGAAAGCAGTCGACGTCCAGAACAATGTTGCAC
CGGCCAACGAGGTTGAGGAAACAGTCCCCAAGAGCGACAGTGAGATTGAA
GCTGTCGCTACCGAGGCAGGCGTCACTGACACTACTGTGCCTGAGACTGT
CGTCCCCGAAACAGCTACCAAGGAGGAAAGCGACGTTAAGGCTGGAGCCG
ACCTTGGTGTGACCACGGCGCCCGAGACCACCGTCCCTGAAATTGTCGCC
AAGGGTGGTAGCGAAGCCGCCGCGGCTGAAACTGGTCCTGCAGTTACTGC
GGTACCCGAGGCCACCGTTACTGACACTACCGCACCTGTCCCCGCGGTTG
CCCCTCCGGTTAACTTCACTGAGGAGGCCTCAAATGCAGTCAATACCGCA
TTCCCCAAGGTAAACGATGGCATCACAGATGACGCTGCGCTGAAGACGAA
GACTGCCCAGGAGGAGACAGTGGAGGAGGGAACGACTGTACTACCTTCTA
CCTCCGCCCTCGAAGCTTCCAATGCGGATACCACATCCCTGCCAGTCAGA
ACCAGTGCCCTCGAGCCCGAGACCGCCGATGCCCACGTGAAGCGCCCCTA
CGAGAGCAGCGTCACCACCAAGGAGGACGACTACAAGCCTCACAAGATGC
CCAAGGTGGAGGATGAACCAGCCATTGCCACCGAGAAGGCAGCCGCTGCA
GACACCGTTCAAGTTCCTAGTGGCACCACTGTCCAGCCACAGGTTGTCCC
CGGGCTTGGTGCTGGCTCCGCAGGTGAGGCATCGAAGGATTTGGAAGTTC
CCGGGCTTGCCGCGACGGGCAAGGATGCTGGAGCTACGTCCAGCACTACA
CTGCCTCAAACCACCGAGAGTGTCCCGGCAAAGGTTACCGAAGCGCCATC
CGGCGTAGAGGCTGCTGGCACGACAGCTGTCGCTCCAGTGGAAGCTTCTA
CCAAGCCAGAGACTGCTGCAGCCATCGCTCCCTCTGGAGCACCTACCTCT
GAAGCGCCAGAGAGCACTGGCGGTGCCAAGAAGGCGTCCGAGGAGGTGAC
ACAGCCGAGTCCAGCAGCGGCCACCAATGCCCCGACCGCAGCCGCAGACA
GCGAGCCTATTGCTGTTGTTCCCAGCACCATCATTAGGCCCTCTGGACAG
GAGAGCAGAGCGGCAGACCAGACTGTGGAGAAGTCCACTGCTGAACCCGC
TGCCTCTGAGGCAGAACAGCCCCTGAAGGCCGCGGAAGACAAGGAGCAGG
CGGCCAAGGCGCAGGAGTCTTCAAAGCGTCGCAGCGTTGTTCCCTCGACG
ATCAAGGACACGAAGCCTCAGCAGGAAGAAGCCCAGAAGTCTGAGACCCC
GGCGACTCAAGGCGTATCGGCGGTTCAGAAAGAGGAAGGCGCTGCTGCTC
AGAAAGCCGAGGAGGTCAAGTCCGCGGAGCCTCAGACGGAAGGCACCTCT
ACTGCTCAGCCCGAAACCGCTCAAGCTGGACAAGAGACCCAGCAAGCGGG
AAGCGCCGCTGCCCCGAAGGTTGAGGAAGGCAAGACGAGTGTTGAGCAGG
CCAAGGACACGGCGAAGGGCGAGGCCGGCAAGCCCCAGGAGACTGCCAAG
TCGGAAAGCAGCAAGGCCGAGAAGCGCAAGAGCGGACTCTTCGCCTGGCT
CAAGCGCAAGATCAAGGGTGAGAAGAACTAGATGCCTAAGAAAGGAGGAA
AGAACAAGGGCAAGGGCAAGAAGGGCGGTGGTGCTGCCGCGGCCGCGAAG
AAAGCAGTCGACGTCCAGAACAATGTTGCACCGGCCAACGAGGTTGAGGA
