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KJC3_012637-T2, KJC3_012637-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012637-T2
Unique NameKJC3_012637-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4135841..4139108+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012637-T2 ID=KJC3_012637-T2|Name=KJC3_012637-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3268bp|location=Sequence derived from alignment at ch8:4135841..4139108+ (Aspergillus niger KJC3)
CTGGGGTCTACAGGGCCCCATTTCATCCCAGCTACCTTCTTGCCGTCTCC TCGGCCTGCGCACGGAACTCCACTCCCTGTAGGTTTCCAAGATTACCGCT TAACCGTTGGATCTATCAAATACAGCGGTGACGCGAAAATCTCCAGCTGT GATGGCTCACTTGGTCCAGAGTGAGCTTTCCCGTCCCAGGGGCCGGTATT CTAACGGCTCAGTAAGGACATGTCAGAACTGTGCCAGAGCAAAGATACGG TGCAATCGCCACGGGGCTACGGGGAGTTGCGAACGGTGAGCTTGTCTGAG CGACCTGATTGTTTGGTGGGCTTACTAGTTCTAGATGCGAACGGCTGGGG AAAGAGTGTCATTTCCCAGAAACCCGAAGCACAAATGGAGGGACCAAGAG AGAGAGCAAGGACAGGTTAGTTGCGAGCCACGGACAAGTAGGTCGCCTTT TAACCAAGCATAGGAGGATCGATCTACTCGAAGCCAAAGTCGATCAGCTG CTAGCGACGTCGGTATCTCCAAGCCTGGTGCGTCGAACACCCTCAATTGC GCTATACAAAGAGACTAACCGTGTCTTAAGAGGGGTAACAGCACGGCCAA TGGGAGCCCTGCAAGCACTGTTTCGCAGTCCAAGGATGCCATTGACAAAG GCTTGCTTACCGTGGAGGCCGCCAACATGCTGCTTAATGAATTTCGGACG ACACTAATGCCTCACTGTCCATTCGTAGTCGTCCCACCACAGACCTCTGC CGAAAGCCTAAGGAAAGACAAGCCGTTTCTCTTCCTTACTATCTTGACGG CTACTCTGTATGACAACATGCCTCTGCAGCGTATGCTCGAAAAAGAGGTG AAGAAGAAGGTTAGCGACTGCATGATTTACGATGGACCCATCTCATTCGA GGTGCTGCAAGGGCTGCTAGTCCACATTGCATGGTACGCCTGATATTCCA TGTCCGAACACTGAGCTGACAAGTTTAGGTGTCAATATCATTCACGGCCA CGCCGGTTCTCTCAATATCTACACCTTGCGATCAGCATTATCACGGACCT GCAACTGGACCGTGCGCATGAGTATCGACTCTGGAGGACTCGAGTGAACT TTAATCCTGAAGAACACAAAGAGTCGGTATCTTGGGGGCACGATGAAAGA CGGGCCGTCCTCGGTATCTTTTATTTCGCATCGAGGTAAGTCTAGGCATC TACTCTACACAGTTACTACCTGCTGGGATTAACGGCTTGTAGCGTTTCGC AGATCCTCCACAAACAATGCACCTTTCCGTATATGCCTTACTTTGATGAC TGCTGCAAGCTTCTGGCCACAGATGCCGAGTATGCCTCCGACCAGCACCT GCTTCATATAGTACAACTTCAACGATTATCGGAGAGGATTACTTTTATTT CATCACAGAACATTCTAGGGACCCACGGCCCTGGCTCAAGCAGTGAGCGT TCGTTTCGTGAGATGAAACTGGAGCTGGAGCAATATCGGGCTAGCCTACC CTGTCCGTTGAATGAAAACAGTAAGCCGACCGATTATGAAAAGCCCATCG ATGCTGATGACCCTCAGATATCCTTTACATGCAATACTATACTGCTGAAC TGTATCTCTGCCAGATCAGCTTGTTCGATCATAAACCCAGTACACAAAGC CCGCGGCGTGAAGTCCCATTTCAAATTGAGGCCCTACGTATGGGTCTCAT