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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4347139..4348763+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012707-T1 ID=KJC3_012707-T1|Name=KJC3_012707-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch8:4347139..4348763+ (Aspergillus niger KJC3)
TTCGCGGGGTATTTTCTAGCTCAACTTTGCGCTGCTCAGCCCGACATCCC
GGAACTGCACCTGATCATCGCATATTCCATATCAACGACAGCGTTGTCTA
TGAACTCTCTTCGTCGGCAATCCGTCCGCCTCTATTGCACAATGTCTGCT
TCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAGCTCCATGAG
GAAGCTGTATGCTTTCCGTCACCTATATTGGTCAATCAAGCTTACATATG
GCTAATTTCTTCAATGCAACAGCTACCCCGAGTCATTGGCAGATAAGAGC
TGGGACAACACCGGCCGTAAGCTCTCATCCGTCCTCCGCCAATCTTCCAT
CCCATTAACTTTATATCCCAGTCCTCCTCGAAGCGCCCTTCGACCACACC
CGCAGACAGAAAAACTCAGTCCTCCTAGCAATTGACCTCACCAAAGCAGT
TGCAGACGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACCGTA
CGCAATGCCCCCTACACCTGCACACCCCATCACCTACTCACACAGTTCCT
CCGCAGACCCGATCATCTTCCGTGGCCTCAAATCCATCACCTTCAACGAT
CCTCAACAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCATCAGCGTCTA
CTCCCCGCACACAGCCATCGACGCAACCCCCGGCGGCATGGCCGACTGGC
TCTGCGACATCGTCACCGGCGCCATCGCCCCAACAAGCACCACCAAGCCC
ACTATCCAGAAATCCTCCTCAACACACTACTCCCACGCCACCTTCCCCGA
CCCACAGCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCCGAACCACAA
TCATCCCCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCAGCGGGAATG
GGGCGCATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGCCGTCGTGGA
CCGCATTGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCATCGCTATTC
CGCAGACCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTCGGCGTATGT
CCCGGCTCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGGGAAGATCCC
CGATCTGCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGTTGGCGGCCG
TGGAGCGTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAATACGGAGCGC
GGGTATCTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGCGGTGAAGAA
GGAGTGGGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTGCGGTGCTGA
AGGAGGTCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGTGAGAAGGAT
CGTGATCCGTATGGTATTATGATTCGACAGGTCTAGAGTTGCTGCTGCAT
CTACTAGCAATCATATATATACATACAAAATACCATATAAGCTAGAGTTC
ACATACAAACGAACAAACAAATGCTATCAGAAACAATACACACACATAGC
GTACTATATACACCCACTACCCCAACCTTCTACCTACTTAGCCACTGCAT
GAATTGAATGATATTCTCATAAGAAGTGAAATCAACTCAACAAAACCCGA
ATCTCCCCCGTCGTCCTAGGGAACA back to topCoding sequence (CDS) from alignment at ch8:4347139..4348763+ >KJC3_012707-T1 ID=KJC3_012707-T1|Name=KJC3_012707-T1|organism=Aspergillus niger KJC3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch8:4347139..4348763+ (Aspergillus niger KJC3)
ATGAACTCTCTTCGTCGGCAATCCGTCCGCCTCTATTGCACAATGTCTGC
TTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAGCTCCATGA
GGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCTGGGACAACACCGGC
CTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGACAGAAAAACTCAGT
CCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGACGAAGCAATTGCCC
GTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCATCTTCCGTGGCCTC
AAATCCATCACCTTCAACGATCCTCAACAATCATCCCTCCTCCGTCTCGC
CCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGCCATCGACGCAACCC
CCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCACCGGCGCCATCGCC
CCAACAAGCACCACCAAGCCCACTATCCAGAAATCCTCCTCAACACACTA
CTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTCCCG
TGCCCCATGTCCGAACCACAATCATCCCCTCTCCGCCCCCAGTGCCCGAG
GGCATGGACTCAGCGGGAATGGGGCGCATCGTCACCTTCGACGAGCCCCA
GCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGGCGTTGGATATCCCG
GCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTGAAG
ATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCTGAA
GGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGAGTC
ACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCGCTG
GCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGAGAA
GTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGGGTT
TGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGTGTT
GTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGTATTATGATTCGACA
GGTCTAGATGAACTCTCTTCGTCGGCAATCCGTCCGCCTCTATTGCACAA
TGTCTGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAGC
TCCATGAGGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCTGGGACAA
CACCGGCCTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGACAGAAAA
ACTCAGTCCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGACGAAGCA
ATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCATCTTCCG
TGGCCTCAAATCCATCACCTTCAACGATCCTCAACAATCATCCCTCCTCC
GTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGCCATCGAC
GCAACCCCCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCACCGGCGC
CATCGCCCCAACAAGCACCACCAAGCCCACTATCCAGAAATCCTCCTCAA
CACACTACTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTCCCCCGCG
ACTCCCGTGCCCCATGTCCGAACCACAATCATCCCCTCTCCGCCCCCAGT
GCCCGAGGGCATGGACTCAGCGGGAATGGGGCGCATCGTCACCTTCGACG
AGCCCCAGCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGGCGTTGGA
TATCCCGGCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGGTTGAGGA
CCTGAAGATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCGAGTATCC
TGCTGAAGGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCACTGGCGAG
TTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGGTTGTGGT
TGCGCTGGCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCAGTGATGC
GGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCAGAGAGAG
GAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGGATGCGGA
GTGTGTTGTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGTATTATGA
TTCGACAGGTCTAGATGAACTCTCTTCGTCGGCAATCCGTCCGCCTCTAT
TGCACAATGTCTGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGT
GGTGAGCTCCATGAGGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCT
GGGACAACACCGGCCTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGA
CAGAAAAACTCAGTCCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGA
CGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCA
TCTTCCGTGGCCTCAAATCCATCACCTTCAACGATCCTCAACAATCATCC
CTCCTCCGTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGC
CATCGACGCAACCCCCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCA
CCGGCGCCATCGCCCCAACAAGCACCACCAAGCCCACTATCCAGAAATCC
TCCTCAACACACTACTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTC
CCCCGCGACTCCCGTGCCCCATGTCCGAACCACAATCATCCCCTCTCCGC
CCCCAGTGCCCGAGGGCATGGACTCAGCGGGAATGGGGCGCATCGTCACC
TTCGACGAGCCCCAGCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGG
CGTTGGATATCCCGGCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGG
TTGAGGACCTGAAGATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCG
AGTATCCTGCTGAAGGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCAC
TGGCGAGTTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGG
TTGTGGTTGCGCTGGCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCA
GTGATGCGGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCA
GAGAGAGGAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGG
ATGCGGAGTGTGTTGTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGT
ATTATGATTCGACAGGTCTAGATGAACTCTCTTCGTCGGCAATCCGTCCG
CCTCTATTGCACAATGTCTGCTTCATACCCCACTTCATCGCCATTCACGC
AGGCAGTGGTGAGCTCCATGAGGAAGCTCTACCCCGAGTCATTGGCAGAT
AAGAGCTGGGACAACACCGGCCTCCTCCTCGAAGCGCCCTTCGACCACAC
CCGCAGACAGAAAAACTCAGTCCTCCTAGCAATTGACCTCACCAAAGCAG
TTGCAGACGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACCAC
CCGATCATCTTCCGTGGCCTCAAATCCATCACCTTCAACGATCCTCAACA
ATCATCCCTCCTCCGTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCCGC
ACACAGCCATCGACGCAACCCCCGGCGGCATGGCCGACTGGCTCTGCGAC
ATCGTCACCGGCGCCATCGCCCCAACAAGCACCACCAAGCCCACTATCCA
GAAATCCTCCTCAACACACTACTCCCACGCCACCTTCCCCGACCCACAGC
CTGCTTCCCCCGCGACTCCCGTGCCCCATGTCCGAACCACAATCATCCCC
TCTCCGCCCCCAGTGCCCGAGGGCATGGACTCAGCGGGAATGGGGCGCAT
CGTCACCTTCGACGAGCCCCAGCCCCTGACTGCCGTCGTGGACCGCATTG
CCCAGGGCGTTGGATATCCCGGCGGTATCCCCATCGCTATTCCGCAGACC
GCCTCGGTTGAGGACCTGAAGATCCGCACAGTCGGCGTATGTCCCGGCTC
CGGGTCGAGTATCCTGCTGAAGGGCACGGGCGGGAAGATCCCCGATCTGC
TTTTCACTGGCGAGTTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGCGT
GGGTCGGTTGTGGTTGCGCTGGCGCATTCGAATACGGAGCGCGGGTATCT
GCGTGCAGTGATGCGGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTGGG
AGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTC
TTTGAGGATGCGGAGTGTGTTGTGGATGTTAGTGAGAAGGATCGTGATCC
GTATGGTATTATGATTCGACAGGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012707-T1.utr5p1 | KJC3_012707-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012707-T1.utr3p1 | KJC3_012707-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263UQF |
| DBxref | InterPro:IPR036069 |
| DBxref | InterPro:IPR002678 |
| DBxref | PFAM:PF01784 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4347139..4348763 + |
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