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KJC3_012535-T1, KJC3_012535-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012535-T1
Unique NameKJC3_012535-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3851776..3854467-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012535-T1 ID=KJC3_012535-T1|Name=KJC3_012535-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2692bp|location=Sequence derived from alignment at ch8:3851776..3854467- (Aspergillus niger KJC3)
CGGCAATGTCTTGTTATGTGGGTTATTATTACACTCAGTAAAGAATCAGC
GGTGGGAACAAATGTGGATAATAACTATGCGCCATGTTCATATTTCTCTA
GGTTTCCCTGATGCTGGGTGTAATCCAAACACCCCGGCCACCTAGCGTTT
CAGCGGAGGGCCCCACCCATATTCCGGGGTAACAACCCTCCGAACAAAGG
CGGGACCTGCATCGGCCTGCCTGATCCGGTTGTCGGCGAGGCTATTCCCA
CTTTATGGCAGGGTGGTTACACAAGCCCCTCCAATCTGTGTGCGGGTCAG
CCACTCCCTCTTCGGTCTTCTTTCACAGTGCCTGCAGCACCTGATGTATC
CACACTGTCGAGCAAGCCACTCCTGCCATACCGGACTTCTATCTCCGCTC
ATGAAGTGGTGGCGTAATTCAGCATGCCTCCACCAGTTTAACATAAGTAT
CATGTCGATGCTGTCACGGCGTTGGGCCTTCATTAATGTCATAGTAGCAC
ATCAAATTTGCCCTCCATGCATCAAGTGGACAGGTGAAGTCTCATATAGA
CCCAATAAGGCAATCACTACCATGGGTCAAGACACTTGTCATATTTCAAA
CATCGTCAGTCCCCATTGTCAACCAAATCAACTTACCAGGCCAATAGGTA
GTGTGCTGACAGGGGGAAGATGGTTGGTGACCTCTTTGAAGTCATTCACA
AGTATGTTGTGGTTACATTCATGCAGGTCTGCTTTCACCGCTGGTGACAG
ATTTCTTCAAGCCCATCAGCAGCACAGACAAACAGAACATGAGTATAAGT
ACGGAAGCAGATGACCCTCCGTCACTCTCTACCTGCACCACATGTCGACT
GGTTCGCTCTTCATTCCTTATCAAACTTGCCTTGCTAGTATATCAAGGCT
GACTCTCCTTCGACCTGCATTCACCTATCCCATTCCATTCTTGTTGATCA
TTTTTGGATTCTTCTTCTCCTTCTGTTGACATGAAGCTTTTCTCTATTCT
ACTTGTGGCCTTGGTCTCGTTGGTCAGCGGTGCTCACCACCACCGCCACC
GCCACATGAATGATCCAGCTCCAGCTAGTTTTCCCGGACCTCACCACCAG
CACCATGGCATCCCACCCCACAAGCTGGTAGCGCGCAACACCAGCGCGGA
ATACAAGTCCATTGCTTACTTTGTTAACTGGGTGAGTCACCCCATCCGCC
TGTCATACAGATGCTTGGTCTTTTACTCATCGAGCAAAGGCAATTTACGG
CAGGAACCACAATCCCCAGGACATCCCCATCGATAAACTGACCCACATCC
TCTACGCGTTCGCCAACGTCCGCGCCAACGGCGAAGTCTACCTTTCCGAT
CCATGGTCCGACATCGATAAGCGCTTTCCTGGTGATTCATGGAGTGATAC
CGGAAACAACGTTTACGGATGTGTTAAGCAACTTAATCTCTTAAAGCAGA
AGAATCGTAATCTCAAGGTGCTTCTATCGATCGGAGGCTGGACATACTCG
AGCAATTTTGTGACCCCAGCGAGTACAGATCAAGGCAGGAAGACTTTCGC
TTCTTCGGCTGTCAAGTTGCTGGCCGACTTGGGCTTTGATGGATTAGATA
TTGATTGGGAGGTATATATCTATATGATGGTTATTGGTTCTTCCTTTATA
ACCGTGCTAACATGTCTACTTCTCTGTAGTACCCTGCCAATGAAGCCCAG
GCTACAGACATGGTTCTACTCCTACGCGAGATCCGAGAGGTAGGCTTTGC
