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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3908289..3909303+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012555-T1 ID=KJC3_012555-T1|Name=KJC3_012555-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1015bp|location=Sequence derived from alignment at ch8:3908289..3909303+ (Aspergillus niger KJC3)
GCCGTCCATGATCGTGCAGGTCACACACTTCCGTTCTATTTCAAATTCCC
TCCCTACCAAATTTTCCCTACTCTCAATGGCTACGTTCAAACAGCTGGTT
CGATTCGCCGTCGGTGATCAGACACACTATGGTGAGCTGATCAACACCGA
CGGCAATAAGTACACGGTGCAGCAGTTCGATGGTACTCCCTTCGACAAGT
TGCTTTTGACAGACAAAACATACACCGTGACTGATGTATGTTATACCAGC
CTTGCAACTACTCTCACTCAAATCTCACAATGAACGATCAATTAGCTTCT
ACCGCCCGTCCCGAATATTCCCCTGGTTATCTGTATCGGTCTCAACTACA
AACAACACGCGAAGGAGGCCAGTGTAAGCCTCTCCCCACTCAACGCACAC
AAACCCATTTCCCTGACTAACGATGTTGTATAGTTGGATGTACCGACCTA
CCCTCCAGTCTTCACCAAACCCGCCGATGCCCTCGCGGGACCCTTTGAAA
CCATTCCCATCCACCGTGACGCCCAATCCCACCTCGACTACGAGGGCGAA
TTAACTGTCGTTATCGGCAAAGATGCAAAGAATGTCTCTGCAGAGGACGC
TCTCGACTATGTTCTCGGATACACCGCGGGGAATGATCTCTCGGCGCGCA
ACTTCCAGATGCCGGAGGCGTCGGGGGGTCAATTCTGCTACGCCAAGTCA
TTCGATAAATTTGCTCCCGTTGGACATGTCCTTGTCAGCGCGCAGGAGGT
GCAAGACCCGCAGCAGCTGAGCCTGGTCACCAAGGTGAATGGAGTGGTCA
AACAGACCACCAATACCAGTGATATGATTTGGGGTGTGCGCGACATCGTT
AGTCATCTGTCCCGCGGAATGACCCTGAGGAAGGGCACCCTCATCATGAC
TGGCACCCCGTCGGGAGTGGTCTTTTTCCGAAAGGAATTCTTGCAGGACG
GAGATGTGGTGGAGGTTGAGGTGGGAGGTGTGGCGAGTGTGAAGAATAAG
ATGAAATATCTGTAG back to topCoding sequence (CDS) from alignment at ch8:3908289..3909303+ >KJC3_012555-T1 ID=KJC3_012555-T1|Name=KJC3_012555-T1|organism=Aspergillus niger KJC3|type=CDS|length=2664bp|location=Sequence derived from alignment at ch8:3908289..3909303+ (Aspergillus niger KJC3)
ATGATCGTGCAGGTCACACACTTCCGTTCTATTTCAAATTCCCTCCCTAC
CAAATTTTCCCTACTCTCAATGGCTACGTTCAAACAGCTGGTTCGATTCG
CCGTCGGTGATCAGACACACTATGGTGAGCTGATCAACACCGACGGCAAT
AAGTACACGGTGCAGCAGTTCGATGGTACTCCCTTCGACAAGTTGCTTTT
GACAGACAAAACATACACCGTGACTGATCTTCTACCGCCCGTCCCGAATA
TTCCCCTGGTTATCTGTATCGGTCTCAACTACAAACAACACGCGAAGGAG
GCCAGTTTGGATGTACCGACCTACCCTCCAGTCTTCACCAAACCCGCCGA
TGCCCTCGCGGGACCCTTTGAAACCATTCCCATCCACCGTGACGCCCAAT
CCCACCTCGACTACGAGGGCGAATTAACTGTCGTTATCGGCAAAGATGCA
AAGAATGTCTCTGCAGAGGACGCTCTCGACTATGTTCTCGGATACACCGC
GGGGAATGATCTCTCGGCGCGCAACTTCCAGATGCCGGAGGCGTCGGGGG
GTCAATTCTGCTACGCCAAGTCATTCGATAAATTTGCTCCCGTTGGACAT
GTCCTTGTCAGCGCGCAGGAGGTGCAAGACCCGCAGCAGCTGAGCCTGGT
CACCAAGGTGAATGGAGTGGTCAAACAGACCACCAATACCAGTGATATGA
