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KJC3_012579-T1, KJC3_012579-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012579-T1
Unique NameKJC3_012579-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3976132..3977537+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012579-T1 ID=KJC3_012579-T1|Name=KJC3_012579-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1406bp|location=Sequence derived from alignment at ch8:3976132..3977537+ (Aspergillus niger KJC3)
ATGAAGGACAGCACACGGGCGCATTGGCCCGGGAGTGTCCGCTTTGCGCC
CGCACATTCTCTAGAAGGTGCGTATACACTATTTCTTAGGTAGACAAATA
CGTATGTAACCCTCTGACTCTTTTCAAGTGACTCTCTTCGTCGCCATATC
CGTCTCGACCACGGCCCGGACGAGCCAACCCGGGTAACTCGAGCCTGCCG
GCGCTGTCGCCTAGCCAAAATCCGCTGCAGTGGAGGCGCTCCCTGTAGTC
GCTGTTCCGCCCAGACACGGCAGTGTGTCTATGACGACCCCCAAAGACCT
CAACAGCAGGATCAACAACCTCAGTTATCGGCATCAACTCAACCATTACC
GACATCGCAGTCCCTGGAGGACCACACGCTTCCTTGCTCTCCCCTCCCCA
CTGTCGAAGACCAAGACTCGACCGCCCATTTCCTCCCTTATATCCACCTT
TATTTCGCCCATTTCCACTCCCATTGGCCCATCCTGCATCGAGCCACCTT
TAATGCCTCTGATGAGCCACCATTGCTCTTACAGGCTGTCTCTGTGATCG
GGTTATGGGTTAGTAATAAGCCTTCAGCTCGAGAGGCGGCGATCAGTCTG
CACCGGAAACAGGGCCATTCCATACTAGCACAGCAGGTAAGTCTCCTTCT
TCCTCACAAGCACCCCCCCAGAAAAACGCACAGTCTAAAGGATGACCCAG
GAAAAATGGACACGCGCCCTCCCATTCCAAACAGAAACTTCCAACAACAA
TTCAACAGGTTCGCAAGCGACCGCATCCCGATGTCCCGTGGCGACATACC
AAGCAATCCTTCTATACCTGATCTTTTCCTTCATTCTGAGGAGCCACGGC
ATTAACCACACCACAGTCAACAATAATGATAATACTGACATCTGCACCAC
CCCACGCTCCCTCGACCTGACCCTCTCCCTCTCCCCCATGGACCAACACA
TCCTCTCCCTCCTGGTCAGCACTTGCCTCCGCAATCGAATATTCTACTAT
CCACAGATGATGGAACGGTATCATCATACCATGCAATCTGTCACGTGCAT
TTGGATTGGAATGGAGGAACTCAAACGGCTCGGTTTGGCAATGTATCGAC
TTTGCCGACTCTGTGGGAGGGAGAACGATTTGCCAGGAAGCGAAAAAGAT
GAAGCGATTGTGGGGAACGGGAGGCTAGTATTGCGAATTTCTGATCTACA
ATTTCCCCCTCCAGATAGTCGACATCTCTGGGAGGCACAGTCGGATCGGG
AGCTGTCACGGTTACTGCAGATGGAGGCGTGCCGGGGTGGGACGCGGCTG
GATGGTCGTGACGAGGGGAATTGGATTTCGTCGTGTGGGAGGCTGTTGGA
TGGTGCGGAAATGGAGCAGTGGTGGTTTTGATAGAAAATATGTTCGTAAA
TAGTTC
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Coding sequence (CDS) from alignment at ch8:3976132..3977537+

>KJC3_012579-T1 ID=KJC3_012579-T1|Name=KJC3_012579-T1|organism=Aspergillus niger KJC3|type=CDS|length=3780bp|location=Sequence derived from alignment at ch8:3976132..3977537+ (Aspergillus niger KJC3)
