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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3890463..3892263+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012547-T1 ID=KJC3_012547-T1|Name=KJC3_012547-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1801bp|location=Sequence derived from alignment at ch8:3890463..3892263+ (Aspergillus niger KJC3)
ATGAAGACTGCTGAATTCGAGTTCGATCTTGACTACAAGGTCATGCCCCA
TGACCCTGTTGAGCTTCGCGGCAAAACCCGTGATAGCGGAAAGATGATTG
TCTTAGATCGCGAGAGCTCTAAAATCGATCATGCTATCTTCTCTAGCATT
GGAGACTACTTCCGCCCCGGAGACCTCCTCGTGCTGAATGACAGCTACAT
GCTGTCAAACACGCTCTGGTTCGAGCACGGCAACAAGGAGTCCCTGCAAC
TGACCGTCTACGGCCACGAGCCAGACGGAACCACCATTGTTGAGCTCAAG
AATTCTGGGGTGAGACTGGCATAGATGAAGCTAAACTATAAGAATACATA
CATACTCCGGACTAATGAATCAAGGGTCACACATCAACTACTTATGCCCA
GTTCCATGACCCACTAACAGTAACAAAGGAAAACAATCATGACCCTGACT
TTTGTGTCTAGAGTCAAATTCAAAAATCCCATATATTCTCTAGGAACATC
TCATTTTCTTATGCCTGTCCTACTGATCATGCCATGCGTCCTAATATTGA
GTCATTGGCTTCAACTTTCACTTCAGTATCACAGTCGTATCCGATCCTCA
GCTCTGACTTCACAGTCACGCTGTTCTTGAGTACAACCATGAATATGTTG
TTAAGGTGGATGAGGTCGTGATAACTATACATCAAATATCAGCTTAGATC
TTAGTAGATCCATGTCACTGGTAAACATACTTATGCCGACACCAGAAGTA
AACAAAGATTAAAAAGCCCAGGCAGAAAGTACACAGTATTGGATTTGGGA
TATCCGGGACGAAAGAAGTTGACAGACTATTATCGACTGATGGAGTAGGA
GTAGACGAATTGGTAGGCATAATAGTAGGAGTATAAGCAGAACGGACCAT
GCTAGTAAAGGGGATGGATGAAGACAAGGGAAACGGAGACACGAGATCCA
TATGAGAGTCAGACGAAATATTGGATCTGTTATTAATGAATGAGTGAGTG
AAAGTACTTGATATAGGCGTGTGGTGGATCATAGTTAGTAGAATGTAGTT
GTGGACAGAAGTTTGAGGCGCGGCCGGTCAAGGAAAATTGTGGGAAGGCT
CCTTCCTCCTTTCCTAATACGAGCTGTGGAAGGTCCAGTTCACCCCAACT
GAGCTGCTCCTCCCAACTCTCGATCAATACGGAGCCCGGCTCGACGAAAA
CATCCATTTGAACCCTACTTACTGGAAAGAAAAGCCCGATGCTTACCGCT
CTGTGTATGCCAAAAAGCCCGGTTCTCTCGAGATCCCTTCGGCTGGACTG
CACTTCTCTCATGAGCTCCTCGCTGAAATCTCCGCCAAGGGTGTTGAGAT
CGCCTACATCACTCTGCATGTGGGGGCGACTGAGATTCTGTCCGTTCGGC
ACATCAGCGTCGAGGAGATTGAAAAGCACAAGGTACGATCGGAGTATTAC
GAGGTCAGCGAAAGGACTTCAGCGCAGCTGAATCGAGCAAGAAGCGAAGG
TCGTCGTGTCATTGCTGTTGGCACGACTGTTATGCGGATGCTGGAGACTA
TTACCTGTGAGACCGGATGTAAGGGTACCATCAAGCCCCAGCATGGATGG
ACTGATCTCTATATCTACCCGGGATTTGAGTTCAATGATGTGGATGTGCT
GCTTACCAATTTGCATCGTCCGCGGTCTAGCCATATTGTGCTTACGGCTG
CGTTCGCGGGGACCGACTTTGTTATGAGGAGCTACAAGGAAATTCAGGAG
AAGGGTGATTATGAGTTTGATATGTTCGGAGACTGTATGCTTATTACTTA
A back to topCoding sequence (CDS) from alignment at ch8:3890463..3892263+ >KJC3_012547-T1 ID=KJC3_012547-T1|Name=KJC3_012547-T1|organism=Aspergillus niger KJC3|type=CDS|length=1956bp|location=Sequence derived from alignment at ch8:3890463..3892263+ (Aspergillus niger KJC3)