TTTGGGGTGTGCGCGACATCGTTAGTCATCTGTCCCGCGGAATGACCCTG
AGGAAGGGCACCCTCATCATGACTGGCACCCCGTCGGGAGTGGTCTTTTT
CCGAAAGGAATTCTTGCAGGACGGAGATGTGGTGGAGGTTGAGGTGGGAG
GTGTGGCGAGTGTGAAGAATAAGATGAAATATCTGTAGATGATCGTGCAG
GTCACACACTTCCGTTCTATTTCAAATTCCCTCCCTACCAAATTTTCCCT
ACTCTCAATGGCTACGTTCAAACAGCTGGTTCGATTCGCCGTCGGTGATC
AGACACACTATGGTGAGCTGATCAACACCGACGGCAATAAGTACACGGTG
CAGCAGTTCGATGGTACTCCCTTCGACAAGTTGCTTTTGACAGACAAAAC
ATACACCGTGACTGATCTTCTACCGCCCGTCCCGAATATTCCCCTGGTTA
TCTGTATCGGTCTCAACTACAAACAACACGCGAAGGAGGCCAGTTTGGAT
GTACCGACCTACCCTCCAGTCTTCACCAAACCCGCCGATGCCCTCGCGGG
ACCCTTTGAAACCATTCCCATCCACCGTGACGCCCAATCCCACCTCGACT
ACGAGGGCGAATTAACTGTCGTTATCGGCAAAGATGCAAAGAATGTCTCT
GCAGAGGACGCTCTCGACTATGTTCTCGGATACACCGCGGGGAATGATCT
CTCGGCGCGCAACTTCCAGATGCCGGAGGCGTCGGGGGGTCAATTCTGCT
ACGCCAAGTCATTCGATAAATTTGCTCCCGTTGGACATGTCCTTGTCAGC
GCGCAGGAGGTGCAAGACCCGCAGCAGCTGAGCCTGGTCACCAAGGTGAA
TGGAGTGGTCAAACAGACCACCAATACCAGTGATATGATTTGGGGTGTGC
GCGACATCGTTAGTCATCTGTCCCGCGGAATGACCCTGAGGAAGGGCACC
CTCATCATGACTGGCACCCCGTCGGGAGTGGTCTTTTTCCGAAAGGAATT
CTTGCAGGACGGAGATGTGGTGGAGGTTGAGGTGGGAGGTGTGGCGAGTG
TGAAGAATAAGATGAAATATCTGTAGATGATCGTGCAGGTCACACACTTC
CGTTCTATTTCAAATTCCCTCCCTACCAAATTTTCCCTACTCTCAATGGC
TACGTTCAAACAGCTGGTTCGATTCGCCGTCGGTGATCAGACACACTATG
GTGAGCTGATCAACACCGACGGCAATAAGTACACGGTGCAGCAGTTCGAT
GGTACTCCCTTCGACAAGTTGCTTTTGACAGACAAAACATACACCGTGAC
TGATCTTCTACCGCCCGTCCCGAATATTCCCCTGGTTATCTGTATCGGTC
TCAACTACAAACAACACGCGAAGGAGGCCAGTTTGGATGTACCGACCTAC
CCTCCAGTCTTCACCAAACCCGCCGATGCCCTCGCGGGACCCTTTGAAAC
CATTCCCATCCACCGTGACGCCCAATCCCACCTCGACTACGAGGGCGAAT
TAACTGTCGTTATCGGCAAAGATGCAAAGAATGTCTCTGCAGAGGACGCT
CTCGACTATGTTCTCGGATACACCGCGGGGAATGATCTCTCGGCGCGCAA
CTTCCAGATGCCGGAGGCGTCGGGGGGTCAATTCTGCTACGCCAAGTCAT
TCGATAAATTTGCTCCCGTTGGACATGTCCTTGTCAGCGCGCAGGAGGTG
CAAGACCCGCAGCAGCTGAGCCTGGTCACCAAGGTGAATGGAGTGGTCAA
ACAGACCACCAATACCAGTGATATGATTTGGGGTGTGCGCGACATCGTTA
GTCATCTGTCCCGCGGAATGACCCTGAGGAAGGGCACCCTCATCATGACT
GGCACCCCGTCGGGAGTGGTCTTTTTCCGAAAGGAATTCTTGCAGGACGG
AGATGTGGTGGAGGTTGAGGTGGGAGGTGTGGCGAGTGTGAAGAATAAGA
TGAAATATCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012555-T1.utr5p1 | KJC3_012555-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.8 |
| DBxref | InterPro:IPR036663 |
| DBxref | InterPro:IPR011234 |
| DBxref | PFAM:PF01557 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3908289..3909303 + |
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