TGCGGCCAAAGCGCTACTCGATCACTATGTCTGCCTCCCGTTGCGCAGCG AAATGGCGTTTAACAACGCCATATGGATTCAGATCGGCTTCGCGCTGACT CTGGCGTGCAAGCTTGTTGTAGCAGCATCAGAGCCTTCGATACAGCCTCA CACAGCGGAGTTGTGCCGTGCGCTTGACATATCCAGCATGCTCAGTCGGT GTATCCTCCGCATCCAGGCGCTAGTTACGTCTAGCTTGGATGCCTCCGGT GACCGAGATGTCTTCTACCACTATGAACAGCGACTGAAACGAGTTCAGTG GTGGTTTGGAAACCGGATGTTATCAAAGAATAAGAATGATTCCATTCAAC CTGCGGTGCAACCAACTGACGACATGAGCTCATCCACAGCTGAGAACAGT CACGTTGAATCATCGCAGCTGCCACTGGACGGATTAAATGATTATACGAT GATACCCCCCGAAGTGTACGATATGCAATGGCCGGGTTTCTTTCCCGACG CGACGATTGATGAGATACTCGTCGACTGGATGGAGTACACGAAGGCGTCT GAGCAGCGCTAGCGCTGACTAGGTAGCGCATCCACCACCATCTTACGTCT CTGATTATCACGGTAAAAACGCAGACAGGTCTCCAAATTATATATTAATC AATTAACCCAATTTAATTCCATTACACTGTCAATACCAAAGTAAACACCC TATCCCTCCGCACCCTCGGCTCCCTTCTCACCCCAAACACCACCATCCCC ATCACCCCAAGCGCAACCCCAGCCGCACACCAACCAATCCAATTTCCGAA AAACCACTCCGCCACCGCAACCTCATCCCCACGCGGTCTCTCCTCGACAA ACCGCATAAAGAACGCCTTTTCAGTCCCCTCAAACATGCTCCGGGGCACA ATGCCTACTCTACCCCCAACAGCGGACAACCACACTCCCAGCACCCGGCT CACCAACACCGCCCCGGCACTCACAAAAGCCGTCACATACGCCGGCACAA ACCCCCATCGATGCTCATGCACACTCAACGCCACCTTGATCACAAACGGA TGGTTCGGCTTACTCGCGACGAATTCATTCCCGACCCCGTACGGCCAGTG CTGAGGTAGCAGCGCCTGGTCTTCTTGCTCCTCGCTCAACAAGACACCCG CTGATCCTGTTTCTGACGTGTGGTATGTAGGAGTTGGCTTTCATGGGGAA ATGGTATCATTATATTATAACTAGAGACTACTAAACATGATAATAATAGT CGGACCTGTCTGTCCATAGCACAACTAACTGTAACACCATGATAACCTCC GATCATGCATTCATCATGCTGTCTTATTTGAAGGGTATCTCAGCTTTCTT CAGGCGATTGTTGATTATCACGAACCAGTTTATAGATCTCACACAGTCTC TATAACCCGAGAGTTTCTCCTGCCCTCCTGCCCATTCCCAGTGTCTGCAT TCCCGTTGTTTTTATTCTGGTTGAGATATCGATACCGAGCCACCATTTCC TCACTTAGACATTTTCTTTCATTGATGACTATGCCTGCATCATAACTATA CTTAATATATTAGCTTGG
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Coding sequence (CDS) from alignment at ch8:4135841..4139108+

>KJC3_012637-T2 ID=KJC3_012637-T2|Name=KJC3_012637-T2|organism=Aspergillus niger KJC3|type=CDS|length=5748bp|location=Sequence derived from alignment at ch8:4135841..4139108+ (Aspergillus niger KJC3)
ATGCTGCTTAATGAATTTCGGACGACACTAATGCCTCACTGTCCATTCGT
AGTCGTCCCACCACAGACCTCTGCCGAAAGCCTAAGGAAAGACAAGCCGT
TTCTCTTCCTTACTATCTTGACGGCTACTCTGTATGACAACATGCCTCTG
CAGCGTATGCTCGAAAAAGAGGTGAAGAAGAAGGTTAGCGACTGCATGAT
TTACGATGGACCCATCTCATTCGAGGTGCTGCAAGGGCTGCTAGTCCACA