CTTGCCCCTACCATACCGATCAATCACCCACTAACCATGAGCAGGAACTA
GACGAATACGGCCGCGAACACGGCAACGGAACCCATTTCCTCCTAAGCAT
AGCCACCTCAGCAGGTCCCTCAAAATACAATACCCTCCACATATCCAGTA
TGAACCTCTACCTCGACTTCTGGAACCTAATGGCCTACGACTACGCCGGC
AGCTGGGATGCAACTGCAGGACACCAGGCCAACCTCTACCCATTACGGGA
TGACCCTGTCTCAACCCCCTTCAACACGGATCAAGCCATCTCCGCGTACC
TGACCGCCGGTGTTCCCGCCCATAAACTCATTCTCGGTATGCCGCTCTAT
GGGCGCGCCTTCACAAACACCGACGGACCGGGCAAGCCGTTTAATGGTGT
TGGTCAGGGAAGCTGGGAGAATGGGGTCTGGGACTACAAAGCGCTTCCTC
CTGCAGGGGCTAGTGTTTCTGAGTTGAGAAGTATTGGTGCGAGCTACTCG
TATGATGCTGGCAAAAAGACGATGATTAGTTATGATACCCCTGCTGTTGC
GAGGCAGAAGGCGGATTATATCAGAAGTAAAGGTCTCGGGGGTGCGATGT
GGTGGGAGACTTCTGGGGACAAGGTGGGAGTGGAGAGTTTGATTTCTACG
GTAAGATGGTTTATATCCTTTCTTCTCTGGAGGAGAGTTGTGACTGACGA
AGCAATATAGGTCGTGGATTCACTAGGTGGTATTGGCGCTCTGGATAAGT
CGGTCAATCACCTGGAGTATCCCGAGTCGCAGTATGACAATGTGAAGAAG
GGGTTCCATTGAATTGTGAGGGGCAGGCACCGATACAGGTTATTGTGAGA
CGATAGATTGTTAGATATTGTGGGAAGAGATGCTTATGGTCTTGTCAGTA
CATCTAGAATAGATGAACTCATTGGATTGTTGTCGCGAGACA
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Coding sequence (CDS) from alignment at ch8:3851776..3854467-

>KJC3_012535-T1 ID=KJC3_012535-T1|Name=KJC3_012535-T1|organism=Aspergillus niger KJC3|type=CDS|length=6705bp|location=Sequence derived from alignment at ch8:3851776..3854467- (Aspergillus niger KJC3)
GTCGTGGATTCACTAGGTGGTATTGGCGCTCTGGATAAGTCGGTCAATCA
CCTGGAGTATCCCGAGTCGCAGTATGACAATGTGAAGAAGGGGTTCCATT
GAGAACTAGACGAATACGGCCGCGAACACGGCAACGGAACCCATTTCCTC
CTAAGCATAGCCACCTCAGCAGGTCCCTCAAAATACAATACCCTCCACAT
ATCCAGTATGAACCTCTACCTCGACTTCTGGAACCTAATGGCCTACGACT
ACGCCGGCAGCTGGGATGCAACTGCAGGACACCAGGCCAACCTCTACCCA
TTACGGGATGACCCTGTCTCAACCCCCTTCAACACGGATCAAGCCATCTC
CGCGTACCTGACCGCCGGTGTTCCCGCCCATAAACTCATTCTCGGTATGC
CGCTCTATGGGCGCGCCTTCACAAACACCGACGGACCGGGCAAGCCGTTT
AATGGTGTTGGTCAGGGAAGCTGGGAGAATGGGGTCTGGGACTACAAAGC
GCTTCCTCCTGCAGGGGCTAGTGTTTCTGAGTTGAGAAGTATTGGTGCGA
GCTACTCGTATGATGCTGGCAAAAAGACGATGATTAGTTATGATACCCCT
GCTGTTGCGAGGCAGAAGGCGGATTATATCAGAAGTAAAGGTCTCGGGGG
TGCGATGTGGTGGGAGACTTCTGGGGACAAGGTGGGAGTGGAGAGTTTGA
TTTCTACGTACCCTGCCAATGAAGCCCAGGCTACAGACATGGTTCTACTC
CTACGCGAGATCCGAGAGGCAATTTACGGCAGGAACCACAATCCCCAGGA
CATCCCCATCGATAAACTGACCCACATCCTCTACGCGTTCGCCAACGTCC
GCGCCAACGGCGAAGTCTACCTTTCCGATCCATGGTCCGACATCGATAAG
CGCTTTCCTGGTGATTCATGGAGTGATACCGGAAACAACGTTTACGGATG
TGTTAAGCAACTTAATCTCTTAAAGCAGAAGAATCGTAATCTCAAGGTGC
