|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3914504..3916198+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012558-T1 ID=KJC3_012558-T1|Name=KJC3_012558-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1695bp|location=Sequence derived from alignment at ch8:3914504..3916198+ (Aspergillus niger KJC3) ATGGTGCACATTCCAACATTCAAGATCGAGGAATGTGAACCAGAAATGCT
ACTGGCTATGTGTGCTCTCGGTGCAGAATCTCGGCATGAGAATCGCAAAG
CAGCATTGTTATTTCATGCAGCGAAGGACATACTGCATGCACGGGGTAAA
GAGTGGGCAGATATTGAAATTGCTTCAGGTGCCTCAGAAGGAAGCTCAAC
ATTTCCAAATCAGCAAGCCTTCAATTCCACCGACAAAATAATGCAGTGTC
GTAGATATATGCGTGAAGCCCGGTGCGCATTTCTCCTCGTTGCGTTTGCG
ACCTGGCAACGCGAGGAAAGCATACACCGCGAGGCTTTCAATCTCCAGAG
CTTCCTGGCTAGATGCGTTAGAGAGTCACAATTGAAAGAGGCCGATGATT
CTTCAGTTACCAACACTGACAGCTGGCATTTGTGGATTCAGCAAGAAACC
GACAGGAGGGTAAAACTCTTCTCTTTCTCTTTATTGACTCTTCAGTCTAT
AGCATTTGGTACACCACCAGCCATCCTGGCCGATGAAATCAACGTTCGTC
TCCCATGTAGCTGCCTCGAATGGATTGCTCCGAACGAGCAGAAGTGGAAA
CATGTTCGAAGACCTGGCCATAAAGAGCAGATGTTGTTCCAAGATGCTCT
ATGTCACGTTATGAAGAATACACGAGATACTAATTTGAAAGGCACCCACC
CGGTTCCTTCACCGTTGTCGAACTACATCCTATTACACGCCATTATCCAG
CGGATCTTGCTCGCATATCACACCCTTGGCCCATATAATGATGTGAATAA
CACCGTACTAAATGGGCAAAAGGAAGTCATGCGGTACGCGATCTCCCATC
TGTTCAACAGCTACATTCCCCTAACCACTAACGTGGCTACCTTTCTCCTA
GCAACTCTCTTTATGCATGGACCTCTCTTTGGCAACAAGCACCTGAATCG
AGTCTGGACCCTCGAAATCCCAATGGCCCTGTGACATATACTTCAACTGC
CCTGCTGGGTGTTGCATATATTCGACTTGGCCTCGATTTAGGCTCATATA
GAATTCTTCAGTCTCGTGATGCTAGAGAAATAGCAAACCGACTGTTACAA
ATACCTCGTTTGCCACCTGGCCCTCACCTTCTCCCAGCAATTCTACATGC
GACGCATGCTCTCAGCATCCCTGTCAAATTAGGGGTAAATTATGTGGCTC
GAAGCCATGCGTTCGTCTGGAGCGTTCAACACTCTCTTTGTGGACTGGAG
TTCGCGATCTTTCTCAGCAAATGGCTGTTTTGTATTGCCGACAACCAGAC
CAGAAGGCCACTAGATGGTATGTTATTTTATCCCAAGGGGTACCCGGTCC
TTGCTGAGTTCAAACCCTTGAAGAGGATTGATATTTTTCTAATACGTATA
ACCAGAACATGAAGCGCGGCTCGTAAATTGGATCAGCGATATTGTGGAAG
AAGGACGAACATCAGCAGACGAGGATCTGTGGTCTCGGCCTTCAGATCTG
TCCGATTGTTCTTATCTAGGATTTGCCGTCGTAAAGCTATGGGCCCGTCT
GATCAAGGGAAATGGCCAATGGTCATTATTCGAGGTTGTTGGTGATGGAC
TTGACCTCTATGCCAACACTTGTGAGCAGAACCTTATCAATTCTCAGACA
GCTATGTCCGAGTCACGTTAAATGTTATTGAGATTCTATATACGC back to topCoding sequence (CDS) from alignment at ch8:3914504..3916198+ >KJC3_012558-T1 ID=KJC3_012558-T1|Name=KJC3_012558-T1|organism=Aspergillus niger KJC3|type=CDS|length=4545bp|location=Sequence derived from alignment at ch8:3914504..3916198+ (Aspergillus niger KJC3) ATGGTGCACATTCCAACATTCAAGATCGAGGAATGTGAACCAGAAATGCT ACTGGCTATGTGTGCTCTCGGTGCAGAATCTCGGCATGAGAATCGCAAAG