TTGCATGGTGTCAATATCATTCACGGCCACGCCGGTTCTCTCAATATCTA
CACCTTGCGATCAGCATTATCACGGACCTGCAACTGGACCGTGCGCATGA
GTATCGACTCTGGAGGACTCGAGTGAACTTTAATCCTGAAGAACACAAAG
AGTCGGTATCTTGGGGGCACGATGAAAGACGGGCCGTCCTCGGTATCTTT
TATTTCGCATCGAGCGTTTCGCAGATCCTCCACAAACAATGCACCTTTCC
GTATATGCCTTACTTTGATGACTGCTGCAAGCTTCTGGCCACAGATGCCG
AGTATGCCTCCGACCAGCACCTGCTTCATATAGTACAACTTCAACGATTA
TCGGAGAGGATTACTTTTATTTCATCACAGAACATTCTAGGGACCCACGG
CCCTGGCTCAAGCAGTGAGCGTTCGTTTCGTGAGATGAAACTGGAGCTGG
AGCAATATCGGGCTAGCCTACCCTGTCCGTTGAATGAAAACAATATCCTT
TACATGCAATACTATACTGCTGAACTGTATCTCTGCCAGATCAGCTTGTT
CGATCATAAACCCAGTACACAAAGCCCGCGGCGTGAAGTCCCATTTCAAA
TTGAGGCCCTACGTATGGGTCTCATTGCGGCCAAAGCGCTACTCGATCAC
TATGTCTGCCTCCCGTTGCGCAGCGAAATGGCGTTTAACAACGCCATATG
GATTCAGATCGGCTTCGCGCTGACTCTGGCGTGCAAGCTTGTTGTAGCAG
CATCAGAGCCTTCGATACAGCCTCACACAGCGGAGTTGTGCCGTGCGCTT
GACATATCCAGCATGCTCAGTCGGTGTATCCTCCGCATCCAGGCGCTAGT
TACGTCTAGCTTGGATGCCTCCGGTGACCGAGATGTCTTCTACCACTATG
AACAGCGACTGAAACGAGTTCAGTGGTGGTTTGGAAACCGGATGTTATCA
AAGAATAAGAATGATTCCATTCAACCTGCGGTGCAACCAACTGACGACAT
GAGCTCATCCACAGCTGAGAACAGTCACGTTGAATCATCGCAGCTGCCAC
TGGACGGATTAAATGATTATACGATGATACCCCCCGAAGTGTACGATATG
CAATGGCCGGGTTTCTTTCCCGACGCGACGATTGATGAGATACTCGTCGA
CTGGATGGAGTACACGAAGGCGTCTGAGCAGCGCTAGATGCTGCTTAATG
AATTTCGGACGACACTAATGCCTCACTGTCCATTCGTAGTCGTCCCACCA
CAGACCTCTGCCGAAAGCCTAAGGAAAGACAAGCCGTTTCTCTTCCTTAC
TATCTTGACGGCTACTCTGTATGACAACATGCCTCTGCAGCGTATGCTCG
AAAAAGAGGTGAAGAAGAAGGTTAGCGACTGCATGATTTACGATGGACCC
ATCTCATTCGAGGTGCTGCAAGGGCTGCTAGTCCACATTGCATGGTGTCA
ATATCATTCACGGCCACGCCGGTTCTCTCAATATCTACACCTTGCGATCA
GCATTATCACGGACCTGCAACTGGACCGTGCGCATGAGTATCGACTCTGG
AGGACTCGAGTGAACTTTAATCCTGAAGAACACAAAGAGTCGGTATCTTG
GGGGCACGATGAAAGACGGGCCGTCCTCGGTATCTTTTATTTCGCATCGA
GCGTTTCGCAGATCCTCCACAAACAATGCACCTTTCCGTATATGCCTTAC
TTTGATGACTGCTGCAAGCTTCTGGCCACAGATGCCGAGTATGCCTCCGA
CCAGCACCTGCTTCATATAGTACAACTTCAACGATTATCGGAGAGGATTA
CTTTTATTTCATCACAGAACATTCTAGGGACCCACGGCCCTGGCTCAAGC
AGTGAGCGTTCGTTTCGTGAGATGAAACTGGAGCTGGAGCAATATCGGGC
TAGCCTACCCTGTCCGTTGAATGAAAACAATATCCTTTACATGCAATACT
ATACTGCTGAACTGTATCTCTGCCAGATCAGCTTGTTCGATCATAAACCC
AGTACACAAAGCCCGCGGCGTGAAGTCCCATTTCAAATTGAGGCCCTACG
TATGGGTCTCATTGCGGCCAAAGCGCTACTCGATCACTATGTCTGCCTCC
CGTTGCGCAGCGAAATGGCGTTTAACAACGCCATATGGATTCAGATCGGC
TTCGCGCTGACTCTGGCGTGCAAGCTTGTTGTAGCAGCATCAGAGCCTTC