TTCTATCGATCGGAGGCTGGACATACTCGAGCAATTTTGTGACCCCAGCG
AGTACAGATCAAGGCAGGAAGACTTTCGCTTCTTCGGCTGTCAAGTTGCT
GGCCGACTTGGGCTTTGATGGATTAGATATTGATTGGGAGATGAAGCTTT
TCTCTATTCTACTTGTGGCCTTGGTCTCGTTGGTCAGCGGTGCTCACCAC
CACCGCCACCGCCACATGAATGATCCAGCTCCAGCTAGTTTTCCCGGACC
TCACCACCAGCACCATGGCATCCCACCCCACAAGCTGGTAGCGCGCAACA
CCAGCGCGGAATACAAGTCCATTGCTTACTTTGTTAACTGGGTCGTGGAT
TCACTAGGTGGTATTGGCGCTCTGGATAAGTCGGTCAATCACCTGGAGTA
TCCCGAGTCGCAGTATGACAATGTGAAGAAGGGGTTCCATTGAGAACTAG
ACGAATACGGCCGCGAACACGGCAACGGAACCCATTTCCTCCTAAGCATA
GCCACCTCAGCAGGTCCCTCAAAATACAATACCCTCCACATATCCAGTAT
GAACCTCTACCTCGACTTCTGGAACCTAATGGCCTACGACTACGCCGGCA
GCTGGGATGCAACTGCAGGACACCAGGCCAACCTCTACCCATTACGGGAT
GACCCTGTCTCAACCCCCTTCAACACGGATCAAGCCATCTCCGCGTACCT
GACCGCCGGTGTTCCCGCCCATAAACTCATTCTCGGTATGCCGCTCTATG
GGCGCGCCTTCACAAACACCGACGGACCGGGCAAGCCGTTTAATGGTGTT
GGTCAGGGAAGCTGGGAGAATGGGGTCTGGGACTACAAAGCGCTTCCTCC
TGCAGGGGCTAGTGTTTCTGAGTTGAGAAGTATTGGTGCGAGCTACTCGT
ATGATGCTGGCAAAAAGACGATGATTAGTTATGATACCCCTGCTGTTGCG
AGGCAGAAGGCGGATTATATCAGAAGTAAAGGTCTCGGGGGTGCGATGTG
GTGGGAGACTTCTGGGGACAAGGTGGGAGTGGAGAGTTTGATTTCTACGT
ACCCTGCCAATGAAGCCCAGGCTACAGACATGGTTCTACTCCTACGCGAG
ATCCGAGAGGCAATTTACGGCAGGAACCACAATCCCCAGGACATCCCCAT
CGATAAACTGACCCACATCCTCTACGCGTTCGCCAACGTCCGCGCCAACG
GCGAAGTCTACCTTTCCGATCCATGGTCCGACATCGATAAGCGCTTTCCT
GGTGATTCATGGAGTGATACCGGAAACAACGTTTACGGATGTGTTAAGCA
ACTTAATCTCTTAAAGCAGAAGAATCGTAATCTCAAGGTGCTTCTATCGA
TCGGAGGCTGGACATACTCGAGCAATTTTGTGACCCCAGCGAGTACAGAT
CAAGGCAGGAAGACTTTCGCTTCTTCGGCTGTCAAGTTGCTGGCCGACTT
GGGCTTTGATGGATTAGATATTGATTGGGAGATGAAGCTTTTCTCTATTC
TACTTGTGGCCTTGGTCTCGTTGGTCAGCGGTGCTCACCACCACCGCCAC
CGCCACATGAATGATCCAGCTCCAGCTAGTTTTCCCGGACCTCACCACCA
GCACCATGGCATCCCACCCCACAAGCTGGTAGCGCGCAACACCAGCGCGG
AATACAAGTCCATTGCTTACTTTGTTAACTGGGTCGTGGATTCACTAGGT
GGTATTGGCGCTCTGGATAAGTCGGTCAATCACCTGGAGTATCCCGAGTC
GCAGTATGACAATGTGAAGAAGGGGTTCCATTGAGAACTAGACGAATACG
GCCGCGAACACGGCAACGGAACCCATTTCCTCCTAAGCATAGCCACCTCA
GCAGGTCCCTCAAAATACAATACCCTCCACATATCCAGTATGAACCTCTA
CCTCGACTTCTGGAACCTAATGGCCTACGACTACGCCGGCAGCTGGGATG
CAACTGCAGGACACCAGGCCAACCTCTACCCATTACGGGATGACCCTGTC
TCAACCCCCTTCAACACGGATCAAGCCATCTCCGCGTACCTGACCGCCGG
TGTTCCCGCCCATAAACTCATTCTCGGTATGCCGCTCTATGGGCGCGCCT
TCACAAACACCGACGGACCGGGCAAGCCGTTTAATGGTGTTGGTCAGGGA
AGCTGGGAGAATGGGGTCTGGGACTACAAAGCGCTTCCTCCTGCAGGGGC
TAGTGTTTCTGAGTTGAGAAGTATTGGTGCGAGCTACTCGTATGATGCTG