AACAGTCCCCAAGAGCGACAGTGAGATTGAAGCTGTCGCTACCGAGGCAG
GCGTCACTGACACTACTGTGCCTGAGACTGTCGTCCCCGAAACAGCTACC
AAGGAGGAAAGCGACGTTAAGGCTGGAGCCGACCTTGGTGTGACCACGGC
GCCCGAGACCACCGTCCCTGAAATTGTCGCCAAGGGTGGTAGCGAAGCCG
CCGCGGCTGAAACTGGTCCTGCAGTTACTGCGGTACCCGAGGCCACCGTT
ACTGACACTACCGCACCTGTCCCCGCGGTTGCCCCTCCGGTTAACTTCAC
TGAGGAGGCCTCAAATGCAGTCAATACCGCATTCCCCAAGGTAAACGATG
GCATCACAGATGACGCTGCGCTGAAGACGAAGACTGCCCAGGAGGAGACA
GTGGAGGAGGGAACGACTGTACTACCTTCTACCTCCGCCCTCGAAGCTTC
CAATGCGGATACCACATCCCTGCCAGTCAGAACCAGTGCCCTCGAGCCCG
AGACCGCCGATGCCCACGTGAAGCGCCCCTACGAGAGCAGCGTCACCACC
AAGGAGGACGACTACAAGCCTCACAAGATGCCCAAGGTGGAGGATGAACC
AGCCATTGCCACCGAGAAGGCAGCCGCTGCAGACACCGTTCAAGTTCCTA
GTGGCACCACTGTCCAGCCACAGGTTGTCCCCGGGCTTGGTGCTGGCTCC
GCAGGTGAGGCATCGAAGGATTTGGAAGTTCCCGGGCTTGCCGCGACGGG
CAAGGATGCTGGAGCTACGTCCAGCACTACACTGCCTCAAACCACCGAGA
GTGTCCCGGCAAAGGTTACCGAAGCGCCATCCGGCGTAGAGGCTGCTGGC
ACGACAGCTGTCGCTCCAGTGGAAGCTTCTACCAAGCCAGAGACTGCTGC
AGCCATCGCTCCCTCTGGAGCACCTACCTCTGAAGCGCCAGAGAGCACTG
GCGGTGCCAAGAAGGCGTCCGAGGAGGTGACACAGCCGAGTCCAGCAGCG
GCCACCAATGCCCCGACCGCAGCCGCAGACAGCGAGCCTATTGCTGTTGT
TCCCAGCACCATCATTAGGCCCTCTGGACAGGAGAGCAGAGCGGCAGACC
AGACTGTGGAGAAGTCCACTGCTGAACCCGCTGCCTCTGAGGCAGAACAG
CCCCTGAAGGCCGCGGAAGACAAGGAGCAGGCGGCCAAGGCGCAGGAGTC
TTCAAAGCGTCGCAGCGTTGTTCCCTCGACGATCAAGGACACGAAGCCTC
AGCAGGAAGAAGCCCAGAAGTCTGAGACCCCGGCGACTCAAGGCGTATCG
GCGGTTCAGAAAGAGGAAGGCGCTGCTGCTCAGAAAGCCGAGGAGGTCAA
GTCCGCGGAGCCTCAGACGGAAGGCACCTCTACTGCTCAGCCCGAAACCG
CTCAAGCTGGACAAGAGACCCAGCAAGCGGGAAGCGCCGCTGCCCCGAAG
GTTGAGGAAGGCAAGACGAGTGTTGAGCAGGCCAAGGACACGGCGAAGGG
CGAGGCCGGCAAGCCCCAGGAGACTGCCAAGTCGGAAAGCAGCAAGGCCG
AGAAGCGCAAGAGCGGACTCTTCGCCTGGCTCAAGCGCAAGATCAAGGGT
GAGAAGAACTAGATGCCTAAGAAAGGAGGAAAGAACAAGGGCAAGGGCAA
GAAGGGCGGTGGTGCTGCCGCGGCCGCGAAGAAAGCAGTCGACGTCCAGA
ACAATGTTGCACCGGCCAACGAGGTTGAGGAAACAGTCCCCAAGAGCGAC
AGTGAGATTGAAGCTGTCGCTACCGAGGCAGGCGTCACTGACACTACTGT
