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KJC3_012665-T1, KJC3_012665-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012665-T1
Unique NameKJC3_012665-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4228816..4229990-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012665-T1 ID=KJC3_012665-T1|Name=KJC3_012665-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1175bp|location=Sequence derived from alignment at ch8:4228816..4229990- (Aspergillus niger KJC3)
GCTGCTAAATCGTTCATTCAGCACTGGCCCCTCGGCCCATGTCTTCCGAC
TTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCC
CCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGATGTCG
CCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGATAGCGCTACTTCT
CTTGTTCGAGGTTTGCAAATCTTCCGATCATGTAAATTACGCGTCTAGTA
TTAACCGTTTCACCAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCT
CAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGAAGTTCCTGGATA
GTTCAATCATTGACCCTACAAACCCACAAGGTGTCCCCTTAAGCAAGATC
TGGCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTGTGTCATCTCC
GACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCACGACCCGGGGTGT
CGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGGACGGGC
CTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGG
GTTTTAGTATGTGAATCCCTTCCCCGGATCATCCCCCGCTATTTCATTGC
GGCTCTTCACGGAGTATTGACATACATTCTTCTCTGCAGCTTTTGGTCTT
ACGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGATGATGCGACCATG
ACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGGAATTGTTACCTG
GGCATCTGTCTTCCCATTAGATGTGATCAAGACAAGACTGCAGGCGAGGA
CGATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAG
CCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGCTTATCTCAATGA
AGGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCT
TCATAGTCAATGCTGTTCAGGTATGTTAATCTGAGCTTGAAATGTTGTAC
CGCATTGCTAACGATCCATTCCAAGTGGGCGGCATACGAGTGGCTGATGA
AGTATTTACAAAATCCATAAACGTACAATGCAACAATGCCCAAGCATCTA
CAAACTACGGAGTACTCCGCAAGGA
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Coding sequence (CDS) from alignment at ch8:4228816..4229990-

>KJC3_012665-T1 ID=KJC3_012665-T1|Name=KJC3_012665-T1|organism=Aspergillus niger KJC3|type=CDS|length=3552bp|location=Sequence derived from alignment at ch8:4228816..4229990- (Aspergillus niger KJC3)
TGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCATAACTTTT
GGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGATGATGCG
ACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGGAATTGT
TACCTGGGCATCTGTCTTCCCATTAGATGTGATCAAGACAAGACTGCAGG
CGAGGACGATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCA
GCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGCTTATCT
CAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAGTGTGA
GGGCCTTCATAGTCAATGCTGTTCAGGCGCCGCTGCACCAATACTCGGAT
ATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGAAG
TTCCTGGATAGTTCAATCATTGACCCTACAAACCCACAAGGTGTCCCCTT
AAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTG
TGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCACGA
CCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGG
CTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAA
TTGGCTATGGGTTTTAATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCG
GTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATCAAAGTGCGG
TTGCAGGCAGGAAGCACTCCAGATGTCGCCGCCTCAACCACATCCCAGCA
ACTGAGTCGCTTTGATAGCGCTACTTCTCTTGTTCGAGTGGGCGGCATAC
GAGTGGCTGATGAAGTATTTACAAAATCCATAACTTTTGGTCTTACGAGT
ACTGCAAGCGGCTTACGGCCTCTAATGACGATGATGCGACCATGACTGCT
ACGAAAGTCTTATTATGCGGTGGTATTGCTGGAATTGTTACCTGGGCATC
TGTCTTCCCATTAGATGTGATCAAGACAAGACTGCAGGCGAGGACGATTG
AATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATAC
ACCGCAAGCTCCATTCAAATTGCCAAAGAAGCTTATCTCAATGAAGGACT
CAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAG
TCAATGCTGTTCAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCA
ATGCACTACTCTTTGTGGCTTATAACCGATCCTTGAAGTTCCTGGATAGT
TCAATCATTGACCCTACAAACCCACAAGGTGTCCCCTTAAGCAAGATCTG
GCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTGTGTCATCTCCGA
CGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCACGACCCGGGGTGTCG
TCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCT
TTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGT
TTTAATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAA
TCATCATCGGCAATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGA
AGCACTCCAGATGTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTT
TGATAGCGCTACTTCTCTTGTTCGAGTGGGCGGCATACGAGTGGCTGATG
AAGTATTTACAAAATCCATAACTTTTGGTCTTACGAGTACTGCAAGCGGC
TTACGGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTA
TTATGCGGTGGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATT
AGATGTGATCAAGACAAGACTGCAGGCGAGGACGATTGAATTGTCCCCAG
AACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCC
ATTCAAATTGCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCTTTCTA
TCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAGTCAATGCTGTTC
AGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCT
TTGTGGCTTATAACCGATCCTTGAAGTTCCTGGATAGTTCAATCATTGAC
CCTACAAACCCACAAGGTGTCCCCTTAAGCAAGATCTGGCTTGCCGGTGC
GGCAGGCGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCA
AATGTAGGGCCCAGCTTGACTCACGACCCGGGGTGTCGTCATGGACAGTT
GCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAGG
AGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTAATGTCTTC
CGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCA
ATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGAT
GTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGATAGCGCTAC
TTCTCTTGTTCGAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAA
AATCCATAACTTTTGGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTA
ATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGT
ATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGATCAA
GACAAGACTGCAGGCGAGGACGATTGAATTGTCCCCAGAACATCGCCCCT
TGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCC
AAAGAAGCTTATCTCAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGG
AGTTTGTAGTGTGAGGGCCTTCATAGTCAATGCTGTTCAGGCGCCGCTGC
ACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATA
ACCGATCCTTGAAGTTCCTGGATAGTTCAATCATTGACCCTACAAACCCA
CAAGGTGTCCCCTTAAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGT
GGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCC
AGCTTGACTCACGACCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATT
GTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTG
TGCTAGAGATGCAATTGGCTATGGGTTTTAATGTCTTCCGACTTCTGGGC
TGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATG
TCATCAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGATGTCGCCGCCTCA
ACCACATCCCAGCAACTGAGTCGCTTTGATAGCGCTACTTCTCTTGTTCG
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005347ATP transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012665KJC3_012665Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012665-T1KJC3_012665-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012665-T1.cdsKJC3_012665-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012665-T1.utr3p1KJC3_012665-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012665-T1.exon4KJC3_012665-T1.exon4Aspergillus niger KJC3exon
KJC3_012665-T1.exon3KJC3_012665-T1.exon3Aspergillus niger KJC3exon
KJC3_012665-T1.exon2KJC3_012665-T1.exon2Aspergillus niger KJC3exon
KJC3_012665-T1.exon1KJC3_012665-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012665-T1.utr5p1KJC3_012665-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4228816..4229990 -
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