GCAAAAAGACGATGATTAGTTATGATACCCCTGCTGTTGCGAGGCAGAAG
GCGGATTATATCAGAAGTAAAGGTCTCGGGGGTGCGATGTGGTGGGAGAC
TTCTGGGGACAAGGTGGGAGTGGAGAGTTTGATTTCTACGTACCCTGCCA
ATGAAGCCCAGGCTACAGACATGGTTCTACTCCTACGCGAGATCCGAGAG
GCAATTTACGGCAGGAACCACAATCCCCAGGACATCCCCATCGATAAACT
GACCCACATCCTCTACGCGTTCGCCAACGTCCGCGCCAACGGCGAAGTCT
ACCTTTCCGATCCATGGTCCGACATCGATAAGCGCTTTCCTGGTGATTCA
TGGAGTGATACCGGAAACAACGTTTACGGATGTGTTAAGCAACTTAATCT
CTTAAAGCAGAAGAATCGTAATCTCAAGGTGCTTCTATCGATCGGAGGCT
GGACATACTCGAGCAATTTTGTGACCCCAGCGAGTACAGATCAAGGCAGG
AAGACTTTCGCTTCTTCGGCTGTCAAGTTGCTGGCCGACTTGGGCTTTGA
TGGATTAGATATTGATTGGGAGATGAAGCTTTTCTCTATTCTACTTGTGG
CCTTGGTCTCGTTGGTCAGCGGTGCTCACCACCACCGCCACCGCCACATG
AATGATCCAGCTCCAGCTAGTTTTCCCGGACCTCACCACCAGCACCATGG
CATCCCACCCCACAAGCTGGTAGCGCGCAACACCAGCGCGGAATACAAGT
CCATTGCTTACTTTGTTAACTGGGTCGTGGATTCACTAGGTGGTATTGGC
GCTCTGGATAAGTCGGTCAATCACCTGGAGTATCCCGAGTCGCAGTATGA
CAATGTGAAGAAGGGGTTCCATTGAGAACTAGACGAATACGGCCGCGAAC
ACGGCAACGGAACCCATTTCCTCCTAAGCATAGCCACCTCAGCAGGTCCC
TCAAAATACAATACCCTCCACATATCCAGTATGAACCTCTACCTCGACTT
CTGGAACCTAATGGCCTACGACTACGCCGGCAGCTGGGATGCAACTGCAG
GACACCAGGCCAACCTCTACCCATTACGGGATGACCCTGTCTCAACCCCC
TTCAACACGGATCAAGCCATCTCCGCGTACCTGACCGCCGGTGTTCCCGC
CCATAAACTCATTCTCGGTATGCCGCTCTATGGGCGCGCCTTCACAAACA
CCGACGGACCGGGCAAGCCGTTTAATGGTGTTGGTCAGGGAAGCTGGGAG
AATGGGGTCTGGGACTACAAAGCGCTTCCTCCTGCAGGGGCTAGTGTTTC
TGAGTTGAGAAGTATTGGTGCGAGCTACTCGTATGATGCTGGCAAAAAGA
CGATGATTAGTTATGATACCCCTGCTGTTGCGAGGCAGAAGGCGGATTAT
ATCAGAAGTAAAGGTCTCGGGGGTGCGATGTGGTGGGAGACTTCTGGGGA
CAAGGTGGGAGTGGAGAGTTTGATTTCTACGTACCCTGCCAATGAAGCCC
AGGCTACAGACATGGTTCTACTCCTACGCGAGATCCGAGAGGCAATTTAC
GGCAGGAACCACAATCCCCAGGACATCCCCATCGATAAACTGACCCACAT
CCTCTACGCGTTCGCCAACGTCCGCGCCAACGGCGAAGTCTACCTTTCCG
ATCCATGGTCCGACATCGATAAGCGCTTTCCTGGTGATTCATGGAGTGAT
ACCGGAAACAACGTTTACGGATGTGTTAAGCAACTTAATCTCTTAAAGCA
GAAGAATCGTAATCTCAAGGTGCTTCTATCGATCGGAGGCTGGACATACT
CGAGCAATTTTGTGACCCCAGCGAGTACAGATCAAGGCAGGAAGACTTTC
GCTTCTTCGGCTGTCAAGTTGCTGGCCGACTTGGGCTTTGATGGATTAGA
TATTGATTGGGAGATGAAGCTTTTCTCTATTCTACTTGTGGCCTTGGTCT
CGTTGGTCAGCGGTGCTCACCACCACCGCCACCGCCACATGAATGATCCA
GCTCCAGCTAGTTTTCCCGGACCTCACCACCAGCACCATGGCATCCCACC
CCACAAGCTGGTAGCGCGCAACACCAGCGCGGAATACAAGTCCATTGCTT
ACTTTGTTAACTGGGTCGTGGATTCACTAGGTGGTATTGGCGCTCTGGAT
AAGTCGGTCAATCACCTGGAGTATCCCGAGTCGCAGTATGACAATGTGAA
GAAGGGGTTCCATTGAGAACTAGACGAATACGGCCGCGAACACGGCAACG
