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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3899067..3901406+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012551-T1 ID=KJC3_012551-T1|Name=KJC3_012551-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2340bp|location=Sequence derived from alignment at ch8:3899067..3901406+ (Aspergillus niger KJC3)
GCAACAGTGGCTCCAGGTTGTCTTCGTCGACACTGGCTCGAATTAATCCC
GGTCTGCAGCGACTGGCCAAATTCATGGAGCAAGCGAAAGCATATGAGGC
ATCCTCATCGCACAGTCCCTCCTCGTCGTCTCTGGACTCCTTCTCGTCTA
CATCGATAACGCAACCGACACCAGCAGCAGCCAACACTTCCGCCCCTCCC
CACAATCCGCGATCGGAGGAAGATGCCCTCATCCTGGATAACGGAGTCCC
CCACTTTGTTTCCGGCAAACACTGGGCCTGGATGGCAGCAGAGGTGCGCT
TCACAGCATGCGGCTCGCGTGAATAACAGGAGTGAGAACACAGAAGAATG
CTAACATAGTCTCGCTGTTTCCTTTTCCCTCTTTATAGCTCCAAGACATC
CAATCAGTTCTCACGGAATCTCAAAAGTCCTCTTCTCCGGAAGGGACACT
TGACGATGTTATTTGGGAGGCCGATTCACCTGCCAGGGCATCATTTAGCA
ACATTAGCAACAACTTCTGGCCTGATACCCGGGAAGATTGTTACTTGCTG
TTGAATGTGTACCTGGCCAATGTCGACCCAATAGTTCGCATTATCCACCG
GCCAAGCTTGGCCCGTCGCTTTGACGCCTTCGTGCGCTCTCAATATCCTG
ACAGTCGAGATTACACACCGACCCAAGGGGGAGACAGCAACGGCGGTACG
AGCTGCGGTCCGACAAAGATTGACGCCTTCCAACCACTGGTCATGTCTAT
CTTCTACGCGGCTGTCAACAGTATAAAGGATACAGACGTAGCCACCATGT
TCGGTATGGACAAAGTCTCTCTTCTGAATCGGTATCGGATGGGAACAGAG
ATGCTTCTCAAGCACCAAAAGTTTATGACCTCGAGGATCTTTGAAGTTCT
GCAGGCATTTGTGATATTATTGGTAAGGAACCCATAAAGAAATTCAAAAA
CTAATCGCTATTCTAATCTTAATTCATGGCTATAGACTGCGCAATACAGA
GAAGATGACATGGGCAAAGTGTGGCCATTGACAGGCCTGGCCATTCGGAT
TGCAATGCTTCAGGGACTCCACAGGGACCCCCTAGCTCTACCACTCGGAA
CGATCGACGTCGTACAGGTGGAGCTGCGCCGTCGCCTGTGGGCTCAGATC
TGCTATTTGGATTTCCGGACTGCGGAAGATCACGGATTCGCGCCGTCGAT
CCACGCATCGGACTTCGATACGCGTCGGCCCGTCAGTCTGGACGATGTGG
ATCTGATTGAAGGCGTGGCCCCCTTGGCCGGGCTCTCTGATGCCTCTAAA
TTCACCGATATGACCATCTACCTTCTGCGCATCACAGCCGCCGGTTACTA
CGGGCACATCATCCAGATAACGCATGCATCACGCAAGCGTTTGCGTAACG
GCTTGAATGGTTCGGTTATTGACGAGTCCCAATTTTTGATGAAGCTACAA
GAACTGTTGCAGACCGCCACTGGGCTTGCAGGTGAGTTAGAGAGGGGCCT
CGACGAGCTGGTTCGGTACTGCGATAAGAGGGTGGTTATGCAATCGATGG
CTTTGGATCTTAGCCAGCACCTCAAGACCAAATTCTGGGTTATGTTCTGG
ATGCAGATCCCACGACAGAATCGCGAGAAAATCATAAGTCCTGCTATGAG
ACGAAAGTGAGCCTCCTCTCCTTCTGCCTCCACTTTCCTATAACCAGAAG
GTTTTACATGTCTGTCCACTTCGAGAAGAAGAGCATAGTAGGAGATTGGT
TCGAGAAGAATTAACAAACCTATTTTGATAGCATATTCGTCGACGCTGCG
ACCGCCGTAGAAACTTGGTGCACCATTTCTTCGAGCCCGGCCTGCGATCC
CTATCAATGGCACATAACCTCACACGCCGGCTTTAACCTCATTCTCTACG
TTCTCTCTGAGCTTCGCAGTCCCGAATTTCGGAAGCCTGGATGGGAGGAT
CTTCGCCAGCGTGGGCTTCAACTCGCCAATGCCATCTACGACCTGCGCGG