CAGCATTGTTATTTCATGCAGCGAAGGACATACTGCATGCACGGGGTAAA GAGTGGGCAGATATTGAAATTGCTTCAGGTGCCTCAGAAGGAAGCTCAAC ATTTCCAAATCAGCAAGCCTTCAATTCCACCGACAAAATAATGCAGTGTC GTAGATATATGCGTGAAGCCCGGTGCGCATTTCTCCTCGTTGCGTTTGCG ACCTGGCAACGCGAGGAAAGCATACACCGCGAGGCTTTCAATCTCCAGAG CTTCCTGGCTAGATGCGTTAGAGAGTCACAATTGAAAGAGGCCGATGATT CTTCAGTTACCAACACTGACAGCTGGCATTTGTGGATTCAGCAAGAAACC GACAGGAGGGTAAAACTCTTCTCTTTCTCTTTATTGACTCTTCAGTCTAT AGCATTTGGTACACCACCAGCCATCCTGGCCGATGAAATCAACGTTCGTC TCCCATGTAGCTGCCTCGAATGGATTGCTCCGAACGAGCAGAAGTGGAAA CATGTTCGAAGACCTGGCCATAAAGAGCAGATGTTGTTCCAAGATGCTCT ATGTCACGTTATGAAGAATACACGAGATACTAATTTGAAAGGCACCCACC CGGTTCCTTCACCGTTGTCGAACTACATCCTATTACACGCCATTATCCAG CGGATCTTGCTCGCATATCACACCCTTGGCCCATATAATGATGTGAATAA CACCGTACTAAATGGGCAAAAGGAAGTCATGCGCAACTCTCTTTATGCAT GGACCTCTCTTTGGCAACAAGCACCTGAATCGAGTCTGGACCCTCGAAAT CCCAATGGCCCTGTGACATATACTTCAACTGCCCTGCTGGGTGTTGCATA TATTCGACTTGGCCTCGATTTAGGCTCATATAGAATTCTTCAGTCTCGTG ATGCTAGAGAAATAGCAAACCGACTGTTACAAATACCTCGTTTGCCACCT GGCCCTCACCTTCTCCCAGCAATTCTACATGCGACGCATGCTCTCAGCAT CCCTGTCAAATTAGGGGTAAATTATGTGGCTCGAAGCCATGCGTTCGTCT GGAGCGTTCAACACTCTCTTTGTGGACTGGAGTTCGCGATCTTTCTCAGC AAATGGCTGTTTTGTATTGCCGACAACCAGACCAGAAGGCCACTAGATGA ACATGAAGCGCGGCTCGTAAATTGGATCAGCGATATTGTGGAAGAAGGAC GAACATCAGCAGACGAGGATCTGTGGTCTCGGCCTTCAGATCTGTCCGAT TGTTCTTATCTAGGATTTGCCGTCGTAAAGCTATGGGCCCGTCTGATCAA GGGAAATGGCCAATGGTCATTATTCGAGGTTGTTGGTGATGGACTTGACC TCTATGCCAACACTTGTGAGCAGAACCTTATCAATTCTCAGACAGCTATG TCCGAGTCACGTTAAATGGTGCACATTCCAACATTCAAGATCGAGGAATG TGAACCAGAAATGCTACTGGCTATGTGTGCTCTCGGTGCAGAATCTCGGC ATGAGAATCGCAAAGCAGCATTGTTATTTCATGCAGCGAAGGACATACTG CATGCACGGGGTAAAGAGTGGGCAGATATTGAAATTGCTTCAGGTGCCTC AGAAGGAAGCTCAACATTTCCAAATCAGCAAGCCTTCAATTCCACCGACA AAATAATGCAGTGTCGTAGATATATGCGTGAAGCCCGGTGCGCATTTCTC CTCGTTGCGTTTGCGACCTGGCAACGCGAGGAAAGCATACACCGCGAGGC TTTCAATCTCCAGAGCTTCCTGGCTAGATGCGTTAGAGAGTCACAATTGA AAGAGGCCGATGATTCTTCAGTTACCAACACTGACAGCTGGCATTTGTGG ATTCAGCAAGAAACCGACAGGAGGGTAAAACTCTTCTCTTTCTCTTTATT GACTCTTCAGTCTATAGCATTTGGTACACCACCAGCCATCCTGGCCGATG AAATCAACGTTCGTCTCCCATGTAGCTGCCTCGAATGGATTGCTCCGAAC GAGCAGAAGTGGAAACATGTTCGAAGACCTGGCCATAAAGAGCAGATGTT GTTCCAAGATGCTCTATGTCACGTTATGAAGAATACACGAGATACTAATT TGAAAGGCACCCACCCGGTTCCTTCACCGTTGTCGAACTACATCCTATTA CACGCCATTATCCAGCGGATCTTGCTCGCATATCACACCCTTGGCCCATA TAATGATGTGAATAACACCGTACTAAATGGGCAAAAGGAAGTCATGCGCA ACTCTCTTTATGCATGGACCTCTCTTTGGCAACAAGCACCTGAATCGAGT CTGGACCCTCGAAATCCCAATGGCCCTGTGACATATACTTCAACTGCCCT