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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4184290..4186519- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012652-T1 ID=KJC3_012652-T1|Name=KJC3_012652-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2230bp|location=Sequence derived from alignment at ch8:4184290..4186519- (Aspergillus niger KJC3)
CTTCTGGTTCTCCCCCCGTTTGCGCCTAGTTTTTCGACCTCCATTGAGGC
CTTCATTCCTTGAGAGCTCCGTTCTCGAGCTCTCCGATCTCTCATATACT
CCGCGACTCTGTCGGTTCCCTTTGTGCTGGTCTAGTTCGCTAGCAAATTC
CTTGTCAAGCGTGAAGACGCCCCTCTCCCACCACGACCACGCGCCCAATC
TGTATGCGACATCCTCGGTAATCGAGTGCGGAGTTCCTGTCCCTTCGCCG
CCCAACAATTCGACTGCTTTTTATAACTCAACCTGCTGTTACCTTTCAAA
AAGAAACGACAGTTTCGCTACGGGGAAGACAAGTATCATCAATATGGGGG
AGTCCGCCCAGCGCCAGTCCTCGGGACTGGGATCGGTTTGGAAACACCTG
TCTTGGGCACTGGTAAGTCACCTATCCTATGCACACATTCGCCACTATGG
CAATGCTGCTGCTTGTCTGGTAAAAGCTCTGGAATATGTAAACACTGACA
TCGTGTTTTTGAAAATAGTTGACCGTGCAGTGTACGTCCTTTGTCTTGGT
GAGTCGCTCCCGTCGGCTTCGATCATAGCGTACCTGGTTGCTTATATCTT
GTCCTCCCATAGCTATTGCATTATTCCAGGATTATGTCGCCCGCTGGCGG
CAAGCGCTACCTTACGTCAACCACCGTTTTCTTCAATGAGGTCGTCAAGC
TCGCCATCTCCCTGACCATGGCGCTCTACGAGGTTTCGAAGACAGCCCCT
CCTTCAGTACCTGCGACTTCTCTTTTCTTCTCCCTCACAACTGCCATATT
TTCCGGTGATAGCTGGAAGCTTGCTATTCCTGCCTGTCTCTATACGCTTG
CGAATTCGCTGCAGTACATCGCTCTGTCGAACCTGCCGCCAGCCACTTTC
CAAGCATCATACCAATTGAAACTGATCGTTGTGGCCATAGCCAGCTTGGT
ATTGCTCAAGAGACCTGTCTCGCTCCGGAAGTTGGGACTCATGGTCCTTC
TCTTGGCGGGCGTTGCTTTGGTGCAGATGCCCACTGGAAACCCTGACGAT
ATGACCCTCCAAGATGAGACCGCGCGTCTTGCATTCCCGCGGTCTCTGGA
AGAGTGGAAAGCCTCCAAGCTAGGACGTGAGAGTCTACATAAGCGTTCTG
CGACATATGAGGGGATTGAGGAGGATATGATGACCGCCAACCCTCGACTA
AATGCTACCGTTGGCCTCTTGGCCACAGTTGGCGCCTGCCTCGCTTCCGG
CGTTGCAAGCGTCTACTTCGAGAAAGTGCTGAAGGACAGTGCGAAGTCGA
CTTCGCTCTGGATTCGCAACGTGCAGTTGTCCGTCTACTCGATATTCCCG
GCGCTTTTCATTGGGGTTGTTTTCTTGGATGGCGAGAAGGTTGCTGCCAA
TGGCTTTTTCGAGGGCTACAACTGGATTGTTTGGTCTACTGTTGTCGTAC
AGGCTATTGGTGGCATTGCCACGTCCTTCTACATTGGTTATGCATTCCGA
GATGGCAAGAACATGGCCATGGCTGCGAGTATTGTACTCACCACGGTGGC
TAGCGTTTGGCTATTTGAGTTTGAACTCACTGCCAATGTATGTGACCCGT
ATTCCTCCCGTTGTGAGTAGGTGCTAATCTTCACAGTATCTCCTGGGGTC
GTTCGCAGTATTGGTGGTTACTTGCCTTTGCGAGGATGCAAATTCTGCAT
CTGCCCAGGCCAAGCGTCAGACCTTCCGTCCACCCCCAATCCGCGTAGAT
CGCTATGAGAAGGAAAGCAAGAGTGGGGATGCTTCACCAGCCTCCCCATC
GCCTAACGAGATCTCCATAAAGCTTCCTGGTACGCCCTTTCTCTCTACTG
