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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4002670..4004214- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012587-T1 ID=KJC3_012587-T1|Name=KJC3_012587-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1545bp|location=Sequence derived from alignment at ch8:4002670..4004214- (Aspergillus niger KJC3)
CGACTTTTTGTTTGCGCAATCACTACTAGTCTGCCCACTTAGGAGACTTC
ACATAAATTGGTTTAACTGAGGGGCCGCACGGATGAACATGTAAATAAAA
GCATGCGTTAACCTCACTTGCAAGGCCTGTTGACGGCAGCCGGCATGCGA
TCAATTGGTTCCAATCACTCATCAGGTCACCCCTTATCAAGATGGGCTCC
TCGATGCCTCTTGTCGGTCATAGTCTGGCCATATTCATCTGCGCGGCGGT
AATGATGAGCGTGAGTATCATGGCGGTCGCGTTGCGCACCTTTGTTCGTC
TTTATACGGTTCGAGCTTTTGGGTGGGACGATGCTTTGATGGTGATCGCC
TTGGTAGTGTTCCGGGTTATCTTAAGATCACGACGGCGACTGATATTCAT
TTAGGCATTATTCATAGCCCTGGATGCATGTTGGATGGTTGCGTCAAAGC
GAGGTGTTGGGCATAAGAACGAGGACTTCACCGATCCTAAGACAATGGAG
CAGGCTCTGCTGGTATGTATAAGTTTCCCTCTACCTCGACGCGAGTAACC
CCATGAACATCCCTGCTCTAACTATACAATATTAGTGGTGGTGGCTATGT
CAAATGCTATATAGTTGGTCGGCCGCGATCACCAAAATATCAATAGCCAT
AGCCCTACTCAGGCTAGCTGTGCAAAAAGCGCACCGCATTGTTCTGTGGG
CAGTGACCTGCCTTGTAACAGTCGCTGGGATAATGATTTGGCTTGTCTTC
CTAGCCGGCTGCCAACCTGTCTCTTATTTCTGGTCGCATGTCACTGCAAA
TCAGCATGGGAGCTGCATACAGCGGCAGATACTGTTAGACATTGGCTATC
TCTACAGCTTCCTGATTGTGTTCTCCGATATTACTCTTGGGATCATGCCC
GCCGTTCTGATCTGGCGCCTGCAAATGGACCGCCGGACAAAGATTGCATT
AGCAGGAGTCCTTAGCCTAGGAGCCCTGTACGTGCACTATTCCCTCGACT
TCAGGAAAGAAAGATGCTGAACCTGTTTTAGAGAGAGCGTCGCCGTGATC
ATTCGGATCCCATACCTGCATACCTACCATGACACCAACCTTCTCTGTGA
GTCCGGTCGAACCTGTCATTTCATCACCACGCCCCTAACCACAGCAGATG
CAACCTACCAAATCGACTTTTGGTCCATCATTGAGATCGGAATTGGCATT
ACCGCAGGGAGTCTCGCCACCCTTCGCCCCTTATTTCTGTGGGTCTTCGA
AACTCGATCATACTATGGAGGTAACTCTCGTGGCAAAAAGCGCAGTGAAG
AGGCGCATCCTCTTTCGAATATCTCCACGGATGCTGAAAGATTACATAAC
TCAGAAAACTGGGGTGCGGATTTTGTTCCAGGCAAGTCGCAGACTCGTCT
AGTAACCACCGTCACATCTCGTCTGAGCCATTCGGATAGAAATCGGGATG
CTTTGATCCTGGGGGCTGGGTCATGGCAGGCTCTATATCAGGTCAATGTT