GATACAGCCTCACACAGCGGAGTTGTGCCGTGCGCTTGACATATCCAGCA
TGCTCAGTCGGTGTATCCTCCGCATCCAGGCGCTAGTTACGTCTAGCTTG
GATGCCTCCGGTGACCGAGATGTCTTCTACCACTATGAACAGCGACTGAA
ACGAGTTCAGTGGTGGTTTGGAAACCGGATGTTATCAAAGAATAAGAATG
ATTCCATTCAACCTGCGGTGCAACCAACTGACGACATGAGCTCATCCACA
GCTGAGAACAGTCACGTTGAATCATCGCAGCTGCCACTGGACGGATTAAA
TGATTATACGATGATACCCCCCGAAGTGTACGATATGCAATGGCCGGGTT
TCTTTCCCGACGCGACGATTGATGAGATACTCGTCGACTGGATGGAGTAC
ACGAAGGCGTCTGAGCAGCGCTAGATGCTGCTTAATGAATTTCGGACGAC
ACTAATGCCTCACTGTCCATTCGTAGTCGTCCCACCACAGACCTCTGCCG
AAAGCCTAAGGAAAGACAAGCCGTTTCTCTTCCTTACTATCTTGACGGCT
ACTCTGTATGACAACATGCCTCTGCAGCGTATGCTCGAAAAAGAGGTGAA
GAAGAAGGTTAGCGACTGCATGATTTACGATGGACCCATCTCATTCGAGG
TGCTGCAAGGGCTGCTAGTCCACATTGCATGGTGTCAATATCATTCACGG
CCACGCCGGTTCTCTCAATATCTACACCTTGCGATCAGCATTATCACGGA
CCTGCAACTGGACCGTGCGCATGAGTATCGACTCTGGAGGACTCGAGTGA
ACTTTAATCCTGAAGAACACAAAGAGTCGGTATCTTGGGGGCACGATGAA
AGACGGGCCGTCCTCGGTATCTTTTATTTCGCATCGAGCGTTTCGCAGAT
CCTCCACAAACAATGCACCTTTCCGTATATGCCTTACTTTGATGACTGCT
GCAAGCTTCTGGCCACAGATGCCGAGTATGCCTCCGACCAGCACCTGCTT
CATATAGTACAACTTCAACGATTATCGGAGAGGATTACTTTTATTTCATC
ACAGAACATTCTAGGGACCCACGGCCCTGGCTCAAGCAGTGAGCGTTCGT
TTCGTGAGATGAAACTGGAGCTGGAGCAATATCGGGCTAGCCTACCCTGT
CCGTTGAATGAAAACAATATCCTTTACATGCAATACTATACTGCTGAACT
GTATCTCTGCCAGATCAGCTTGTTCGATCATAAACCCAGTACACAAAGCC
CGCGGCGTGAAGTCCCATTTCAAATTGAGGCCCTACGTATGGGTCTCATT
GCGGCCAAAGCGCTACTCGATCACTATGTCTGCCTCCCGTTGCGCAGCGA
AATGGCGTTTAACAACGCCATATGGATTCAGATCGGCTTCGCGCTGACTC
TGGCGTGCAAGCTTGTTGTAGCAGCATCAGAGCCTTCGATACAGCCTCAC
ACAGCGGAGTTGTGCCGTGCGCTTGACATATCCAGCATGCTCAGTCGGTG
TATCCTCCGCATCCAGGCGCTAGTTACGTCTAGCTTGGATGCCTCCGGTG
ACCGAGATGTCTTCTACCACTATGAACAGCGACTGAAACGAGTTCAGTGG
TGGTTTGGAAACCGGATGTTATCAAAGAATAAGAATGATTCCATTCAACC
TGCGGTGCAACCAACTGACGACATGAGCTCATCCACAGCTGAGAACAGTC
ACGTTGAATCATCGCAGCTGCCACTGGACGGATTAAATGATTATACGATG
ATACCCCCCGAAGTGTACGATATGCAATGGCCGGGTTTCTTTCCCGACGC
GACGATTGATGAGATACTCGTCGACTGGATGGAGTACACGAAGGCGTCTG
AGCAGCGCTAGATGCTGCTTAATGAATTTCGGACGACACTAATGCCTCAC
TGTCCATTCGTAGTCGTCCCACCACAGACCTCTGCCGAAAGCCTAAGGAA
AGACAAGCCGTTTCTCTTCCTTACTATCTTGACGGCTACTCTGTATGACA
ACATGCCTCTGCAGCGTATGCTCGAAAAAGAGGTGAAGAAGAAGGTTAGC
GACTGCATGATTTACGATGGACCCATCTCATTCGAGGTGCTGCAAGGGCT
GCTAGTCCACATTGCATGGTGTCAATATCATTCACGGCCACGCCGGTTCT