GCTGGGTGTTGCATATATTCGACTTGGCCTCGATTTAGGCTCATATAGAA TTCTTCAGTCTCGTGATGCTAGAGAAATAGCAAACCGACTGTTACAAATA CCTCGTTTGCCACCTGGCCCTCACCTTCTCCCAGCAATTCTACATGCGAC GCATGCTCTCAGCATCCCTGTCAAATTAGGGGTAAATTATGTGGCTCGAA GCCATGCGTTCGTCTGGAGCGTTCAACACTCTCTTTGTGGACTGGAGTTC GCGATCTTTCTCAGCAAATGGCTGTTTTGTATTGCCGACAACCAGACCAG AAGGCCACTAGATGAACATGAAGCGCGGCTCGTAAATTGGATCAGCGATA TTGTGGAAGAAGGACGAACATCAGCAGACGAGGATCTGTGGTCTCGGCCT TCAGATCTGTCCGATTGTTCTTATCTAGGATTTGCCGTCGTAAAGCTATG GGCCCGTCTGATCAAGGGAAATGGCCAATGGTCATTATTCGAGGTTGTTG GTGATGGACTTGACCTCTATGCCAACACTTGTGAGCAGAACCTTATCAAT TCTCAGACAGCTATGTCCGAGTCACGTTAAATGGTGCACATTCCAACATT CAAGATCGAGGAATGTGAACCAGAAATGCTACTGGCTATGTGTGCTCTCG GTGCAGAATCTCGGCATGAGAATCGCAAAGCAGCATTGTTATTTCATGCA GCGAAGGACATACTGCATGCACGGGGTAAAGAGTGGGCAGATATTGAAAT TGCTTCAGGTGCCTCAGAAGGAAGCTCAACATTTCCAAATCAGCAAGCCT TCAATTCCACCGACAAAATAATGCAGTGTCGTAGATATATGCGTGAAGCC CGGTGCGCATTTCTCCTCGTTGCGTTTGCGACCTGGCAACGCGAGGAAAG CATACACCGCGAGGCTTTCAATCTCCAGAGCTTCCTGGCTAGATGCGTTA GAGAGTCACAATTGAAAGAGGCCGATGATTCTTCAGTTACCAACACTGAC AGCTGGCATTTGTGGATTCAGCAAGAAACCGACAGGAGGGTAAAACTCTT CTCTTTCTCTTTATTGACTCTTCAGTCTATAGCATTTGGTACACCACCAG CCATCCTGGCCGATGAAATCAACGTTCGTCTCCCATGTAGCTGCCTCGAA TGGATTGCTCCGAACGAGCAGAAGTGGAAACATGTTCGAAGACCTGGCCA TAAAGAGCAGATGTTGTTCCAAGATGCTCTATGTCACGTTATGAAGAATA CACGAGATACTAATTTGAAAGGCACCCACCCGGTTCCTTCACCGTTGTCG AACTACATCCTATTACACGCCATTATCCAGCGGATCTTGCTCGCATATCA CACCCTTGGCCCATATAATGATGTGAATAACACCGTACTAAATGGGCAAA AGGAAGTCATGCGCAACTCTCTTTATGCATGGACCTCTCTTTGGCAACAA GCACCTGAATCGAGTCTGGACCCTCGAAATCCCAATGGCCCTGTGACATA TACTTCAACTGCCCTGCTGGGTGTTGCATATATTCGACTTGGCCTCGATT TAGGCTCATATAGAATTCTTCAGTCTCGTGATGCTAGAGAAATAGCAAAC CGACTGTTACAAATACCTCGTTTGCCACCTGGCCCTCACCTTCTCCCAGC AATTCTACATGCGACGCATGCTCTCAGCATCCCTGTCAAATTAGGGGTAA ATTATGTGGCTCGAAGCCATGCGTTCGTCTGGAGCGTTCAACACTCTCTT TGTGGACTGGAGTTCGCGATCTTTCTCAGCAAATGGCTGTTTTGTATTGC CGACAACCAGACCAGAAGGCCACTAGATGAACATGAAGCGCGGCTCGTAA ATTGGATCAGCGATATTGTGGAAGAAGGACGAACATCAGCAGACGAGGAT CTGTGGTCTCGGCCTTCAGATCTGTCCGATTGTTCTTATCTAGGATTTGC CGTCGTAAAGCTATGGGCCCGTCTGATCAAGGGAAATGGCCAATGGTCAT TATTCGAGGTTGTTGGTGATGGACTTGACCTCTATGCCAACACTTGTGAG CAGAACCTTATCAATTCTCAGACAGCTATGTCCGAGTCACGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012558-T1.utr3p1 | KJC3_012558-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_8.8 |
DBxref | InterPro:IPR007219 |
DBxref | PFAM:PF04082 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:3914504..3916198 + |
|