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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4110926..4111812+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012627-T1 ID=KJC3_012627-T1|Name=KJC3_012627-T1|organism=Aspergillus niger KJC3|type=mRNA|length=887bp|location=Sequence derived from alignment at ch8:4110926..4111812+ (Aspergillus niger KJC3)
CTCCGGGGTAAGCTCGCCGCAATAATAAGCAACCCCGGGGTCCAGCGCTG
CTATTAATATATAATTCCGGTCCCTCCTCGGTGACAGTCTGTCTGAATAT
CTGGTTACATCAAAACTTACTAACTCCTCTCCTCTCCGTTCACTGTCGGT
TTACCCTTTCTATCTTCTCTCATAGTCACCATGTCTCTCAAGAACGGTAC
GTCTATCCTCTCATCGCCATCCTAATGGTGAGCTGTGGCTGAACATCGTC
AACCCCCCCTACAGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCATCA
ACTCGACTCTGCAGGCTGATGCTGCCGAGCGCAAAGAGGCCATCAACAAG
GCTAAAGCGGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAAGA
GAGCTGGTATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGCTG
CTCCCGAAGGAGGAAAAGCTGATGGTGAGTTCAAACAATTATTCGCACCA
GATGACGGATCCGATGCTGATGAGGCATCGATGTTATTGCAGTGACTCTC
TCTCTTTCGGATGCCGACTTCAGCGCCCTCGTAAGCGGCAAGGCCAATGC
CCAGAGGCTCTTTATGGGTGGGAAGCTCAAGATCAAGGGCAACATTATGA
AGGCGACCAAGATGGAGCCTGTCCTGAAGAAGGCCCAGGGCAAGGCTAAG
CTATAGATACCCGGTTTTTGTTCGTTATCTTTCTGCTACAGTTGAAACAT
CAATATTGAAACACTGCTGGTATTGTGTTTTTTTATGTATCAGCTGGTAC
TGTTTTCATTGTAGGCTACTGGGCACTGCTACTATCTATGTACTAGGGGT
AGGCTTAAGAATGCTGCGACGTCATTTCAATCAGGTG back to topCoding sequence (CDS) from alignment at ch8:4110926..4111812+ >KJC3_012627-T1 ID=KJC3_012627-T1|Name=KJC3_012627-T1|organism=Aspergillus niger KJC3|type=CDS|length=1170bp|location=Sequence derived from alignment at ch8:4110926..4111812+ (Aspergillus niger KJC3)
ATGTCTCTCAAGAACGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCAT
CAACTCGACTCTGCAGGCTGATGCTGCCGAGCGCAAAGAGGCCATCAACA
AGGCTAAAGCGGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAA
GAGAGCTGGTATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGC
TGCTCCCGAAGGAGGAAAAGCTGATGTGACTCTCTCTCTTTCGGATGCCG
ACTTCAGCGCCCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATG
GGTGGGAAGCTCAAGATCAAGGGCAACATTATGAAGGCGACCAAGATGGA
GCCTGTCCTGAAGAAGGCCCAGGGCAAGGCTAAGCTATAGATGTCTCTCA
AGAACGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACT
CTGCAGGCTGATGCTGCCGAGCGCAAAGAGGCCATCAACAAGGCTAAAGC
GGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAAGAGAGCTGGT
ATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAA
GGAGGAAAAGCTGATGTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGC
CCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATGGGTGGGAAGC
TCAAGATCAAGGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTG
AAGAAGGCCCAGGGCAAGGCTAAGCTATAGATGTCTCTCAAGAACGACGC
TTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACTCTGCAGGCTG
ATGCTGCCGAGCGCAAAGAGGCCATCAACAAGGCTAAAGCGGTGGTCGCC
TTCAACATCAAGAACGACAAGGGCAAAGAAGAGAGCTGGTATCTCGACCT
CAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAAGGAGGAAAAG
CTGATGTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGCCCTCGTAAGC
GGCAAGGCCAATGCCCAGAGGCTCTTTATGGGTGGGAAGCTCAAGATCAA
GGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTGAAGAAGGCCC
AGGGCAAGGCTAAGCTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012627-T1.utr5p1 | KJC3_012627-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012627-T1.utr3p1 | KJC3_012627-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036527 |
| DBxref | InterPro:IPR003033 |
| DBxref | PFAM:PF02036 |
| DBxref | PFAM:PF14864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4110926..4111812 + |
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