CCATCATACCACGGGCGCCTGGCCTGCAATCATGTGGCTGGTAAATCGTA
TTCGATTCCAGCAGGATCCGGCTGAAGATTCAAGGCCTCTGATGGCTGCT
GGCGCTGTTGTCGGCGGTAACGGTGGTACTGGGCCTGGTGGTCCGTCGGA
TACCCAGCCCTCGATTATGAGACCGGCTGGTCCTGCCGGTGCTGGGGGTG
TTGATGATGCTCCGCCAGTGGGCCCGGCAGGGTTGGAATTTGACACCGGA
GATCTCATGGGGCTGATCGATCTAGAAGACTTTGATTTCTCGGATTTCAT
TGTAATGGATGGGATGGGGTTGCCGGGGCTTTCGCGGTGA back to topCoding sequence (CDS) from alignment at ch8:3899067..3901406+ >KJC3_012551-T1 ID=KJC3_012551-T1|Name=KJC3_012551-T1|organism=Aspergillus niger KJC3|type=CDS|length=7932bp|location=Sequence derived from alignment at ch8:3899067..3901406+ (Aspergillus niger KJC3)
ATGGAGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAGTCCCTCCTC
GTCGTCTCTGGACTCCTTCTCGTCTACATCGATAACGCAACCGACACCAG
CAGCAGCCAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAGGAAGAT
GCCCTCATCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAAACACTG
GGCCTGGATGGCAGCAGAGCTCCAAGACATCCAATCAGTTCTCACGGAAT
CTCAAAAGTCCTCTTCTCCGGAAGGGACACTTGACGATGTTATTTGGGAG
GCCGATTCACCTGCCAGGGCATCATTTAGCAACATTAGCAACAACTTCTG
GCCTGATACCCGGGAAGATTGTTACTTGCTGTTGAATGTGTACCTGGCCA
ATGTCGACCCAATAGTTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGC
TTTGACGCCTTCGTGCGCTCTCAATATCCTGACAGTCGAGATTACACACC
GACCCAAGGGGGAGACAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGA
TTGACGCCTTCCAACCACTGGTCATGTCTATCTTCTACGCGGCTGTCAAC
AGTATAAAGGATACAGACGTAGCCACCATGTTCGGTATGGACAAAGTCTC
TCTTCTGAATCGGTATCGGATGGGAACAGAGATGCTTCTCAAGCACCAAA
AGTTTATGACCTCGAGGATCTTTGAAGTTCTGCAGGCATTTGTGATATTA
TTGACTGCGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCCATTGAC
AGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGGACCCCC
TAGCTCTACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTGCGCCGT
CGCCTGTGGGCTCAGATCTGCTATTTGGATTTCCGGACTGCGGAAGATCA
CGGATTCGCGCCGTCGATCCACGCATCGGACTTCGATACGCGTCGGCCCG
TCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTGGCCGGG
CTCTCTGATGCCTCTAAATTCACCGATATGACCATCTACCTTCTGCGCAT
CACAGCCGCCGGTTACTACGGGCACATCATCCAGATAACGCATGCATCAC
GCAAGCGTTTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAGTCCCAA
TTTTTGATGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCTTGCAGG
TGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATAAGAGGG
TGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAGACCAAA
TTCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAATCGCGAGAAAAT
CATAAGTCCTGCTATGAGACGAAACATATTCGTCGACGCTGCGACCGCCG
