|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4286926..4288264- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012684-T1 ID=KJC3_012684-T1|Name=KJC3_012684-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1339bp|location=Sequence derived from alignment at ch8:4286926..4288264- (Aspergillus niger KJC3) TCATACAGCGTGAAACGCAACGGCGTCAAGTCGCATATTTGTGACAGCTT
GTCTTCTATACTGTGCTTATTCCTATTTTGTTGCATTAGTGTCTCTCAAT
CGGCTTAGTTGCAGCCTTCAATTTGGGTACACAGTCTCAGAATCATCATG
GATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACCCAC
GACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATGGTT
ATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAATGCC
TTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGAGGC
CAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCAGTG
AAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGTGTG
GACTTTCCGGAGGTAATTGCGACGGTGAATAATGTCTGTCTTCCCTCTAT
AAGCTGACGATCGGTTACAGGCGCCCATTCCCGAATCTTTTCGGAGAGCC
AAGCAAGCAGAGGCACAGAATGGTATGGTCACAGCTGCGCGAAAGGGAGA
TCCAACTACTAATAGCACGCATAGAGGCAGAAGCAGAACAGCTGAAAGCG
ACCACTGAAGCGGAGATGACATTCATGTGAGATCTGGTTACTCCCCGGGC
CAGTTGTTTCATGCTTTTTTGCATCATACTAACGACATGACGTACTTAGG
ACTACGGATACTTCCTTCATCGAACATCCTCCAAGCACCGTCTCCTCCAA
GCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACCACCAGAGGATCTA
CGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGGCACCAATCGTGGC
GCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTACGGTGAAGGCAGGA
ACCCGGATGGTAGAAATTTTGAACAGGGCGCAGACGGTTGAGCCTGAAGA
GGCACAAAGACTTGCGCGAAGGGAACGGTTTGCTATTGGCAATCCGTGGA
GAATCCCTGCAATTCGCAACGCGCTCCCAAACCTTGAAAGGAACCCCGTT
CCTGAAAGAACATACGGCGATGATTGTCGTAACACAAAGCCTGCCGAGCG
GCCTGTCCGATCTCAGCGGCTCGGATCTTTCTTAAGGAAATTCTAGCTAG
CCCCAGGGTGTAGAGTTAGGGTAGGCTGGCGATAGTCCCGTCTAGTGACC
GAAGAACTTTTCCAGAGACTACGAAGAGATCTGGGTCACGTATGGTTGCA
TTACGAATAATGATCAATGCAAGACGTTCATGTGTTGGG back to topCoding sequence (CDS) from alignment at ch8:4286926..4288264- >KJC3_012684-T1 ID=KJC3_012684-T1|Name=KJC3_012684-T1|organism=Aspergillus niger KJC3|type=CDS|length=2448bp|location=Sequence derived from alignment at ch8:4286926..4288264- (Aspergillus niger KJC3) GACTACGGATACTTCCTTCATCGAACATCCTCCAAGCACCGTCTCCTCCA AGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACCACCAGAGGATCT ACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGGCACCAATCGTGG CGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTACGGTGAAGGCAGA AGCAGAACAGCTGAAAGCGACCACTGAAGCGGAGATGACATTCATGCGCC CATTCCCGAATCTTTTCGGAGAGCCAAGCAAGCAGAGGCACAGAATGATG GATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACCCAC GACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATGGTT ATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAATGCC TTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGAGGC CAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCAGTG AAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGTGTG GACTTTCCGGAGGACTACGGATACTTCCTTCATCGAACATCCTCCAAGCA CCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACC ACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGG CACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTAC GGTGAAGGCAGAAGCAGAACAGCTGAAAGCGACCACTGAAGCGGAGATGA CATTCATGCGCCCATTCCCGAATCTTTTCGGAGAGCCAAGCAAGCAGAGG CACAGAATGATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTC ATCGCGACCCACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTG AAGCTCATGGTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCT GCCATCAATGCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGC CGACCTCGAGGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGA CCCGGTTCAGTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAAT GCGTTCTGTGTGGACTTTCCGGAGGACTACGGATACTTCCTTCATCGAAC ATCCTCCAAGCACCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCCCCG TCGCGTGGCACCACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCGCTA TGCGACACGGGGCACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCCGCG GACGAGGATTACGGTGAAGGCAGAAGCAGAACAGCTGAAAGCGACCACTG AAGCGGAGATGACATTCATGCGCCCATTCCCGAATCTTTTCGGAGAGCCA AGCAAGCAGAGGCACAGAATGATGGATGCTTTTTCCCGCTCATCGTCTCG CCCACGGCCCTCATCGCGACCCACGACCCCCCTAAGACCCAGTTCCCGGT CGTCGATCCGTGAAGCTCATGGTTATGGCAACAGTATTGGTATGGCAGGC TACACCCAGCCTGCCATCAATGCCTTAGAGCCCCAGTTTGCAGAGCTTGC AGACTCCATGGCCGACCTCGAGGCCAACTTCATGCACCTTCAGCTGATGC ACGAAAGTTTGACCCGGTTCAGTGAAAGCTTTGCCAGTTTTCTCTATGGT TTGAACATGAATGCGTTCTGTGTGGACTTTCCGGAGGACTACGGATACTT CCTTCATCGAACATCCTCCAAGCACCGTCTCCTCCAAGCCTTCGGCAAAA ATCCCAGCCCCGTCGCGTGGCACCACCAGAGGATCTACGCGTGGTTCGAC AAGCAGTCGCTATGCGACACGGGGCACCAATCGTGGCGCCCGTCCAAGCG CATTGCCCCGCGGACGAGGATTACGGTGAAGGCAGAAGCAGAACAGCTGA AAGCGACCACTGAAGCGGAGATGACATTCATGCGCCCATTCCCGAATCTT TTCGGAGAGCCAAGCAAGCAGAGGCACAGAATGATGGATGCTTTTTCCCG CTCATCGTCTCGCCCACGGCCCTCATCGCGACCCACGACCCCCCTAAGAC CCAGTTCCCGGTCGTCGATCCGTGAAGCTCATGGTTATGGCAACAGTATT GGTATGGCAGGCTACACCCAGCCTGCCATCAATGCCTTAGAGCCCCAGTT TGCAGAGCTTGCAGACTCCATGGCCGACCTCGAGGCCAACTTCATGCACC TTCAGCTGATGCACGAAAGTTTGACCCGGTTCAGTGAAAGCTTTGCCAGT TTTCTCTATGGTTTGAACATGAATGCGTTCTGTGTGGACTTTCCGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0072686 | mitotic spindle |
GO:0042729 | DASH complex |
Vocabulary: Biological Process
Term | Definition |
GO:0008608 | attachment of spindle microtubules to kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012684-T1.utr3p1 | KJC3_012684-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012684-T1.utr5p1 | KJC3_012684-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09265J36 |
DBxref | InterPro:IPR013962 |
DBxref | PFAM:PF08653 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:4286926..4288264 - |
|