ATGGGCTTTCGACGTCCAGGCCTACATCTCCGGGCCACGTACGCGCTGGC
CGCACCCCAAGCGGTGGATATTTCGAAAAGCACTCACGAGACAACTGAAC
TACAATTTGCGGATATTATATTCGCATCTTTCGCGTAGGAATAACCTTCG
CGTTGCTGTATCATGTTTTTCTGGGAAGTAAATAAGGATGGATAGAAGCG
ATGATGCCACTTTTGCTTTCGTCATATAGGTTCCACTTTCTTGTACTTTA
TTCACATCATTCCTTTCGTTGTTGATTCTTTCGACTCGCAATCCTACAAC
CCACGAATCATTCTAACATTGAGCAATCTACTTGTCTAGGAATTGAAGAC
TGACAAATTATAAAGACCTTGGTTCAATCG back to topCoding sequence (CDS) from alignment at ch8:4184290..4186519- >KJC3_012652-T1 ID=KJC3_012652-T1|Name=KJC3_012652-T1|organism=Aspergillus niger KJC3|type=CDS|length=5544bp|location=Sequence derived from alignment at ch8:4184290..4186519- (Aspergillus niger KJC3)
TATCTCCTGGGGTCGTTCGCAGTATTGGTGGTTACTTGCCTTTGCGAGGA
TGCAAATTCTGCATCTGCCCAGGCCAAGCGTCAGACCTTCCGTCCACCCC
CAATCCGCGTAGATCGCTATGAGAAGGAAAGCAAGAGTGGGGATGCTTCA
CCAGCCTCCCCATCGCCTAACGAGATCTCCATAAAGCTTCCTGGTACGCC
CTTTCTCTCTACTGATGGGCTTTCGACGTCCAGGCCTACATCTCCGGGCC
ACGTACGCGCTGGCCGCACCCCAAGCGGTGGATATTTCGAAAAGCACTCA
CGAGACAACTGACTATTGCATTATTCCAGGATTATGTCGCCCGCTGGCGG
CAAGCGCTACCTTACGTCAACCACCGTTTTCTTCAATGAGGTCGTCAAGC
TCGCCATCTCCCTGACCATGGCGCTCTACGAGGTTTCGAAGACAGCCCCT
CCTTCAGTACCTGCGACTTCTCTTTTCTTCTCCCTCACAACTGCCATATT
TTCCGGTGATAGCTGGAAGCTTGCTATTCCTGCCTGTCTCTATACGCTTG
CGAATTCGCTGCAGTACATCGCTCTGTCGAACCTGCCGCCAGCCACTTTC
CAAGCATCATACCAATTGAAACTGATCGTTGTGGCCATAGCCAGCTTGGT
ATTGCTCAAGAGACCTGTCTCGCTCCGGAAGTTGGGACTCATGGTCCTTC
TCTTGGCGGGCGTTGCTTTGGTGCAGATGCCCACTGGAAACCCTGACGAT
ATGACCCTCCAAGATGAGACCGCGCGTCTTGCATTCCCGCGGTCTCTGGA
AGAGTGGAAAGCCTCCAAGCTAGGACGTGAGAGTCTACATAAGCGTTCTG
CGACATATGAGGGGATTGAGGAGGATATGATGACCGCCAACCCTCGACTA
AATGCTACCGTTGGCCTCTTGGCCACAGTTGGCGCCTGCCTCGCTTCCGG
CGTTGCAAGCGTCTACTTCGAGAAAGTGCTGAAGGACAGTGCGAAGTCGA
CTTCGCTCTGGATTCGCAACGTGCAGTTGTCCGTCTACTCGATATTCCCG
GCGCTTTTCATTGGGGTTGTTTTCTTGGATGGCGAGAAGGTTGCTGCCAA
TGGCTTTTTCGAGGGCTACAACTGGATTGTTTGGTCTACTGTTGTCGTAC
AGGCTATTGGTGGCATTGCCACGTCCTTCTACATTGGTTATGCATTCCGA
GATGGCAAGAACATGGCCATGGCTGCGAGTATTGTACTCACCACGGTGGC
TAGCGTTTGGCTATTTGAGTTTGAACTCACTGCCAATTTGACCGTGCAGT
GTACGTCCTTTGTCTTGATGGGGGAGTCCGCCCAGCGCCAGTCCTCGGGA
CTGGGATCGGTTTGGAAACACCTGTCTTGGGCACTGTATCTCCTGGGGTC
GTTCGCAGTATTGGTGGTTACTTGCCTTTGCGAGGATGCAAATTCTGCAT
CTGCCCAGGCCAAGCGTCAGACCTTCCGTCCACCCCCAATCCGCGTAGAT
CGCTATGAGAAGGAAAGCAAGAGTGGGGATGCTTCACCAGCCTCCCCATC