CTCAATATCTACACCTTGCGATCAGCATTATCACGGACCTGCAACTGGAC
CGTGCGCATGAGTATCGACTCTGGAGGACTCGAGTGAACTTTAATCCTGA
AGAACACAAAGAGTCGGTATCTTGGGGGCACGATGAAAGACGGGCCGTCC
TCGGTATCTTTTATTTCGCATCGAGCGTTTCGCAGATCCTCCACAAACAA
TGCACCTTTCCGTATATGCCTTACTTTGATGACTGCTGCAAGCTTCTGGC
CACAGATGCCGAGTATGCCTCCGACCAGCACCTGCTTCATATAGTACAAC
TTCAACGATTATCGGAGAGGATTACTTTTATTTCATCACAGAACATTCTA
GGGACCCACGGCCCTGGCTCAAGCAGTGAGCGTTCGTTTCGTGAGATGAA
ACTGGAGCTGGAGCAATATCGGGCTAGCCTACCCTGTCCGTTGAATGAAA
ACAATATCCTTTACATGCAATACTATACTGCTGAACTGTATCTCTGCCAG
ATCAGCTTGTTCGATCATAAACCCAGTACACAAAGCCCGCGGCGTGAAGT
CCCATTTCAAATTGAGGCCCTACGTATGGGTCTCATTGCGGCCAAAGCGC
TACTCGATCACTATGTCTGCCTCCCGTTGCGCAGCGAAATGGCGTTTAAC
AACGCCATATGGATTCAGATCGGCTTCGCGCTGACTCTGGCGTGCAAGCT
TGTTGTAGCAGCATCAGAGCCTTCGATACAGCCTCACACAGCGGAGTTGT
GCCGTGCGCTTGACATATCCAGCATGCTCAGTCGGTGTATCCTCCGCATC
CAGGCGCTAGTTACGTCTAGCTTGGATGCCTCCGGTGACCGAGATGTCTT
CTACCACTATGAACAGCGACTGAAACGAGTTCAGTGGTGGTTTGGAAACC
GGATGTTATCAAAGAATAAGAATGATTCCATTCAACCTGCGGTGCAACCA
ACTGACGACATGAGCTCATCCACAGCTGAGAACAGTCACGTTGAATCATC
GCAGCTGCCACTGGACGGATTAAATGATTATACGATGATACCCCCCGAAG
TGTACGATATGCAATGGCCGGGTTTCTTTCCCGACGCGACGATTGATGAG
ATACTCGTCGACTGGATGGAGTACACGAAGGCGTCTGAGCAGCGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012637KJC3_012637Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012637-T2KJC3_012637-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012637-T2.utr5p1KJC3_012637-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012637-T2.utr5p2KJC3_012637-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012637-T2.utr5p3KJC3_012637-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012637-T2.exon1KJC3_012637-T2.exon1Aspergillus niger KJC3exon
KJC3_012637-T2.exon2KJC3_012637-T2.exon2Aspergillus niger KJC3exon
KJC3_012637-T2.exon3KJC3_012637-T2.exon3Aspergillus niger KJC3exon
KJC3_012637-T2.exon4KJC3_012637-T2.exon4Aspergillus niger KJC3exon
KJC3_012637-T2.exon5KJC3_012637-T2.exon5Aspergillus niger KJC3exon
KJC3_012637-T2.exon6KJC3_012637-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012637-T2.cdsKJC3_012637-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012637-T2.utr3p1KJC3_012637-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4135841..4139108 +