ATGAAGACTGCTGAATTCGAGTTCGATCTTGACTACAAGGTCATGCCCCA
TGACCCTGTTGAGCTTCGCGGCAAAACCCGTGATAGCGGAAAGATGATTG
TCTTAGATCGCGAGAGCTCTAAAATCGATCATGCTATCTTCTCTAGCATT
GGAGACTACTTCCGCCCCGGAGACCTCCTCGTGCTGAATGACAGCTACAT
GCTGTCAAACACGCTCTGGTTCGAGCACGGCAACAAGGAGTCCCTGCAAC
TGACCGTCTACGGCCACGAGCCAGACGGAACCACCATTGTTGAGCTCAAG
AATTCTGGGGTCCAGTTCACCCCAACTGAGCTGCTCCTCCCAACTCTCGA
TCAATACGGAGCCCGGCTCGACGAAAACATCCATTTGAACCCTACTTACT
GGAAAGAAAAGCCCGATGCTTACCGCTCTGTGTATGCCAAAAAGCCCGGT
TCTCTCGAGATCCCTTCGGCTGGACTGCACTTCTCTCATGAGCTCCTCGC
TGAAATCTCCGCCAAGGGTGTTGAGATCGCCTACATCACTCTGCATGTGG
GGGCGACTGAGATTCTGTCCGTTCGGCACATCAGCGTCGAGGAGATTGAA
AAGCACAAGGTACGATCGGAGTATTACGAGGTCAGCGAAAGGACTTCAGC
GCAGCTGAATCGAGCAAGAAGCGAAGGTCGTCGTGTCATTGCTGTTGGCA
CGACTGTTATGCGGATGCTGGAGACTATTACCTGTGAGACCGGATGTAAG
GGTACCATCAAGCCCCAGCATGGATGGACTGATCTCTATATCTACCCGGG
ATTTGAGTTCAATGATGTGGATGTGCTGCTTACCAATTTGCATCGTCCGC
GGTCTAGCCATATTGTGCTTACGGCTGCGTTCGCGGGGACCGACTTTGTT
ATGAGGAGCTACAAGGAAATTCAGGAGAAGGGTGATTATGAGTTTGATAT
GTTCGGAGACTGTATGCTTATTACTTAAATGAAGACTGCTGAATTCGAGT
TCGATCTTGACTACAAGGTCATGCCCCATGACCCTGTTGAGCTTCGCGGC
AAAACCCGTGATAGCGGAAAGATGATTGTCTTAGATCGCGAGAGCTCTAA
AATCGATCATGCTATCTTCTCTAGCATTGGAGACTACTTCCGCCCCGGAG
ACCTCCTCGTGCTGAATGACAGCTACATGCTGTCAAACACGCTCTGGTTC
GAGCACGGCAACAAGGAGTCCCTGCAACTGACCGTCTACGGCCACGAGCC
AGACGGAACCACCATTGTTGAGCTCAAGAATTCTGGGGTCCAGTTCACCC
CAACTGAGCTGCTCCTCCCAACTCTCGATCAATACGGAGCCCGGCTCGAC
GAAAACATCCATTTGAACCCTACTTACTGGAAAGAAAAGCCCGATGCTTA
CCGCTCTGTGTATGCCAAAAAGCCCGGTTCTCTCGAGATCCCTTCGGCTG
GACTGCACTTCTCTCATGAGCTCCTCGCTGAAATCTCCGCCAAGGGTGTT
GAGATCGCCTACATCACTCTGCATGTGGGGGCGACTGAGATTCTGTCCGT
TCGGCACATCAGCGTCGAGGAGATTGAAAAGCACAAGGTACGATCGGAGT
ATTACGAGGTCAGCGAAAGGACTTCAGCGCAGCTGAATCGAGCAAGAAGC
GAAGGTCGTCGTGTCATTGCTGTTGGCACGACTGTTATGCGGATGCTGGA
GACTATTACCTGTGAGACCGGATGTAAGGGTACCATCAAGCCCCAGCATG
GATGGACTGATCTCTATATCTACCCGGGATTTGAGTTCAATGATGTGGAT
GTGCTGCTTACCAATTTGCATCGTCCGCGGTCTAGCCATATTGTGCTTAC
GGCTGCGTTCGCGGGGACCGACTTTGTTATGAGGAGCTACAAGGAAATTC
AGGAGAAGGGTGATTATGAGTTTGATATGTTCGGAGACTGTATGCTTATT
ACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016853 | isomerase activity |
| GO:0016740 | transferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008616 | queuosine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.8 |
| DBxref | InterPro:IPR036100 |
| DBxref | InterPro:IPR003699 |
| DBxref | InterPro:IPR042118 |
| DBxref | PFAM:PF02547 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3890463..3892263 + |
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