TAGAAACTTGGTGCACCATTTCTTCGAGCCCGGCCTGCGATCCCTATCAA
TGGCACATAACCTCACACGCCGGCTTTAACCTCATTCTCTACGTTCTCTC
TGAGCTTCGCAGTCCCGAATTTCGGAAGCCTGGATGGGAGGATCTTCGCC
AGCGTGGGCTTCAACTCGCCAATGCCATCTACGACCTGCGCGGCCATCAT
ACCACGGGCGCCTGGCCTGCAATCATGTGGCTGGTAAATCGTATTCGATT
CCAGCAGGATCCGGCTGAAGATTCAAGGCCTCTGATGGCTGCTGGCGCTG
TTGTCGGCGGTAACGGTGGTACTGGGCCTGGTGGTCCGTCGGATACCCAG
CCCTCGATTATGAGACCGGCTGGTCCTGCCGGTGCTGGGGGTGTTGATGA
TGCTCCGCCAGTGGGCCCGGCAGGGTTGGAATTTGACACCGGAGATCTCA
TGGGGCTGATCGATCTAGAAGACTTTGATTTCTCGGATTTCATTGTAATG
GATGGGATGGGGTTGCCGGGGCTTTCGCGGTGAATGGAGCAAGCGAAAGC
ATATGAGGCATCCTCATCGCACAGTCCCTCCTCGTCGTCTCTGGACTCCT
TCTCGTCTACATCGATAACGCAACCGACACCAGCAGCAGCCAACACTTCC
GCCCCTCCCCACAATCCGCGATCGGAGGAAGATGCCCTCATCCTGGATAA
CGGAGTCCCCCACTTTGTTTCCGGCAAACACTGGGCCTGGATGGCAGCAG
AGCTCCAAGACATCCAATCAGTTCTCACGGAATCTCAAAAGTCCTCTTCT
CCGGAAGGGACACTTGACGATGTTATTTGGGAGGCCGATTCACCTGCCAG
GGCATCATTTAGCAACATTAGCAACAACTTCTGGCCTGATACCCGGGAAG
ATTGTTACTTGCTGTTGAATGTGTACCTGGCCAATGTCGACCCAATAGTT
CGCATTATCCACCGGCCAAGCTTGGCCCGTCGCTTTGACGCCTTCGTGCG
CTCTCAATATCCTGACAGTCGAGATTACACACCGACCCAAGGGGGAGACA
GCAACGGCGGTACGAGCTGCGGTCCGACAAAGATTGACGCCTTCCAACCA
CTGGTCATGTCTATCTTCTACGCGGCTGTCAACAGTATAAAGGATACAGA
CGTAGCCACCATGTTCGGTATGGACAAAGTCTCTCTTCTGAATCGGTATC
GGATGGGAACAGAGATGCTTCTCAAGCACCAAAAGTTTATGACCTCGAGG
ATCTTTGAAGTTCTGCAGGCATTTGTGATATTATTGACTGCGCAATACAG
AGAAGATGACATGGGCAAAGTGTGGCCATTGACAGGCCTGGCCATTCGGA
TTGCAATGCTTCAGGGACTCCACAGGGACCCCCTAGCTCTACCACTCGGA
ACGATCGACGTCGTACAGGTGGAGCTGCGCCGTCGCCTGTGGGCTCAGAT
CTGCTATTTGGATTTCCGGACTGCGGAAGATCACGGATTCGCGCCGTCGA
TCCACGCATCGGACTTCGATACGCGTCGGCCCGTCAGTCTGGACGATGTG
GATCTGATTGAAGGCGTGGCCCCCTTGGCCGGGCTCTCTGATGCCTCTAA
ATTCACCGATATGACCATCTACCTTCTGCGCATCACAGCCGCCGGTTACT
ACGGGCACATCATCCAGATAACGCATGCATCACGCAAGCGTTTGCGTAAC
GGCTTGAATGGTTCGGTTATTGACGAGTCCCAATTTTTGATGAAGCTACA
AGAACTGTTGCAGACCGCCACTGGGCTTGCAGGTGAGTTAGAGAGGGGCC
TCGACGAGCTGGTTCGGTACTGCGATAAGAGGGTGGTTATGCAATCGATG
GCTTTGGATCTTAGCCAGCACCTCAAGACCAAATTCTGGGTTATGTTCTG
GATGCAGATCCCACGACAGAATCGCGAGAAAATCATAAGTCCTGCTATGA
GACGAAACATATTCGTCGACGCTGCGACCGCCGTAGAAACTTGGTGCACC
ATTTCTTCGAGCCCGGCCTGCGATCCCTATCAATGGCACATAACCTCACA
CGCCGGCTTTAACCTCATTCTCTACGTTCTCTCTGAGCTTCGCAGTCCCG
AATTTCGGAAGCCTGGATGGGAGGATCTTCGCCAGCGTGGGCTTCAACTC
GCCAATGCCATCTACGACCTGCGCGGCCATCATACCACGGGCGCCTGGCC
TGCAATCATGTGGCTGGTAAATCGTATTCGATTCCAGCAGGATCCGGCTG
AAGATTCAAGGCCTCTGATGGCTGCTGGCGCTGTTGTCGGCGGTAACGGT
GGTACTGGGCCTGGTGGTCCGTCGGATACCCAGCCCTCGATTATGAGACC