GCCTAACGAGATCTCCATAAAGCTTCCTGGTACGCCCTTTCTCTCTACTG
ATGGGCTTTCGACGTCCAGGCCTACATCTCCGGGCCACGTACGCGCTGGC
CGCACCCCAAGCGGTGGATATTTCGAAAAGCACTCACGAGACAACTGACT
ATTGCATTATTCCAGGATTATGTCGCCCGCTGGCGGCAAGCGCTACCTTA
CGTCAACCACCGTTTTCTTCAATGAGGTCGTCAAGCTCGCCATCTCCCTG
ACCATGGCGCTCTACGAGGTTTCGAAGACAGCCCCTCCTTCAGTACCTGC
GACTTCTCTTTTCTTCTCCCTCACAACTGCCATATTTTCCGGTGATAGCT
GGAAGCTTGCTATTCCTGCCTGTCTCTATACGCTTGCGAATTCGCTGCAG
TACATCGCTCTGTCGAACCTGCCGCCAGCCACTTTCCAAGCATCATACCA
ATTGAAACTGATCGTTGTGGCCATAGCCAGCTTGGTATTGCTCAAGAGAC
CTGTCTCGCTCCGGAAGTTGGGACTCATGGTCCTTCTCTTGGCGGGCGTT
GCTTTGGTGCAGATGCCCACTGGAAACCCTGACGATATGACCCTCCAAGA
TGAGACCGCGCGTCTTGCATTCCCGCGGTCTCTGGAAGAGTGGAAAGCCT
CCAAGCTAGGACGTGAGAGTCTACATAAGCGTTCTGCGACATATGAGGGG
ATTGAGGAGGATATGATGACCGCCAACCCTCGACTAAATGCTACCGTTGG
CCTCTTGGCCACAGTTGGCGCCTGCCTCGCTTCCGGCGTTGCAAGCGTCT
ACTTCGAGAAAGTGCTGAAGGACAGTGCGAAGTCGACTTCGCTCTGGATT
CGCAACGTGCAGTTGTCCGTCTACTCGATATTCCCGGCGCTTTTCATTGG
GGTTGTTTTCTTGGATGGCGAGAAGGTTGCTGCCAATGGCTTTTTCGAGG
GCTACAACTGGATTGTTTGGTCTACTGTTGTCGTACAGGCTATTGGTGGC
ATTGCCACGTCCTTCTACATTGGTTATGCATTCCGAGATGGCAAGAACAT
GGCCATGGCTGCGAGTATTGTACTCACCACGGTGGCTAGCGTTTGGCTAT
TTGAGTTTGAACTCACTGCCAATTTGACCGTGCAGTGTACGTCCTTTGTC
TTGATGGGGGAGTCCGCCCAGCGCCAGTCCTCGGGACTGGGATCGGTTTG
GAAACACCTGTCTTGGGCACTGTATCTCCTGGGGTCGTTCGCAGTATTGG
TGGTTACTTGCCTTTGCGAGGATGCAAATTCTGCATCTGCCCAGGCCAAG
CGTCAGACCTTCCGTCCACCCCCAATCCGCGTAGATCGCTATGAGAAGGA
AAGCAAGAGTGGGGATGCTTCACCAGCCTCCCCATCGCCTAACGAGATCT
CCATAAAGCTTCCTGGTACGCCCTTTCTCTCTACTGATGGGCTTTCGACG
TCCAGGCCTACATCTCCGGGCCACGTACGCGCTGGCCGCACCCCAAGCGG
TGGATATTTCGAAAAGCACTCACGAGACAACTGACTATTGCATTATTCCA
GGATTATGTCGCCCGCTGGCGGCAAGCGCTACCTTACGTCAACCACCGTT
TTCTTCAATGAGGTCGTCAAGCTCGCCATCTCCCTGACCATGGCGCTCTA
CGAGGTTTCGAAGACAGCCCCTCCTTCAGTACCTGCGACTTCTCTTTTCT
TCTCCCTCACAACTGCCATATTTTCCGGTGATAGCTGGAAGCTTGCTATT
CCTGCCTGTCTCTATACGCTTGCGAATTCGCTGCAGTACATCGCTCTGTC
GAACCTGCCGCCAGCCACTTTCCAAGCATCATACCAATTGAAACTGATCG
TTGTGGCCATAGCCAGCTTGGTATTGCTCAAGAGACCTGTCTCGCTCCGG
AAGTTGGGACTCATGGTCCTTCTCTTGGCGGGCGTTGCTTTGGTGCAGAT
GCCCACTGGAAACCCTGACGATATGACCCTCCAAGATGAGACCGCGCGTC
TTGCATTCCCGCGGTCTCTGGAAGAGTGGAAAGCCTCCAAGCTAGGACGT
GAGAGTCTACATAAGCGTTCTGCGACATATGAGGGGATTGAGGAGGATAT
GATGACCGCCAACCCTCGACTAAATGCTACCGTTGGCCTCTTGGCCACAG
TTGGCGCCTGCCTCGCTTCCGGCGTTGCAAGCGTCTACTTCGAGAAAGTG
