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KJC3_012630-T1, KJC3_012630-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012630-T1
Unique NameKJC3_012630-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4118981..4120287-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012630-T1 ID=KJC3_012630-T1|Name=KJC3_012630-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1307bp|location=Sequence derived from alignment at ch8:4118981..4120287- (Aspergillus niger KJC3)
TCCTCATCCTTGACAGTCGACGACCACTGCAGCCCACGACAGCCGACACT
TCTGTCCCTCATTCAGTGAGTGAGATCTTTCCGCAAATTTTGCCTGAACC
TATCATTCTCTCCGCGAGAATCACCCATCCTAACATTCTTCTCTTAACCA
CAGAAATGTCCGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATC
GCCGACGTTGTCACTCGCGAGTACACCATCAACATGCACAAGAGAGTACG
TTGAACACAGCCAAAAACCTGCACTTGAATTCATCACAATCTCGACTCTA
CCTGCGAGCGATTTCCGCGGAACCTCGAAAACATGGAGGCAATTGGACGG
AGAACAAAAAGACAAGCGGGAACCCGAATCCTCGTTCCTCCGCCCACCTC
TACCACTCCCGAACTCGGAGAACAAGAGTGAAGAAGGAGAGGTTCAGGAT
GAGCTTACCGCACCTGTCTGAAAAATTACATGTGTGGAGGAACAATCAGG
AACCAGATTGTCTTTTTTTTTCTGAAAGAGGAAAAAAAAAACAAATCCCA
TAAAAAGAAGAATTAGTTTGATGAAGTCCACCTCTATGGCCGCAATTTCG
CAAAGCAAAATTTCTCAAAATCACATCTATCAGATGGCATTCGGGCGGAA
GACTAATATTCGTTCTTTTTTTGGGTATAGATGCACGGTGTTTCCTTCAA
GAAGCGTGCTCCTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTG
CTATGGTTAGTACCCCCCTTCCCCCCATACTCAAATGGGGGAAAAAAGAG
AAACAACCACCTAACGCTATTCTCATTGAATAGGGCACCACCGACGTCCG
TGTCGACCCCCAGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCG
TCCCCTACCGTCTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAG
GGCGCCAAGGAGAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGA
TGTCAAGGGTCTTCACACCGCCGTTGTCGATGAGGAGTAAATTACTCTTT
CTCCTTGATCGATGAAAAAAAACAACATCATGTATCTTATTCCCCCAAAA
ATGAAGCCCAGATTCTTTGCAAGCTTGACGGGTTTTCTTTTTTCATGATG
GATGATGCAACGGGACGGGGTTCGGCTTTTTGGAAGAGATAATAAAAAAA
TTCCAAAATCACAATTTTTTTGGTCCCTCCACTTTTCATTACCATGTAGA
AGATATAGGTTGACTGATCGTCAGTGATATCGTAATAGTAAAAATGGGAT
TTTGCTG
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Coding sequence (CDS) from alignment at ch8:4118981..4120287-

>KJC3_012630-T1 ID=KJC3_012630-T1|Name=KJC3_012630-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch8:4118981..4120287- (Aspergillus niger KJC3)
GGCACCACCGACGTCCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGA
AGCCGGTGTCAAGGGCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCA
AGCGTAACGACGAGGAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAG
GCTGTCAACGTCAAGGATGTCAAGGGTCTTCACACCGCCGTTGTCGATGA
GGAGTAAATGCACGGTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCA
AGGAGATCCGCGCTTTCGCCACCCGTGCTATGATGTCCGCCCCCGTCAAG
ACCGGCAAGAAGACTCGCTCGGCCATCGCCGACGTTGTCACTCGCGAGTA
CACCATCAACATGCACAAGAGAGGCACCACCGACGTCCGTGTCGACCCCC
AGCTCAACAAGAAGGTCTGGGAAGCCGGTGTCAAGGGCGTCCCCTACCGT
CTCCGTGTCCGCATCTCCCGCAAGCGTAACGACGAGGAGGGCGCCAAGGA
GAAGCTCTACTCCTACGTCCAGGCTGTCAACGTCAAGGATGTCAAGGGTC
TTCACACCGCCGTTGTCGATGAGGAGTAAATGCACGGTGTTTCCTTCAAG
AAGCGTGCTCCTCGTGCTATCAAGGAGATCCGCGCTTTCGCCACCCGTGC
TATGATGTCCGCCCCCGTCAAGACCGGCAAGAAGACTCGCTCGGCCATCG
CCGACGTTGTCACTCGCGAGTACACCATCAACATGCACAAGAGAGGCACC
ACCGACGTCCGTGTCGACCCCCAGCTCAACAAGAAGGTCTGGGAAGCCGG
TGTCAAGGGCGTCCCCTACCGTCTCCGTGTCCGCATCTCCCGCAAGCGTA
ACGACGAGGAGGGCGCCAAGGAGAAGCTCTACTCCTACGTCCAGGCTGTC
AACGTCAAGGATGTCAAGGGTCTTCACACCGCCGTTGTCGATGAGGAGTA
AATGCACGGTGTTTCCTTCAAGAAGCGTGCTCCTCGTGCTATCAAGGAGA
TCCGCGCTTTCGCCACCCGTGCTATGATGTCCGCCCCCGTCAAGACCGGC
AAGAAGACTCGCTCGGCCATCGCCGACGTTGTCACTCGCGAGTACACCAT
CAACATGCACAAGAGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL31KJC3_012630Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012630-T1KJC3_012630-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012630-T1.cdsKJC3_012630-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012630-T1.utr3p1KJC3_012630-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012630-T1.exon4KJC3_012630-T1.exon4Aspergillus niger KJC3exon
KJC3_012630-T1.exon3KJC3_012630-T1.exon3Aspergillus niger KJC3exon
KJC3_012630-T1.exon2KJC3_012630-T1.exon2Aspergillus niger KJC3exon
KJC3_012630-T1.exon1KJC3_012630-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012630-T1.utr5p2KJC3_012630-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012630-T1.utr5p1KJC3_012630-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265EOF
DBxrefInterPro:IPR023621
DBxrefInterPro:IPR000054
DBxrefPFAM:PF01198
Product60S ribosomal protein L31
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4118981..4120287 -
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