CAGACAACAATCAAGATCTCAGAGGGAGTGGATGAAGCAATATAA back to topCoding sequence (CDS) from alignment at ch8:4002670..4004214- >KJC3_012587-T1 ID=KJC3_012587-T1|Name=KJC3_012587-T1|organism=Aspergillus niger KJC3|type=CDS|length=5625bp|location=Sequence derived from alignment at ch8:4002670..4004214- (Aspergillus niger KJC3)
ATGCAACCTACCAAATCGACTTTTGGTCCATCATTGAGATCGGAATTGGC
ATTACCGCAGGGAGTCTCGCCACCCTTCGCCCCTTATTTCTGTGGGTCTT
CGAAACTCGATCATACTATGGAGGTAACTCTCGTGGCAAAAAGCGCAGTG
AAGAGGCGCATCCTCTTTCGAATATCTCCACGGATGCTGAAAGATTACAT
AACTCAGAAAACTGGGGTGCGGATTTTGTTCCAGGCAAGTCGCAGACTCG
TCTAGTAACCACCGTCACATCTCGTCTGAGCCATTCGGATAGAAATCGGG
ATGCTTTGATCCTGGGGGCTGGGTCATGGCAGGCTCTATATCAGGTCAAT
GTTCAGACAACAATCAAGATCTCAGAGGGAGTGGATGAAGCAATATAAAG
AGAGCGTCGCCGTGATCATTCGGATCCCATACCTGCATACCTACCATGAC
ACCAACCTTCTCTTGGTGGTGGCTATGTCAAATGCTATATAGTTGGTCGG
CCGCGATCACCAAAATATCAATAGCCATAGCCCTACTCAGGCTAGCTGTG
CAAAAAGCGCACCGCATTGTTCTGTGGGCAGTGACCTGCCTTGTAACAGT
CGCTGGGATAATGATTTGGCTTGTCTTCCTAGCCGGCTGCCAACCTGTCT
CTTATTTCTGGTCGCATGTCACTGCAAATCAGCATGGGAGCTGCATACAG
CGGCAGATACTGTTAGACATTGGCTATCTCTACAGCTTCCTGATTGTGTT
CTCCGATATTACTCTTGGGATCATGCCCGCCGTTCTGATCTGGCGCCTGC
AAATGGACCGCCGGACAAAGATTGCATTAGCAGGAGTCCTTAGCCTAGGA
GCCCTGCATTATTCATAGCCCTGGATGCATGTTGGATGGTTGCGTCAAAG
CGAGGTGTTGGGCATAAGAACGAGGACTTCACCGATCCTAAGACAATGGA
GCAGGCTCTGCTGATGGGCTCCTCGATGCCTCTTGTCGGTCATAGTCTGG
CCATATTCATCTGCGCGGCGGTAATGATGAGCGTGAGTATCATGGCGGTC
GCGTTGCGCACCTTTGTTCGTCTTTATACGGTTCGAGCTTTTGGGTGGGA
CGATGCTTTGATGGTGATCGCCTTGATGCAACCTACCAAATCGACTTTTG
GTCCATCATTGAGATCGGAATTGGCATTACCGCAGGGAGTCTCGCCACCC
TTCGCCCCTTATTTCTGTGGGTCTTCGAAACTCGATCATACTATGGAGGT
AACTCTCGTGGCAAAAAGCGCAGTGAAGAGGCGCATCCTCTTTCGAATAT
CTCCACGGATGCTGAAAGATTACATAACTCAGAAAACTGGGGTGCGGATT
TTGTTCCAGGCAAGTCGCAGACTCGTCTAGTAACCACCGTCACATCTCGT
CTGAGCCATTCGGATAGAAATCGGGATGCTTTGATCCTGGGGGCTGGGTC
ATGGCAGGCTCTATATCAGGTCAATGTTCAGACAACAATCAAGATCTCAG
AGGGAGTGGATGAAGCAATATAAAGAGAGCGTCGCCGTGATCATTCGGAT
CCCATACCTGCATACCTACCATGACACCAACCTTCTCTTGGTGGTGGCTA
TGTCAAATGCTATATAGTTGGTCGGCCGCGATCACCAAAATATCAATAGC
CATAGCCCTACTCAGGCTAGCTGTGCAAAAAGCGCACCGCATTGTTCTGT
GGGCAGTGACCTGCCTTGTAACAGTCGCTGGGATAATGATTTGGCTTGTC
TTCCTAGCCGGCTGCCAACCTGTCTCTTATTTCTGGTCGCATGTCACTGC
AAATCAGCATGGGAGCTGCATACAGCGGCAGATACTGTTAGACATTGGCT