ATGAAGGACAGCACACGGGCGCATTGGCCCGGGAGTGTCCGCTTTGCGCC
CGCACATTCTCTAGAAGGTGCTGACTCTCTTCGTCGCCATATCCGTCTCG
ACCACGGCCCGGACGAGCCAACCCGGGTAACTCGAGCCTGCCGGCGCTGT
CGCCTAGCCAAAATCCGCTGCAGTGGAGGCGCTCCCTGTAGTCGCTGTTC
CGCCCAGACACGGCAGTGTGTCTATGACGACCCCCAAAGACCTCAACAGC
AGGATCAACAACCTCAGTTATCGGCATCAACTCAACCATTACCGACATCG
CAGTCCCTGGAGGACCACACGCTTCCTTGCTCTCCCCTCCCCACTGTCGA
AGACCAAGACTCGACCGCCCATTTCCTCCCTTATATCCACCTTTATTTCG
CCCATTTCCACTCCCATTGGCCCATCCTGCATCGAGCCACCTTTAATGCC
TCTGATGAGCCACCATTGCTCTTACAGGCTGTCTCTGTGATCGGGTTATG
GGTTAGTAATAAGCCTTCAGCTCGAGAGGCGGCGATCAGTCTGCACCGGA
AACAGGGCCATTCCATACTAGCACAGCAGGAAAAATGGACACGCGCCCTC
CCATTCCAAACAGAAACTTCCAACAACAATTCAACAGGTTCGCAAGCGAC
CGCATCCCGATGTCCCGTGGCGACATACCAAGCAATCCTTCTATACCTGA
TCTTTTCCTTCATTCTGAGGAGCCACGGCATTAACCACACCACAGTCAAC
AATAATGATAATACTGACATCTGCACCACCCCACGCTCCCTCGACCTGAC
CCTCTCCCTCTCCCCCATGGACCAACACATCCTCTCCCTCCTGGTCAGCA
CTTGCCTCCGCAATCGAATATTCTACTATCCACAGATGATGGAACGGTAT
CATCATACCATGCAATCTGTCACGTGCATTTGGATTGGAATGGAGGAACT
CAAACGGCTCGGTTTGGCAATGTATCGACTTTGCCGACTCTGTGGGAGGG
AGAACGATTTGCCAGGAAGCGAAAAAGATGAAGCGATTGTGGGGAACGGG
AGGCTAGTATTGCGAATTTCTGATCTACAATTTCCCCCTCCAGATAGTCG
ACATCTCTGGGAGGCACAGTCGGATCGGGAGCTGTCACGGTTACTGCAGA
TGGAGGCGTGCCGGGGTGGGACGCGGCTGGATGGTCGTGACGAGGGGAAT
TGGATTTCGTCGTGTGGGAGGCTGTTGGATGGTGCGGAAATGGAGCAGTG
GTGGTTTTGAATGAAGGACAGCACACGGGCGCATTGGCCCGGGAGTGTCC
GCTTTGCGCCCGCACATTCTCTAGAAGGTGCTGACTCTCTTCGTCGCCAT
ATCCGTCTCGACCACGGCCCGGACGAGCCAACCCGGGTAACTCGAGCCTG
CCGGCGCTGTCGCCTAGCCAAAATCCGCTGCAGTGGAGGCGCTCCCTGTA
GTCGCTGTTCCGCCCAGACACGGCAGTGTGTCTATGACGACCCCCAAAGA
CCTCAACAGCAGGATCAACAACCTCAGTTATCGGCATCAACTCAACCATT
ACCGACATCGCAGTCCCTGGAGGACCACACGCTTCCTTGCTCTCCCCTCC
CCACTGTCGAAGACCAAGACTCGACCGCCCATTTCCTCCCTTATATCCAC
CTTTATTTCGCCCATTTCCACTCCCATTGGCCCATCCTGCATCGAGCCAC
CTTTAATGCCTCTGATGAGCCACCATTGCTCTTACAGGCTGTCTCTGTGA
TCGGGTTATGGGTTAGTAATAAGCCTTCAGCTCGAGAGGCGGCGATCAGT
CTGCACCGGAAACAGGGCCATTCCATACTAGCACAGCAGGAAAAATGGAC
ACGCGCCCTCCCATTCCAAACAGAAACTTCCAACAACAATTCAACAGGTT
CGCAAGCGACCGCATCCCGATGTCCCGTGGCGACATACCAAGCAATCCTT
CTATACCTGATCTTTTCCTTCATTCTGAGGAGCCACGGCATTAACCACAC
CACAGTCAACAATAATGATAATACTGACATCTGCACCACCCCACGCTCCC
TCGACCTGACCCTCTCCCTCTCCCCCATGGACCAACACATCCTCTCCCTC
CTGGTCAGCACTTGCCTCCGCAATCGAATATTCTACTATCCACAGATGAT
GGAACGGTATCATCATACCATGCAATCTGTCACGTGCATTTGGATTGGAA
