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KJC3_012595-T2, KJC3_012595-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012595-T2
Unique NameKJC3_012595-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4019411..4021252-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012595-T2 ID=KJC3_012595-T2|Name=KJC3_012595-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1842bp|location=Sequence derived from alignment at ch8:4019411..4021252- (Aspergillus niger KJC3)
GCTGTCTGGAAAGGCTCTTGCCATGGCGGCTATTGGCGGTTGCCGAATCC
CATCTTATGGCGGGCATTCAAGACTCTACTTCGACTTGGCCGTTCACCAA
GTTAAGAGCTTTACGGCCTCCCTGGACGGTGCGGAGTATCAGGATGCACC
CGGTACAGCGACTTGGAATGACGCATATTACAGAAGACTGCTTACCAGTT
TCGAAACCTATATCCTGCTAATCAGGTATAGCGTATGGTCCGAGTTTGCA
GACCTCCGTGAATGGGGGATAAAATCGCTTGCTGATCACGCTATCACGGT
GATGCCTAGGCTTGCAAGAGTCATGAGCGATAATTCACACAACTCCACTT
CATGGCTACTGTGGTTACTGCTAGAAGAGTCGAAGCGTGCGTTATGGTGT
TTCTATTGCCTCGCCGTTAAATGTCGGCACTTTCTGCATTATTCGATATC
AACATTTGAGGTCGTCGTCGGGAACATACACCTCCCTTGTCCAGATTCTC
TCTTCGAAGCCCCTGACGAACAAACATGGACAGGACTCAATAACTCAAAT
GCGCCGCAACACCTGATCGGCTTAACCGTCCCGTCCCAAATAGCATTCTA
CTACCTCATGTCTCAAGAGCCTATGCCTCAGTTAACGCCCAACAAGGTTG
GCACCTACACCAGCCATATTCTTCTCTGCAATCTCTTAGACACTTATGAA
ACCGGTCGGACTAGTTCCTGGAACTTCACATCCCTCGATGCATACCTAGA
TTCAGACATATCGTGTTTCCGGCTTCGCACTGAACTCATCCGTGCCCTGG
ACTACTGGAAATGGCTATTCTGGCGCGATCCGCACGAACTTTGGCACTCC
AGGCACCCAGACCATCAAATAAACAGCATGATGTTGTGTGTGTACCTAGA
GGCACAGATGTGGAGTTCTTCAAAGCCTCATCTACTCAGCGCGTCGCGTC
GCCGAGCAGGTGCTCAACTTGCGTTTGACTTGCTTTCTCTTATCTCTCGT
ACTGGATTTCTCGAGGTAAGCACACAAAGTGGAGAACTTACAACACTGCC
GGGCCCGCATTCGTAGCTTTAGCTTGCATTCTTGCTTCTTTTCCGATTAT
CTTCGCAGTATGCTAATACCCACTTTTGCAAGCGTTCCTCTAGGTTGGGG
CGAAATTGCCGTTTTACGTTGAACCTGTCGTCTACTTCTGCACACGCAGC
CTTGGCCAGGCAATGCTCGCCTGGTACGATAGCCTTGGAGATGTTGAACG
TACTATAGGCAGGGCTACAGATGATGCAGATTGTATGTTGTACGACAAAA
TTCTGGAGTGCTTGAATCGTCTACCTGGGACCCTCGATGGATTCTCTCTT
CCTCGGGTCCAAGGTGGACCCTCCTCTCCCACACCACTATCTCCTCTGTC
TTTTACTAATTCCCTTAGAGATGCCATTGTTAGAGTATGGAGCCTTGTTA
CAGGCGATGATAAATTGGCAAATGAGGGTTTTTGACCGGGAAACCTTTAT
AATAGAGTTCGAAAGCACTGGAGAGACCTAGGATTCTATCCGCACTCCCT
GCGCCATATACGCCTTAACAAACCCTTCTTCATGGCAGGTGGGTGTTAAT
CCAGATACTTTGGACGCTCTATCCAATAGCTCATTCACATTGGCTACTAG
ATTCATCGCTTGGAGCACTAGCTAACTCAGTTGCAAGACATAGCCAGAAA
ACGAGCTATAATGCAGCTGCCTGGGGATGCCTCTTGCCCTGCTTGATCAG
TCTTGCAGACGAGAACTAGATGTCTAACCACAACCTCTAGTATAAGAAAC
TTCAATGGAAGGGTTTAAGAATCTTTACAAATATTAAGTCAG
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Coding sequence (CDS) from alignment at ch8:4019411..4021252-

>KJC3_012595-T2 ID=KJC3_012595-T2|Name=KJC3_012595-T2|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch8:4019411..4021252- (Aspergillus niger KJC3)
CGTTCCTCTAGGTTGGGGCGAAATTGCCGTTTTACGTTGAACCTGTCGTC
TACTTCTGCACACGCAGCCTTGGCCAGGCAATGCTCGCCTGGTACGATAG