GCCTGAGACTGTCGTCCCCGAAACAGCTACCAAGGAGGAAAGCGACGTTA
AGGCTGGAGCCGACCTTGGTGTGACCACGGCGCCCGAGACCACCGTCCCT
GAAATTGTCGCCAAGGGTGGTAGCGAAGCCGCCGCGGCTGAAACTGGTCC
TGCAGTTACTGCGGTACCCGAGGCCACCGTTACTGACACTACCGCACCTG
TCCCCGCGGTTGCCCCTCCGGTTAACTTCACTGAGGAGGCCTCAAATGCA
GTCAATACCGCATTCCCCAAGGTAAACGATGGCATCACAGATGACGCTGC
GCTGAAGACGAAGACTGCCCAGGAGGAGACAGTGGAGGAGGGAACGACTG
TACTACCTTCTACCTCCGCCCTCGAAGCTTCCAATGCGGATACCACATCC
CTGCCAGTCAGAACCAGTGCCCTCGAGCCCGAGACCGCCGATGCCCACGT
GAAGCGCCCCTACGAGAGCAGCGTCACCACCAAGGAGGACGACTACAAGC
CTCACAAGATGCCCAAGGTGGAGGATGAACCAGCCATTGCCACCGAGAAG
GCAGCCGCTGCAGACACCGTTCAAGTTCCTAGTGGCACCACTGTCCAGCC
ACAGGTTGTCCCCGGGCTTGGTGCTGGCTCCGCAGGTGAGGCATCGAAGG
ATTTGGAAGTTCCCGGGCTTGCCGCGACGGGCAAGGATGCTGGAGCTACG
TCCAGCACTACACTGCCTCAAACCACCGAGAGTGTCCCGGCAAAGGTTAC
CGAAGCGCCATCCGGCGTAGAGGCTGCTGGCACGACAGCTGTCGCTCCAG
TGGAAGCTTCTACCAAGCCAGAGACTGCTGCAGCCATCGCTCCCTCTGGA
GCACCTACCTCTGAAGCGCCAGAGAGCACTGGCGGTGCCAAGAAGGCGTC
CGAGGAGGTGACACAGCCGAGTCCAGCAGCGGCCACCAATGCCCCGACCG
CAGCCGCAGACAGCGAGCCTATTGCTGTTGTTCCCAGCACCATCATTAGG
CCCTCTGGACAGGAGAGCAGAGCGGCAGACCAGACTGTGGAGAAGTCCAC
TGCTGAACCCGCTGCCTCTGAGGCAGAACAGCCCCTGAAGGCCGCGGAAG
ACAAGGAGCAGGCGGCCAAGGCGCAGGAGTCTTCAAAGCGTCGCAGCGTT
GTTCCCTCGACGATCAAGGACACGAAGCCTCAGCAGGAAGAAGCCCAGAA
GTCTGAGACCCCGGCGACTCAAGGCGTATCGGCGGTTCAGAAAGAGGAAG
GCGCTGCTGCTCAGAAAGCCGAGGAGGTCAAGTCCGCGGAGCCTCAGACG
GAAGGCACCTCTACTGCTCAGCCCGAAACCGCTCAAGCTGGACAAGAGAC
CCAGCAAGCGGGAAGCGCCGCTGCCCCGAAGGTTGAGGAAGGCAAGACGA
GTGTTGAGCAGGCCAAGGACACGGCGAAGGGCGAGGCCGGCAAGCCCCAG
GAGACTGCCAAGTCGGAAAGCAGCAAGGCCGAGAAGCGCAAGAGCGGACT
CTTCGCCTGGCTCAAGCGCAAGATCAAGGGTGAGAAGAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012517-T1.utr3p1 | KJC3_012517-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch8 | supercontig | ch8:3803321..3806259 + |
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