CTGAAGGACAGTGCGAAGTCGACTTCGCTCTGGATTCGCAACGTGCAGTT
GTCCGTCTACTCGATATTCCCGGCGCTTTTCATTGGGGTTGTTTTCTTGG
ATGGCGAGAAGGTTGCTGCCAATGGCTTTTTCGAGGGCTACAACTGGATT
GTTTGGTCTACTGTTGTCGTACAGGCTATTGGTGGCATTGCCACGTCCTT
CTACATTGGTTATGCATTCCGAGATGGCAAGAACATGGCCATGGCTGCGA
GTATTGTACTCACCACGGTGGCTAGCGTTTGGCTATTTGAGTTTGAACTC
ACTGCCAATTTGACCGTGCAGTGTACGTCCTTTGTCTTGATGGGGGAGTC
CGCCCAGCGCCAGTCCTCGGGACTGGGATCGGTTTGGAAACACCTGTCTT
GGGCACTGTATCTCCTGGGGTCGTTCGCAGTATTGGTGGTTACTTGCCTT
TGCGAGGATGCAAATTCTGCATCTGCCCAGGCCAAGCGTCAGACCTTCCG
TCCACCCCCAATCCGCGTAGATCGCTATGAGAAGGAAAGCAAGAGTGGGG
ATGCTTCACCAGCCTCCCCATCGCCTAACGAGATCTCCATAAAGCTTCCT
GGTACGCCCTTTCTCTCTACTGATGGGCTTTCGACGTCCAGGCCTACATC
TCCGGGCCACGTACGCGCTGGCCGCACCCCAAGCGGTGGATATTTCGAAA
AGCACTCACGAGACAACTGACTATTGCATTATTCCAGGATTATGTCGCCC
GCTGGCGGCAAGCGCTACCTTACGTCAACCACCGTTTTCTTCAATGAGGT
CGTCAAGCTCGCCATCTCCCTGACCATGGCGCTCTACGAGGTTTCGAAGA
CAGCCCCTCCTTCAGTACCTGCGACTTCTCTTTTCTTCTCCCTCACAACT
GCCATATTTTCCGGTGATAGCTGGAAGCTTGCTATTCCTGCCTGTCTCTA
TACGCTTGCGAATTCGCTGCAGTACATCGCTCTGTCGAACCTGCCGCCAG
CCACTTTCCAAGCATCATACCAATTGAAACTGATCGTTGTGGCCATAGCC
AGCTTGGTATTGCTCAAGAGACCTGTCTCGCTCCGGAAGTTGGGACTCAT
GGTCCTTCTCTTGGCGGGCGTTGCTTTGGTGCAGATGCCCACTGGAAACC
CTGACGATATGACCCTCCAAGATGAGACCGCGCGTCTTGCATTCCCGCGG
TCTCTGGAAGAGTGGAAAGCCTCCAAGCTAGGACGTGAGAGTCTACATAA
GCGTTCTGCGACATATGAGGGGATTGAGGAGGATATGATGACCGCCAACC
CTCGACTAAATGCTACCGTTGGCCTCTTGGCCACAGTTGGCGCCTGCCTC
GCTTCCGGCGTTGCAAGCGTCTACTTCGAGAAAGTGCTGAAGGACAGTGC
GAAGTCGACTTCGCTCTGGATTCGCAACGTGCAGTTGTCCGTCTACTCGA
TATTCCCGGCGCTTTTCATTGGGGTTGTTTTCTTGGATGGCGAGAAGGTT
GCTGCCAATGGCTTTTTCGAGGGCTACAACTGGATTGTTTGGTCTACTGT
TGTCGTACAGGCTATTGGTGGCATTGCCACGTCCTTCTACATTGGTTATG
CATTCCGAGATGGCAAGAACATGGCCATGGCTGCGAGTATTGTACTCACC
ACGGTGGCTAGCGTTTGGCTATTTGAGTTTGAACTCACTGCCAATTTGAC
CGTGCAGTGTACGTCCTTTGTCTTGATGGGGGAGTCCGCCCAGCGCCAGT
CCTCGGGACTGGGATCGGTTTGGAAACACCTGTCTTGGGCACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000139 | Golgi membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012652-T1.utr3p1 | KJC3_012652-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012652-T1.utr5p1 | KJC3_012652-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007271 |
| DBxref | PFAM:PF04142 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4184290..4186519 - |
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