ATCTCTACAGCTTCCTGATTGTGTTCTCCGATATTACTCTTGGGATCATG
CCCGCCGTTCTGATCTGGCGCCTGCAAATGGACCGCCGGACAAAGATTGC
ATTAGCAGGAGTCCTTAGCCTAGGAGCCCTGCATTATTCATAGCCCTGGA
TGCATGTTGGATGGTTGCGTCAAAGCGAGGTGTTGGGCATAAGAACGAGG
ACTTCACCGATCCTAAGACAATGGAGCAGGCTCTGCTGATGGGCTCCTCG
ATGCCTCTTGTCGGTCATAGTCTGGCCATATTCATCTGCGCGGCGGTAAT
GATGAGCGTGAGTATCATGGCGGTCGCGTTGCGCACCTTTGTTCGTCTTT
ATACGGTTCGAGCTTTTGGGTGGGACGATGCTTTGATGGTGATCGCCTTG
ATGCAACCTACCAAATCGACTTTTGGTCCATCATTGAGATCGGAATTGGC
ATTACCGCAGGGAGTCTCGCCACCCTTCGCCCCTTATTTCTGTGGGTCTT
CGAAACTCGATCATACTATGGAGGTAACTCTCGTGGCAAAAAGCGCAGTG
AAGAGGCGCATCCTCTTTCGAATATCTCCACGGATGCTGAAAGATTACAT
AACTCAGAAAACTGGGGTGCGGATTTTGTTCCAGGCAAGTCGCAGACTCG
TCTAGTAACCACCGTCACATCTCGTCTGAGCCATTCGGATAGAAATCGGG
ATGCTTTGATCCTGGGGGCTGGGTCATGGCAGGCTCTATATCAGGTCAAT
GTTCAGACAACAATCAAGATCTCAGAGGGAGTGGATGAAGCAATATAAAG
AGAGCGTCGCCGTGATCATTCGGATCCCATACCTGCATACCTACCATGAC
ACCAACCTTCTCTTGGTGGTGGCTATGTCAAATGCTATATAGTTGGTCGG
CCGCGATCACCAAAATATCAATAGCCATAGCCCTACTCAGGCTAGCTGTG
CAAAAAGCGCACCGCATTGTTCTGTGGGCAGTGACCTGCCTTGTAACAGT
CGCTGGGATAATGATTTGGCTTGTCTTCCTAGCCGGCTGCCAACCTGTCT
CTTATTTCTGGTCGCATGTCACTGCAAATCAGCATGGGAGCTGCATACAG
CGGCAGATACTGTTAGACATTGGCTATCTCTACAGCTTCCTGATTGTGTT
CTCCGATATTACTCTTGGGATCATGCCCGCCGTTCTGATCTGGCGCCTGC
AAATGGACCGCCGGACAAAGATTGCATTAGCAGGAGTCCTTAGCCTAGGA
GCCCTGCATTATTCATAGCCCTGGATGCATGTTGGATGGTTGCGTCAAAG
CGAGGTGTTGGGCATAAGAACGAGGACTTCACCGATCCTAAGACAATGGA
GCAGGCTCTGCTGATGGGCTCCTCGATGCCTCTTGTCGGTCATAGTCTGG
CCATATTCATCTGCGCGGCGGTAATGATGAGCGTGAGTATCATGGCGGTC
GCGTTGCGCACCTTTGTTCGTCTTTATACGGTTCGAGCTTTTGGGTGGGA
CGATGCTTTGATGGTGATCGCCTTGATGCAACCTACCAAATCGACTTTTG
GTCCATCATTGAGATCGGAATTGGCATTACCGCAGGGAGTCTCGCCACCC
TTCGCCCCTTATTTCTGTGGGTCTTCGAAACTCGATCATACTATGGAGGT
AACTCTCGTGGCAAAAAGCGCAGTGAAGAGGCGCATCCTCTTTCGAATAT
CTCCACGGATGCTGAAAGATTACATAACTCAGAAAACTGGGGTGCGGATT
TTGTTCCAGGCAAGTCGCAGACTCGTCTAGTAACCACCGTCACATCTCGT
CTGAGCCATTCGGATAGAAATCGGGATGCTTTGATCCTGGGGGCTGGGTC
ATGGCAGGCTCTATATCAGGTCAATGTTCAGACAACAATCAAGATCTCAG
AGGGAGTGGATGAAGCAATATAAAGAGAGCGTCGCCGTGATCATTCGGAT
CCCATACCTGCATACCTACCATGACACCAACCTTCTCTTGGTGGTGGCTA