GAACCCATTTCCTCCTAAGCATAGCCACCTCAGCAGGTCCCTCAAAATAC
AATACCCTCCACATATCCAGTATGAACCTCTACCTCGACTTCTGGAACCT
AATGGCCTACGACTACGCCGGCAGCTGGGATGCAACTGCAGGACACCAGG
CCAACCTCTACCCATTACGGGATGACCCTGTCTCAACCCCCTTCAACACG
GATCAAGCCATCTCCGCGTACCTGACCGCCGGTGTTCCCGCCCATAAACT
CATTCTCGGTATGCCGCTCTATGGGCGCGCCTTCACAAACACCGACGGAC
CGGGCAAGCCGTTTAATGGTGTTGGTCAGGGAAGCTGGGAGAATGGGGTC
TGGGACTACAAAGCGCTTCCTCCTGCAGGGGCTAGTGTTTCTGAGTTGAG
AAGTATTGGTGCGAGCTACTCGTATGATGCTGGCAAAAAGACGATGATTA
GTTATGATACCCCTGCTGTTGCGAGGCAGAAGGCGGATTATATCAGAAGT
AAAGGTCTCGGGGGTGCGATGTGGTGGGAGACTTCTGGGGACAAGGTGGG
AGTGGAGAGTTTGATTTCTACGTACCCTGCCAATGAAGCCCAGGCTACAG
ACATGGTTCTACTCCTACGCGAGATCCGAGAGGCAATTTACGGCAGGAAC
CACAATCCCCAGGACATCCCCATCGATAAACTGACCCACATCCTCTACGC
GTTCGCCAACGTCCGCGCCAACGGCGAAGTCTACCTTTCCGATCCATGGT
CCGACATCGATAAGCGCTTTCCTGGTGATTCATGGAGTGATACCGGAAAC
AACGTTTACGGATGTGTTAAGCAACTTAATCTCTTAAAGCAGAAGAATCG
TAATCTCAAGGTGCTTCTATCGATCGGAGGCTGGACATACTCGAGCAATT
TTGTGACCCCAGCGAGTACAGATCAAGGCAGGAAGACTTTCGCTTCTTCG
GCTGTCAAGTTGCTGGCCGACTTGGGCTTTGATGGATTAGATATTGATTG
GGAGATGAAGCTTTTCTCTATTCTACTTGTGGCCTTGGTCTCGTTGGTCA
GCGGTGCTCACCACCACCGCCACCGCCACATGAATGATCCAGCTCCAGCT
AGTTTTCCCGGACCTCACCACCAGCACCATGGCATCCCACCCCACAAGCT
GGTAGCGCGCAACACCAGCGCGGAATACAAGTCCATTGCTTACTTTGTTA
ACTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CHIB1_4KJC3_012535Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012535-T1KJC3_012535-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012535-T1.cdsKJC3_012535-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012535-T1.utr3p1KJC3_012535-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012535-T1.exon6KJC3_012535-T1.exon6Aspergillus niger KJC3exon
KJC3_012535-T1.exon5KJC3_012535-T1.exon5Aspergillus niger KJC3exon
KJC3_012535-T1.exon4KJC3_012535-T1.exon4Aspergillus niger KJC3exon
KJC3_012535-T1.exon3KJC3_012535-T1.exon3Aspergillus niger KJC3exon
KJC3_012535-T1.exon2KJC3_012535-T1.exon2Aspergillus niger KJC3exon
KJC3_012535-T1.exon1KJC3_012535-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012535-T1.utr5p2KJC3_012535-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012535-T1.utr5p1KJC3_012535-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
ProductEndochitinase B1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3851776..3854467 -
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