TGGAGGAACTCAAACGGCTCGGTTTGGCAATGTATCGACTTTGCCGACTC
TGTGGGAGGGAGAACGATTTGCCAGGAAGCGAAAAAGATGAAGCGATTGT
GGGGAACGGGAGGCTAGTATTGCGAATTTCTGATCTACAATTTCCCCCTC
CAGATAGTCGACATCTCTGGGAGGCACAGTCGGATCGGGAGCTGTCACGG
TTACTGCAGATGGAGGCGTGCCGGGGTGGGACGCGGCTGGATGGTCGTGA
CGAGGGGAATTGGATTTCGTCGTGTGGGAGGCTGTTGGATGGTGCGGAAA
TGGAGCAGTGGTGGTTTTGAATGAAGGACAGCACACGGGCGCATTGGCCC
GGGAGTGTCCGCTTTGCGCCCGCACATTCTCTAGAAGGTGCTGACTCTCT
TCGTCGCCATATCCGTCTCGACCACGGCCCGGACGAGCCAACCCGGGTAA
CTCGAGCCTGCCGGCGCTGTCGCCTAGCCAAAATCCGCTGCAGTGGAGGC
GCTCCCTGTAGTCGCTGTTCCGCCCAGACACGGCAGTGTGTCTATGACGA
CCCCCAAAGACCTCAACAGCAGGATCAACAACCTCAGTTATCGGCATCAA
CTCAACCATTACCGACATCGCAGTCCCTGGAGGACCACACGCTTCCTTGC
TCTCCCCTCCCCACTGTCGAAGACCAAGACTCGACCGCCCATTTCCTCCC
TTATATCCACCTTTATTTCGCCCATTTCCACTCCCATTGGCCCATCCTGC
ATCGAGCCACCTTTAATGCCTCTGATGAGCCACCATTGCTCTTACAGGCT
GTCTCTGTGATCGGGTTATGGGTTAGTAATAAGCCTTCAGCTCGAGAGGC
GGCGATCAGTCTGCACCGGAAACAGGGCCATTCCATACTAGCACAGCAGG
AAAAATGGACACGCGCCCTCCCATTCCAAACAGAAACTTCCAACAACAAT
TCAACAGGTTCGCAAGCGACCGCATCCCGATGTCCCGTGGCGACATACCA
AGCAATCCTTCTATACCTGATCTTTTCCTTCATTCTGAGGAGCCACGGCA
TTAACCACACCACAGTCAACAATAATGATAATACTGACATCTGCACCACC
CCACGCTCCCTCGACCTGACCCTCTCCCTCTCCCCCATGGACCAACACAT
CCTCTCCCTCCTGGTCAGCACTTGCCTCCGCAATCGAATATTCTACTATC
CACAGATGATGGAACGGTATCATCATACCATGCAATCTGTCACGTGCATT
TGGATTGGAATGGAGGAACTCAAACGGCTCGGTTTGGCAATGTATCGACT
TTGCCGACTCTGTGGGAGGGAGAACGATTTGCCAGGAAGCGAAAAAGATG
AAGCGATTGTGGGGAACGGGAGGCTAGTATTGCGAATTTCTGATCTACAA
TTTCCCCCTCCAGATAGTCGACATCTCTGGGAGGCACAGTCGGATCGGGA
GCTGTCACGGTTACTGCAGATGGAGGCGTGCCGGGGTGGGACGCGGCTGG
ATGGTCGTGACGAGGGGAATTGGATTTCGTCGTGTGGGAGGCTGTTGGAT
GGTGCGGAAATGGAGCAGTGGTGGTTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012579KJC3_012579Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012579-T1.exon1KJC3_012579-T1.exon1Aspergillus niger KJC3exon
KJC3_012579-T1.exon2KJC3_012579-T1.exon2Aspergillus niger KJC3exon
KJC3_012579-T1.exon3KJC3_012579-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012579-T1.cdsKJC3_012579-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012579-T1.utr3p1KJC3_012579-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012579-T1KJC3_012579-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3976132..3977537 +
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