TGTCAAATGCTATATAGTTGGTCGGCCGCGATCACCAAAATATCAATAGC
CATAGCCCTACTCAGGCTAGCTGTGCAAAAAGCGCACCGCATTGTTCTGT
GGGCAGTGACCTGCCTTGTAACAGTCGCTGGGATAATGATTTGGCTTGTC
TTCCTAGCCGGCTGCCAACCTGTCTCTTATTTCTGGTCGCATGTCACTGC
AAATCAGCATGGGAGCTGCATACAGCGGCAGATACTGTTAGACATTGGCT
ATCTCTACAGCTTCCTGATTGTGTTCTCCGATATTACTCTTGGGATCATG
CCCGCCGTTCTGATCTGGCGCCTGCAAATGGACCGCCGGACAAAGATTGC
ATTAGCAGGAGTCCTTAGCCTAGGAGCCCTGCATTATTCATAGCCCTGGA
TGCATGTTGGATGGTTGCGTCAAAGCGAGGTGTTGGGCATAAGAACGAGG
ACTTCACCGATCCTAAGACAATGGAGCAGGCTCTGCTGATGGGCTCCTCG
ATGCCTCTTGTCGGTCATAGTCTGGCCATATTCATCTGCGCGGCGGTAAT
GATGAGCGTGAGTATCATGGCGGTCGCGTTGCGCACCTTTGTTCGTCTTT
ATACGGTTCGAGCTTTTGGGTGGGACGATGCTTTGATGGTGATCGCCTTG
ATGCAACCTACCAAATCGACTTTTGGTCCATCATTGAGATCGGAATTGGC
ATTACCGCAGGGAGTCTCGCCACCCTTCGCCCCTTATTTCTGTGGGTCTT
CGAAACTCGATCATACTATGGAGGTAACTCTCGTGGCAAAAAGCGCAGTG
AAGAGGCGCATCCTCTTTCGAATATCTCCACGGATGCTGAAAGATTACAT
AACTCAGAAAACTGGGGTGCGGATTTTGTTCCAGGCAAGTCGCAGACTCG
TCTAGTAACCACCGTCACATCTCGTCTGAGCCATTCGGATAGAAATCGGG
ATGCTTTGATCCTGGGGGCTGGGTCATGGCAGGCTCTATATCAGGTCAAT
GTTCAGACAACAATCAAGATCTCAGAGGGAGTGGATGAAGCAATATAAAG
AGAGCGTCGCCGTGATCATTCGGATCCCATACCTGCATACCTACCATGAC
ACCAACCTTCTCTTGGTGGTGGCTATGTCAAATGCTATATAGTTGGTCGG
CCGCGATCACCAAAATATCAATAGCCATAGCCCTACTCAGGCTAGCTGTG
CAAAAAGCGCACCGCATTGTTCTGTGGGCAGTGACCTGCCTTGTAACAGT
CGCTGGGATAATGATTTGGCTTGTCTTCCTAGCCGGCTGCCAACCTGTCT
CTTATTTCTGGTCGCATGTCACTGCAAATCAGCATGGGAGCTGCATACAG
CGGCAGATACTGTTAGACATTGGCTATCTCTACAGCTTCCTGATTGTGTT
CTCCGATATTACTCTTGGGATCATGCCCGCCGTTCTGATCTGGCGCCTGC
AAATGGACCGCCGGACAAAGATTGCATTAGCAGGAGTCCTTAGCCTAGGA
GCCCTGCATTATTCATAGCCCTGGATGCATGTTGGATGGTTGCGTCAAAG
CGAGGTGTTGGGCATAAGAACGAGGACTTCACCGATCCTAAGACAATGGA
GCAGGCTCTGCTGATGGGCTCCTCGATGCCTCTTGTCGGTCATAGTCTGG
CCATATTCATCTGCGCGGCGGTAATGATGAGCGTGAGTATCATGGCGGTC
GCGTTGCGCACCTTTGTTCGTCTTTATACGGTTCGAGCTTTTGGGTGGGA
CGATGCTTTGATGGTGATCGCCTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012587-T1.utr5p1 | KJC3_012587-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4002670..4004214 - |
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