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KJC3_012586-T1, KJC3_012586-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012586-T1
Unique NameKJC3_012586-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4001467..4002263-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012586-T1 ID=KJC3_012586-T1|Name=KJC3_012586-T1|organism=Aspergillus niger KJC3|type=mRNA|length=797bp|location=Sequence derived from alignment at ch8:4001467..4002263- (Aspergillus niger KJC3)
ATGTCTACTACCTTCGACCTTCGCAACCCCGGACGCCCAATCCATGTCGG
CGTTGTCTTGCTCAATACGTGAGTTGCAATGCACACACGACTTCCTAAAC
AGTTCAGTAACTAAATATCCATAATACAGCGTAACCGAGCACCTCGACAT
CGCCCCTATCGGTTTCTTCCACAACTTTGGCAAAGACTTCATCGAGAATC
TCCCACCCTTCGCTATCTCCCCCGAACTCAGATCCCAAGCCCTAGACTTC
GTCACCCACTGGGTCACCGAAGATGGCAAGACACCCGGTTCTCTGAGCGG
AAACCTCAAAGTCATCCCCACGGTACCCCATCCCGATCCTCCACATCACA
AAACAGCCCCATTAACTCCCACAGGACTCCTTCACCACCTGCCCGCCCCT
CGACATCGTACTCATCGGAGCCGGCCAAATGGGCTACCAAGCCACCACCA
CTGAGAAAGCCTTTCTCCGGAAGTGCTATGCGGAATGTTCGGCGTTCCTG
TCTGTTTGCGGCGCATCAGACGCCCTTCTAGCGACGGACATCCTGGAAGG
CAAGACGGCGACAGGTCCACTTTCGTTCTTGCCGTTGTTTCGCCAAATGG
CACCTGGAACGAACTGGGTGGAGAAGAGATGGGTAAGGGATGGGAAGATC
TGGACTACGGGGACTTTGTTGAATGGGCTGGATATGATTGCTGCGTTTGG
GAGGGAGGTCTGGGGTGGTGAGGGGTCGTTGGTGGAACATGTGCTTAGGA
CGGGGTATTTTCCGAGCAGGAATGTGGATTATAAGGATGAAGTGTGA
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Coding sequence (CDS) from alignment at ch8:4001467..4002263-

>KJC3_012586-T1 ID=KJC3_012586-T1|Name=KJC3_012586-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch8:4001467..4002263- (Aspergillus niger KJC3)
GACTCCTTCACCACCTGCCCGCCCCTCGACATCGTACTCATCGGAGCCGG
CCAAATGGGCTACCAAGCCACCACCACTGAGAAAGCCTTTCTCCGGAAGT
GCTATGCGGAATGTTCGGCGTTCCTGTCTGTTTGCGGCGCATCAGACGCC
CTTCTAGCGACGGACATCCTGGAAGGCAAGACGGCGACAGGTCCACTTTC
GTTCTTGCCGTTGTTTCGCCAAATGGCACCTGGAACGAACTGGGTGGAGA
AGAGATGGGTAAGGGATGGGAAGATCTGGACTACGGGGACTTTGTTGAAT
GGGCTGGATATGATTGCTGCGTTTGGGAGGGAGGTCTGGGGTGGTGAGGG
GTCGTTGGTGGAACATGTGCTTAGGACGGGGTATTTTCCGAGCAGGAATG
TGGATTATAAGGATGAAGTGTGACGTAACCGAGCACCTCGACATCGCCCC
TATCGGTTTCTTCCACAACTTTGGCAAAGACTTCATCGAGAATCTCCCAC
CCTTCGCTATCTCCCCCGAACTCAGATCCCAAGCCCTAGACTTCGTCACC
CACTGGGTCACCGAAGATGGCAAGACACCCGGTTCTCTGAGCGGAAACCT
CAAAGTCATCCCCACGATGTCTACTACCTTCGACCTTCGCAACCCCGGAC
GCCCAATCCATGTCGGCGTTGTCTTGCTCAATACGACTCCTTCACCACCT
GCCCGCCCCTCGACATCGTACTCATCGGAGCCGGCCAAATGGGCTACCAA
GCCACCACCACTGAGAAAGCCTTTCTCCGGAAGTGCTATGCGGAATGTTC
GGCGTTCCTGTCTGTTTGCGGCGCATCAGACGCCCTTCTAGCGACGGACA
TCCTGGAAGGCAAGACGGCGACAGGTCCACTTTCGTTCTTGCCGTTGTTT
CGCCAAATGGCACCTGGAACGAACTGGGTGGAGAAGAGATGGGTAAGGGA
TGGGAAGATCTGGACTACGGGGACTTTGTTGAATGGGCTGGATATGATTG
CTGCGTTTGGGAGGGAGGTCTGGGGTGGTGAGGGGTCGTTGGTGGAACAT
GTGCTTAGGACGGGGTATTTTCCGAGCAGGAATGTGGATTATAAGGATGA
AGTGTGACGTAACCGAGCACCTCGACATCGCCCCTATCGGTTTCTTCCAC
AACTTTGGCAAAGACTTCATCGAGAATCTCCCACCCTTCGCTATCTCCCC
CGAACTCAGATCCCAAGCCCTAGACTTCGTCACCCACTGGGTCACCGAAG
ATGGCAAGACACCCGGTTCTCTGAGCGGAAACCTCAAAGTCATCCCCACG
ATGTCTACTACCTTCGACCTTCGCAACCCCGGACGCCCAATCCATGTCGG
CGTTGTCTTGCTCAATACGACTCCTTCACCACCTGCCCGCCCCTCGACAT
CGTACTCATCGGAGCCGGCCAAATGGGCTACCAAGCCACCACCACTGAGA
AAGCCTTTCTCCGGAAGTGCTATGCGGAATGTTCGGCGTTCCTGTCTGTT
TGCGGCGCATCAGACGCCCTTCTAGCGACGGACATCCTGGAAGGCAAGAC
GGCGACAGGTCCACTTTCGTTCTTGCCGTTGTTTCGCCAAATGGCACCTG
GAACGAACTGGGTGGAGAAGAGATGGGTAAGGGATGGGAAGATCTGGACT
ACGGGGACTTTGTTGAATGGGCTGGATATGATTGCTGCGTTTGGGAGGGA
GGTCTGGGGTGGTGAGGGGTCGTTGGTGGAACATGTGCTTAGGACGGGGT
ATTTTCCGAGCAGGAATGTGGATTATAAGGATGAAGTGTGACGTAACCGA
GCACCTCGACATCGCCCCTATCGGTTTCTTCCACAACTTTGGCAAAGACT
TCATCGAGAATCTCCCACCCTTCGCTATCTCCCCCGAACTCAGATCCCAA
GCCCTAGACTTCGTCACCCACTGGGTCACCGAAGATGGCAAGACACCCGG
TTCTCTGAGCGGAAACCTCAAAGTCATCCCCACGATGTCTACTACCTTCG
ACCTTCGCAACCCCGGACGCCCAATCCATGTCGGCGTTGTCTTGCTCAAT
AC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012586KJC3_012586Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012586-T1KJC3_012586-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012586-T1.cdsKJC3_012586-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012586-T1.exon3KJC3_012586-T1.exon3Aspergillus niger KJC3exon
KJC3_012586-T1.exon2KJC3_012586-T1.exon2Aspergillus niger KJC3exon
KJC3_012586-T1.exon1KJC3_012586-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR002818
DBxrefInterPro:IPR029062
DBxrefPFAM:PF01965
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4001467..4002263 -
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