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KJC3_012658-T1, KJC3_012658-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012658-T1
Unique NameKJC3_012658-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4208987..4210450+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012658-T1 ID=KJC3_012658-T1|Name=KJC3_012658-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1464bp|location=Sequence derived from alignment at ch8:4208987..4210450+ (Aspergillus niger KJC3)
CGAAATTAATTGAAGTTCTTCTTCTTTCCTTTCCCTTGACTGTCAATCCT
GCACCCAACGCCGCCGCGGATCCCGTCGACAAAATGGTAAGCACATAGAA
TCGTCCATTTCACGCCTCTTCTATTCAATTAGAATTGAGCTATCGACTAC
GCTGCGAATATGTCGTGTGACGATTTCCACGTCCCGCTTCATCTCGCAAC
AGTCGAGAAGCGACAATAAAAAAAATTTCCGTTGATTCGCTCTCTTCACA
GTCCGTAAAACGATTGTGAAGGGGTGGATCAGCGATGATTTTTGGCTGGA
AGACACAAAGCTGTTCTTAAGGAAACTTGGGACAGTTTTGTGTCTCTCCC
TAGAGTTCAAGGAAGATGCAGCAAGATGGTGGACAAGATTGCTGATCTTC
TTTTCTCAATGATAGCCTGCCCAGAAGTCCGGAAAGAAGACTGCCCCCCT
CCCTTACCCCCAGGGTAAGGCTGGCGCTAAGAAGGCTCCCAAGGTATGTG
CTGACACCCTACATCAACTACTGAAACCACCATGAGAGAGATATATACTA
ACATGGTATGGATAGAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGG
CATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGT
GGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGT
CTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAA
CACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCA
AGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAG
GGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGG
TCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCC
TGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCT
CTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCG
TCTCGGTACCGTTGTCCACAAGAAGGTATTTATCCCCTTGTATATATCTC
TCTACCCTCCAATAGCATTAAACTAATGAGTTGGAATAGACCTCCGCTGT
CCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGC
TCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGC
CGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGA
GAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAGCTAGCTAGC
AGCGAGCTAACAACACCGACGGGATAAAAAAAATTATACCATCAACGAAA
CTTTAATGACTTCTTCGTCTTTCCTCTTTTATACCTCTTCATGTACACGT
TGCAGATACCCATG
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Coding sequence (CDS) from alignment at ch8:4208987..4210450+

>KJC3_012658-T1 ID=KJC3_012658-T1|Name=KJC3_012658-T1|organism=Aspergillus niger KJC3|type=CDS|length=3168bp|location=Sequence derived from alignment at ch8:4208987..4210450+ (Aspergillus niger KJC3)
ATGCCTGCCCAGAAGTCCGGAAAGAAGACTGCCCCCCTCCCTTACCCCCA
GGGTAAGGCTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGC
GCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTC
GGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAA
GATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGA
ACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAG
TACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGC
CACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCT
ACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAG
AAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGT
TGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTG
TTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCT
GTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAA
GCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCC
GCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAG
GAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGCCTGC
CCAGAAGTCCGGAAAGAAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGG
CTGGCGCTAAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGC
AACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTT
CGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGA
ACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTG
GACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCC
CGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCG
TCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTC
AAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTC
CCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCC
TTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGC
AAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGC
TCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCT
CCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCAC
TGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAA
GCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAATGCCTGCCCAGAAGT
CCGGAAAGAAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCT
AAGAAGGCTCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGG
CATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGT
GGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGT
CTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAA
CACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCA
AGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAG
GGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGG
TCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCC
TGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCT
CTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCG
TCTCGGTACCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGCTCTCACCG
AGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGTC
AAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTGG
TGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAGG
CCGTTGAGGGTGCCATCCGTGTCTAAATGCCTGCCCAGAAGTCCGGAAAG
AAGACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCTAAGAAGGC
TCCCAAGAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGGCATTGGCC
AGGACATCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGTGGCCCGAG
TATGTCCGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGTCTCAAGGT
CCCTCCTTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAACACCGCTG
CCCAGACCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCAAGGTCGAG
AAGAAGGAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAGGGCAAGAA
GAAGGAGGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGGTCTCAACC
ACGTTGTCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCCTGATTGCT
CACGACGTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCTCTTTGCCG
CAAGATGGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCGTCTCGGTA
CCGTTGTCCACAAGAAGACCTCCGCTGTCCTCGCTCTCACCGAGGTCCGC
TCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGTCAAGGAGGG
CTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTGGTGGTATCA
TGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAGGCCGTTGAG
GGTGCCATCCGTGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL8KJC3_012658Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012658-T1KJC3_012658-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012658-T1.utr5p1KJC3_012658-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012658-T1.exon1KJC3_012658-T1.exon1Aspergillus niger KJC3exon
KJC3_012658-T1.exon2KJC3_012658-T1.exon2Aspergillus niger KJC3exon
KJC3_012658-T1.exon3KJC3_012658-T1.exon3Aspergillus niger KJC3exon
KJC3_012658-T1.exon4KJC3_012658-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012658-T1.cdsKJC3_012658-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012658-T1.utr3p1KJC3_012658-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR004037
DBxrefInterPro:IPR038524
DBxrefInterPro:IPR004038
DBxrefInterPro:IPR001921
DBxrefInterPro:IPR018492
DBxrefPFAM:PF01248
Product60S ribosomal protein L8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4208987..4210450 +
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