GGCTGGTCCTGCCGGTGCTGGGGGTGTTGATGATGCTCCGCCAGTGGGCC
CGGCAGGGTTGGAATTTGACACCGGAGATCTCATGGGGCTGATCGATCTA
GAAGACTTTGATTTCTCGGATTTCATTGTAATGGATGGGATGGGGTTGCC
GGGGCTTTCGCGGTGAATGGAGCAAGCGAAAGCATATGAGGCATCCTCAT
CGCACAGTCCCTCCTCGTCGTCTCTGGACTCCTTCTCGTCTACATCGATA
ACGCAACCGACACCAGCAGCAGCCAACACTTCCGCCCCTCCCCACAATCC
GCGATCGGAGGAAGATGCCCTCATCCTGGATAACGGAGTCCCCCACTTTG
TTTCCGGCAAACACTGGGCCTGGATGGCAGCAGAGCTCCAAGACATCCAA
TCAGTTCTCACGGAATCTCAAAAGTCCTCTTCTCCGGAAGGGACACTTGA
CGATGTTATTTGGGAGGCCGATTCACCTGCCAGGGCATCATTTAGCAACA
TTAGCAACAACTTCTGGCCTGATACCCGGGAAGATTGTTACTTGCTGTTG
AATGTGTACCTGGCCAATGTCGACCCAATAGTTCGCATTATCCACCGGCC
AAGCTTGGCCCGTCGCTTTGACGCCTTCGTGCGCTCTCAATATCCTGACA
GTCGAGATTACACACCGACCCAAGGGGGAGACAGCAACGGCGGTACGAGC
TGCGGTCCGACAAAGATTGACGCCTTCCAACCACTGGTCATGTCTATCTT
CTACGCGGCTGTCAACAGTATAAAGGATACAGACGTAGCCACCATGTTCG
GTATGGACAAAGTCTCTCTTCTGAATCGGTATCGGATGGGAACAGAGATG
CTTCTCAAGCACCAAAAGTTTATGACCTCGAGGATCTTTGAAGTTCTGCA
GGCATTTGTGATATTATTGACTGCGCAATACAGAGAAGATGACATGGGCA
AAGTGTGGCCATTGACAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGA
CTCCACAGGGACCCCCTAGCTCTACCACTCGGAACGATCGACGTCGTACA
GGTGGAGCTGCGCCGTCGCCTGTGGGCTCAGATCTGCTATTTGGATTTCC
GGACTGCGGAAGATCACGGATTCGCGCCGTCGATCCACGCATCGGACTTC
GATACGCGTCGGCCCGTCAGTCTGGACGATGTGGATCTGATTGAAGGCGT
GGCCCCCTTGGCCGGGCTCTCTGATGCCTCTAAATTCACCGATATGACCA
TCTACCTTCTGCGCATCACAGCCGCCGGTTACTACGGGCACATCATCCAG
ATAACGCATGCATCACGCAAGCGTTTGCGTAACGGCTTGAATGGTTCGGT
TATTGACGAGTCCCAATTTTTGATGAAGCTACAAGAACTGTTGCAGACCG
CCACTGGGCTTGCAGGTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGG
TACTGCGATAAGAGGGTGGTTATGCAATCGATGGCTTTGGATCTTAGCCA
GCACCTCAAGACCAAATTCTGGGTTATGTTCTGGATGCAGATCCCACGAC
AGAATCGCGAGAAAATCATAAGTCCTGCTATGAGACGAAACATATTCGTC
GACGCTGCGACCGCCGTAGAAACTTGGTGCACCATTTCTTCGAGCCCGGC
CTGCGATCCCTATCAATGGCACATAACCTCACACGCCGGCTTTAACCTCA
TTCTCTACGTTCTCTCTGAGCTTCGCAGTCCCGAATTTCGGAAGCCTGGA
TGGGAGGATCTTCGCCAGCGTGGGCTTCAACTCGCCAATGCCATCTACGA
CCTGCGCGGCCATCATACCACGGGCGCCTGGCCTGCAATCATGTGGCTGG
TAAATCGTATTCGATTCCAGCAGGATCCGGCTGAAGATTCAAGGCCTCTG
ATGGCTGCTGGCGCTGTTGTCGGCGGTAACGGTGGTACTGGGCCTGGTGG
TCCGTCGGATACCCAGCCCTCGATTATGAGACCGGCTGGTCCTGCCGGTG
CTGGGGGTGTTGATGATGCTCCGCCAGTGGGCCCGGCAGGGTTGGAATTT
GACACCGGAGATCTCATGGGGCTGATCGATCTAGAAGACTTTGATTTCTC
GGATTTCATTGTAATGGATGGGATGGGGTTGCCGGGGCTTTCGCGGTGAA
TGGAGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAGTCCCTCCTCG
TCGTCTCTGGACTCCTTCTCGTCTACATCGATAACGCAACCGACACCAGC
AGCAGCCAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAGGAAGATG
CCCTCATCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAAACACTGG
GCCTGGATGGCAGCAGAGCTCCAAGACATCCAATCAGTTCTCACGGAATC
TCAAAAGTCCTCTTCTCCGGAAGGGACACTTGACGATGTTATTTGGGAGG
CCGATTCACCTGCCAGGGCATCATTTAGCAACATTAGCAACAACTTCTGG
CCTGATACCCGGGAAGATTGTTACTTGCTGTTGAATGTGTACCTGGCCAA
TGTCGACCCAATAGTTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGCT
TTGACGCCTTCGTGCGCTCTCAATATCCTGACAGTCGAGATTACACACCG
ACCCAAGGGGGAGACAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGAT
TGACGCCTTCCAACCACTGGTCATGTCTATCTTCTACGCGGCTGTCAACA
GTATAAAGGATACAGACGTAGCCACCATGTTCGGTATGGACAAAGTCTCT
CTTCTGAATCGGTATCGGATGGGAACAGAGATGCTTCTCAAGCACCAAAA
GTTTATGACCTCGAGGATCTTTGAAGTTCTGCAGGCATTTGTGATATTAT
TGACTGCGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCCATTGACA
GGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGGACCCCCT
AGCTCTACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTGCGCCGTC
GCCTGTGGGCTCAGATCTGCTATTTGGATTTCCGGACTGCGGAAGATCAC
GGATTCGCGCCGTCGATCCACGCATCGGACTTCGATACGCGTCGGCCCGT
CAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTGGCCGGGC
TCTCTGATGCCTCTAAATTCACCGATATGACCATCTACCTTCTGCGCATC
ACAGCCGCCGGTTACTACGGGCACATCATCCAGATAACGCATGCATCACG
CAAGCGTTTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAGTCCCAAT
TTTTGATGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCTTGCAGGT
GAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATAAGAGGGT
GGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAGACCAAAT
TCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAATCGCGAGAAAATC
ATAAGTCCTGCTATGAGACGAAACATATTCGTCGACGCTGCGACCGCCGT
AGAAACTTGGTGCACCATTTCTTCGAGCCCGGCCTGCGATCCCTATCAAT
GGCACATAACCTCACACGCCGGCTTTAACCTCATTCTCTACGTTCTCTCT
GAGCTTCGCAGTCCCGAATTTCGGAAGCCTGGATGGGAGGATCTTCGCCA
GCGTGGGCTTCAACTCGCCAATGCCATCTACGACCTGCGCGGCCATCATA
CCACGGGCGCCTGGCCTGCAATCATGTGGCTGGTAAATCGTATTCGATTC
CAGCAGGATCCGGCTGAAGATTCAAGGCCTCTGATGGCTGCTGGCGCTGT
TGTCGGCGGTAACGGTGGTACTGGGCCTGGTGGTCCGTCGGATACCCAGC
CCTCGATTATGAGACCGGCTGGTCCTGCCGGTGCTGGGGGTGTTGATGAT
GCTCCGCCAGTGGGCCCGGCAGGGTTGGAATTTGACACCGGAGATCTCAT
GGGGCTGATCGATCTAGAAGACTTTGATTTCTCGGATTTCATTGTAATGG
ATGGGATGGGGTTGCCGGGGCTTTCGCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012551-T1.utr5p1 | KJC3_012551-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.8 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3899067..3901406 + |
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