|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4064686..4065920- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012612-T1 ID=KJC3_012612-T1|Name=KJC3_012612-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1235bp|location=Sequence derived from alignment at ch8:4064686..4065920- (Aspergillus niger KJC3)
TGAGATTAGATAGATCAACATCCATATATTTTTGACCCTTTGTCTTGACA
TTTGTTAGTCCCAAGGTTCTAGCTACGAAGCTCTTCATCCTGCTACCCCC
GCACTCTCGCTATTTTTCCATCCCAAGAGTGTGCTCTGTTTCAGGTCTCC
TGATCTTTCCGACATCCATGAGAATGGGGTCCATCACCTATACTCAGTTT
CCAAACCACGCTCCGGACCGCAGTGGAGCAGAGAAGCCAGCAGTATGAGA
ACATCTATTCAATCGCTGTGAGATGGGAGATGGATGATACAAATGCCCAC
GAAGATACAGAGCGCTTCCAAGATATGCTACAGAGCCTCGATACTGGACC
AGCTGAAGTTTTGGTTCTTCGGTCCGATGATAAAATGCCTGAATTCACAT
TGGTAAGGGCTTGGATCAATTTTTCCACCCAAGCGAGACTCACCCCGGAA
CGCAGCTTGATAATCTTCATTATGCAGGCCATGGAGCATCTAAGGACGGG
TCTTTTACCATTACGGATAACAGGATGGAATCCAAGACCATCAATTTCCA
AAATACTATCCTCGATGAGGTCAAGAACCCGGCCAGATTCATTAATACTG
ATTTTCTGTTCATCTTTGATTGCTGTTTTGCTCATTACGCAACTCGAGCA
CCAGAGACTACTCGAAATATTATTGAGATTCTTGCAGCAACAAGCTCAGA
GACAGTTGAAGCAAGAGGCGCAGCAGATAACACCTTCACTGCAAAGCTGG
CTAACGAGATTGCTCGCAGGCAGAGAGCGAATCATGACAGTGTTGATTTT
GCTAGCGTATTCCAAAGCATTCGCGCTCGATCGACGGTTAGGGTGACACC
CACGCATGCCTTGCTGGTTGGTGCAGCTTCAGTTACTTTACCACTGAACG
GACATAAATTGGTAGACCCGCAAGCTATCCCTGCGGATTACACGGCTCTT
TTCAGTGTCAATGTCTCAAGGGATGTCACAGCTCAAGATATGAAAGAGCT
CGTCGCATGGATGCGGGGGCTACCACCGTTTGCGGGATTAAAGATAGAGA
GTGTCTATCGCACTCAATCAACGTGCTTTATCCTGCATGCTGCACTTTCA
GTCTACGCCAAGTTACACAGTATGCAAGGATACACTCTGATTGCAGAAAA
TCCTGGTCCGCGGCTAAATCATCTTCTGCAACTTGAGCCGTCCGAAGAAC
CTACTCAATCGCATGTACACTTGAGGATATGTTGA back to topCoding sequence (CDS) from alignment at ch8:4064686..4065920- >KJC3_012612-T1 ID=KJC3_012612-T1|Name=KJC3_012612-T1|organism=Aspergillus niger KJC3|type=CDS|length=1806bp|location=Sequence derived from alignment at ch8:4064686..4065920- (Aspergillus niger KJC3)
CTTGATAATCTTCATTATGCAGGCCATGGAGCATCTAAGGACGGGTCTTT
TACCATTACGGATAACAGGATGGAATCCAAGACCATCAATTTCCAAAATA
CTATCCTCGATGAGGTCAAGAACCCGGCCAGATTCATTAATACTGATTTT
CTGTTCATCTTTGATTGCTGTTTTGCTCATTACGCAACTCGAGCACCAGA
GACTACTCGAAATATTATTGAGATTCTTGCAGCAACAAGCTCAGAGACAG
TTGAAGCAAGAGGCGCAGCAGATAACACCTTCACTGCAAAGCTGGCTAAC
GAGATTGCTCGCAGGCAGAGAGCGAATCATGACAGTGTTGATTTTGCTAG
CGTATTCCAAAGCATTCGCGCTCGATCGACGGTTAGGGTGACACCCACGC
ATGCCTTGCTGGTTGGTGCAGCTTCAGTTACTTTACCACTGAACGGACAT
AAATTGGTAGACCCGCAAGCTATCCCTGCGGATTACACGGCTCTTTTCAG
TGTCAATGTCTCAAGGGATGTCACAGCTCAAGATATGAAAGAGCTCGTCG
CATGGATGCGGGGGCTACCACCGTTTGCGGGATTAAAGATAGAGAGTGTC
TATCGCACTCAATCAACGTGCTTTATCCTGCATGCTGCACTTTCAGTCTA
CGCCAAGTTACACAGTATGCAAGGATACACTCTGATTGCAGAAAATCCTG
GTCCGCGGCTAAATCATCTTCTGCAACTTGAGCCGTCCGAAGAACCTACT
CAATCGCATGTACACTTGAGGATATGTTGAATGGATGATACAAATGCCCA
CGAAGATACAGAGCGCTTCCAAGATATGCTACAGAGCCTCGATACTGGAC
CAGCTGAAGTTTTGGTTCTTCGGTCCGATGATAAAATGCCTGAATTCACA
TTGCTTGATAATCTTCATTATGCAGGCCATGGAGCATCTAAGGACGGGTC
TTTTACCATTACGGATAACAGGATGGAATCCAAGACCATCAATTTCCAAA
ATACTATCCTCGATGAGGTCAAGAACCCGGCCAGATTCATTAATACTGAT
TTTCTGTTCATCTTTGATTGCTGTTTTGCTCATTACGCAACTCGAGCACC
AGAGACTACTCGAAATATTATTGAGATTCTTGCAGCAACAAGCTCAGAGA
CAGTTGAAGCAAGAGGCGCAGCAGATAACACCTTCACTGCAAAGCTGGCT
AACGAGATTGCTCGCAGGCAGAGAGCGAATCATGACAGTGTTGATTTTGC
TAGCGTATTCCAAAGCATTCGCGCTCGATCGACGGTTAGGGTGACACCCA
CGCATGCCTTGCTGGTTGGTGCAGCTTCAGTTACTTTACCACTGAACGGA
CATAAATTGGTAGACCCGCAAGCTATCCCTGCGGATTACACGGCTCTTTT
CAGTGTCAATGTCTCAAGGGATGTCACAGCTCAAGATATGAAAGAGCTCG
TCGCATGGATGCGGGGGCTACCACCGTTTGCGGGATTAAAGATAGAGAGT
GTCTATCGCACTCAATCAACGTGCTTTATCCTGCATGCTGCACTTTCAGT
CTACGCCAAGTTACACAGTATGCAAGGATACACTCTGATTGCAGAAAATC
CTGGTCCGCGGCTAAATCATCTTCTGCAACTTGAGCCGTCCGAAGAACCT
ACTCAATCGCATGTACACTTGAGGATATGTTGAATGGATGATACAAATGC
CCACGAAGATACAGAGCGCTTCCAAGATATGCTACAGAGCCTCGATACTG
GACCAGCTGAAGTTTTGGTTCTTCGGTCCGATGATAAAATGCCTGAATTC
ACATTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012612-T1.utr5p1 | KJC3_012612-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4064686..4065920 - |
|
