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KJC3_012539-T1, KJC3_012539-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012539-T1
Unique NameKJC3_012539-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3864305..3865460+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012539-T1 ID=KJC3_012539-T1|Name=KJC3_012539-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1156bp|location=Sequence derived from alignment at ch8:3864305..3865460+ (Aspergillus niger KJC3)
CGGCCACCCAACGGTCTCGAGTGTCTGGTACAGTTTAAAATGTGCTATTC
TGGGCCGAAGTAATTGGTGGCTGCAACATGGCCCTCGCAGCCGTACACCG
TACATTTCGAACCTCTTCGTCCATGGAGTGGTAGCCTAAAGTACGTTATG
CTTAGACTCTACAGAGTTTTCAGCAGGGTTATCTAAAGTAAACTCTGGCT
CTACTATCAATTCGCTGGTTCTGGTTAGGCTACTATATGCTGATCCTAAA
CCAGATCCGTTAGTATATATATATAGAGCCTGGTAGGGCACCTTGTCTGC
CACATCTTCTATCACATGGATCGTCAAGTGGTAGATCAATCATGATTCAA
CAAGCATACCGCGTTATTGATCCCCAAAATGGCTCTCTACCATCATCTCT
AGAGAAAAAGGAAATCGAATCGGAAGTCGAGGTAAGTGCTGCAACTTAAG
TTACATCGCAGTCTGCTGGGAATGGTCAATTAGGTGCACGGAGATTAACG
GACGAGATAGATTCCTGTTCCAAAAGCGACGAAGCTGAGGATTTGGGTCA
ATCATGCATGGCATTGGATAGCAACACCCAAAGGCTTCTTCATTACCATT
TACAGCCTGAATGTGGTGGCCTGGGGAGGGATGCTTTTTCTGTTAATGTG
CAATGCAGCCCCTGCAATGTGCCACCCCACCTGTAACGACTTATACTCAT
CACGCCGAATCTGGATAGAGATCACATCGCAGATCCTCAACGGGTTGTTC
TGTGTTACAGGGTTCGGATTCGCACCATGGAGACTGAGGAATCTTTACTG
GTGGTTCTGCTGGCGGTTCGGCGCACGCCAGAAGAGCCGCTCTGGTATCG
CACATTTGGCTAGCATATATCAAGCGTGGTGTCGTCCCCCCGAGTCTGTA
TCAGGTATCTGCCGTGACAATGATAGAGAGTGCGGTCCGGCCACATCTCC
ATGGAAAATAGACCTGGTTGTATGGTGTGACATCTGGAATACCATATTTC
AGGCATGCTTGGCAGGTTGCATGTGGGGAATGGATAGGTTTAACCGGCCC
AGTTGGACCACCGGGTTATTCGTTGGCTTGGCTTGCGGTGTAGCTGGTAT
TTCCGGGTACATGGTCTTCCACGAGACAAGAAAGCTTCAGAGATAGTAAA
TATAAG
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Coding sequence (CDS) from alignment at ch8:3864305..3865460+

>KJC3_012539-T1 ID=KJC3_012539-T1|Name=KJC3_012539-T1|organism=Aspergillus niger KJC3|type=CDS|length=1452bp|location=Sequence derived from alignment at ch8:3864305..3865460+ (Aspergillus niger KJC3)
ATGATTCAACAAGCATACCGCGTTATTGATCCCCAAAATGGCTCTCTACC
ATCATCTCTAGAGAAAAAGGAAATCGAATCGGAAGTCGAGATTCCTGTTC
CAAAAGCGACGAAGCTGAGGATTTGGGTCAATCATGCATGGCATTGGATA
GCAACACCCAAAGGCTTCTTCATTACCATTTACAGCCTGAATGTGGTGGC
CTGGGGAGGGATGCTTTTTCTGTTAATGTGCAATGCAGCCCCTGCAATGT
GCCACCCCACCTGTAACGACTTATACTCATCACGCCGAATCTGGATAGAG
ATCACATCGCAGATCCTCAACGGGTTGTTCTGTGTTACAGGGTTCGGATT
CGCACCATGGAGACTGAGGAATCTTTACTGGTGGTTCTGCTGGCGGTTCG
GCGCACGCCAGAAGAGCCGCTCTGGTATCGCACATTTGGCTAGCATATAT
CAAGCGTGGTGTCGTCCCCCCGAGTCTGTATCAGGTATCTGCCGTGACAA
TGATAGAGAGTGCGGTCCGGCCACATCTCCATGGAAAATAGACCTGGTTG
TATGGTGTGACATCTGGAATACCATATTTCAGGCATGCTTGGCAGGTTGC
ATGTGGGGAATGGATAGGTTTAACCGGCCCAGTTGGACCACCGGGTTATT
CGTTGGCTTGGCTTGCGGTGTAGCTGGTATTTCCGGGTACATGGTCTTCC
ACGAGACAAGAAAGCTTCAGAGATAGATGATTCAACAAGCATACCGCGTT
ATTGATCCCCAAAATGGCTCTCTACCATCATCTCTAGAGAAAAAGGAAAT
CGAATCGGAAGTCGAGATTCCTGTTCCAAAAGCGACGAAGCTGAGGATTT
GGGTCAATCATGCATGGCATTGGATAGCAACACCCAAAGGCTTCTTCATT
ACCATTTACAGCCTGAATGTGGTGGCCTGGGGAGGGATGCTTTTTCTGTT
AATGTGCAATGCAGCCCCTGCAATGTGCCACCCCACCTGTAACGACTTAT
ACTCATCACGCCGAATCTGGATAGAGATCACATCGCAGATCCTCAACGGG
TTGTTCTGTGTTACAGGGTTCGGATTCGCACCATGGAGACTGAGGAATCT
TTACTGGTGGTTCTGCTGGCGGTTCGGCGCACGCCAGAAGAGCCGCTCTG
GTATCGCACATTTGGCTAGCATATATCAAGCGTGGTGTCGTCCCCCCGAG
TCTGTATCAGGTATCTGCCGTGACAATGATAGAGAGTGCGGTCCGGCCAC
ATCTCCATGGAAAATAGACCTGGTTGTATGGTGTGACATCTGGAATACCA
TATTTCAGGCATGCTTGGCAGGTTGCATGTGGGGAATGGATAGGTTTAAC
CGGCCCAGTTGGACCACCGGGTTATTCGTTGGCTTGGCTTGCGGTGTAGC
TGGTATTTCCGGGTACATGGTCTTCCACGAGACAAGAAAGCTTCAGAGAT
AG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012539KJC3_012539Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012539-T1KJC3_012539-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012539-T1.utr5p1KJC3_012539-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012539-T1.utr5p2KJC3_012539-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012539-T1.exon1KJC3_012539-T1.exon1Aspergillus niger KJC3exon
KJC3_012539-T1.exon2KJC3_012539-T1.exon2Aspergillus niger KJC3exon
KJC3_012539-T1.exon3KJC3_012539-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012539-T1.cdsKJC3_012539-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012539-T1.utr3p1KJC3_012539-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021369
DBxrefPFAM:PF11204
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3864305..3865460 +
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