CCTTGGAGATGTTGAACGTACTATAGATGCCTAGGCTTGCAAGAGTCATG
AGCGATAATTCACACAACTCCACTTCATGGCTACTGTGGTTACTGCTAGA
AGAGTCGAAGCGTGCGTTATGGTGTTTCTATTGCCTCGCCGTTAAATGTC
GGCACTTTCTGCATTATTCGATATCAACATTTGAGGTCGTCGTCGGGAAC
ATACACCTCCCTTGTCCAGATTCTCTCTTCGAAGCCCCTGACGAACAAAC
ATGGACAGGACTCAATAACTCAAATGCGCCGCAACACCTGATCGGCTTAA
CCGTCCCGTCCCAAATAGCATTCTACTACCTCATGTCTCAAGAGCCTATG
CCTCAGTTAACGCCCAACAAGGTTGGCACCTACACCAGCCATATTCTTCT
CTGCAATCTCTTAGACACTTATGAAACCGGTCGGACTAGTTCCTGGAACT
TCACATCCCTCGATGCATACCTAGATTCAGACATATCGTGTTTCCGGCTT
CGCACTGAACTCATCCGTGCCCTGGACTACTGGAAATGGCTATTCTGGCG
CGATCCGCACGAACTTTGGCACTCCAGGCACCCAGACCATCAAATAAACA
GCATGATGTTGTGTGTGTACCTAGAGGCACAGATGTGGAGTTCTTCAAAG
CCTCATCTACTCAGCGCGTCGCGTCGCCGAGCAGGTGCTCAACTTGCGTT
TGACTTGCTTTCTCTTATCTCTCGTACTGGATTTCTCGAGCGTTCCTCTA
GGTTGGGGCGAAATTGCCGTTTTACGTTGAACCTGTCGTCTACTTCTGCA
CACGCAGCCTTGGCCAGGCAATGCTCGCCTGGTACGATAGCCTTGGAGAT
GTTGAACGTACTATAGATGCCTAGGCTTGCAAGAGTCATGAGCGATAATT
CACACAACTCCACTTCATGGCTACTGTGGTTACTGCTAGAAGAGTCGAAG
CGTGCGTTATGGTGTTTCTATTGCCTCGCCGTTAAATGTCGGCACTTTCT
GCATTATTCGATATCAACATTTGAGGTCGTCGTCGGGAACATACACCTCC
CTTGTCCAGATTCTCTCTTCGAAGCCCCTGACGAACAAACATGGACAGGA
CTCAATAACTCAAATGCGCCGCAACACCTGATCGGCTTAACCGTCCCGTC
CCAAATAGCATTCTACTACCTCATGTCTCAAGAGCCTATGCCTCAGTTAA
CGCCCAACAAGGTTGGCACCTACACCAGCCATATTCTTCTCTGCAATCTC
TTAGACACTTATGAAACCGGTCGGACTAGTTCCTGGAACTTCACATCCCT
CGATGCATACCTAGATTCAGACATATCGTGTTTCCGGCTTCGCACTGAAC
TCATCCGTGCCCTGGACTACTGGAAATGGCTATTCTGGCGCGATCCGCAC
GAACTTTGGCACTCCAGGCACCCAGACCATCAAATAAACAGCATGATGTT
GTGTGTGTACCTAGAGGCACAGATGTGGAGTTCTTCAAAGCCTCATCTAC
TCAGCGCGTCGCGTCGCCGAGCAGGTGCTCAACTTGCGTTTGACTTGCTT
TCTCTTATCTCTCGTACTGGATTTCTCGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012595KJC3_012595Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012595-T2KJC3_012595-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012595-T2.cdsKJC3_012595-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012595-T2.utr3p3KJC3_012595-T2.utr3p3Aspergillus niger KJC3three_prime_UTR
KJC3_012595-T2.utr3p2KJC3_012595-T2.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_012595-T2.utr3p1KJC3_012595-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012595-T2.exon5KJC3_012595-T2.exon5Aspergillus niger KJC3exon
KJC3_012595-T2.exon4KJC3_012595-T2.exon4Aspergillus niger KJC3exon
KJC3_012595-T2.exon3KJC3_012595-T2.exon3Aspergillus niger KJC3exon
KJC3_012595-T2.exon2KJC3_012595-T2.exon2Aspergillus niger KJC3exon
KJC3_012595-T2.exon1KJC3_012595-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012595-T2.utr5p2KJC3_012595-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012595-T2.utr5p1KJC3_012595-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4019411..4021252 -
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