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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4355853..4357033+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012712-T1 ID=KJC3_012712-T1|Name=KJC3_012712-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1181bp|location=Sequence derived from alignment at ch8:4355853..4357033+ (Aspergillus niger KJC3)
CCCCAGTAGGATCTTAGAATCATCATCAATGTGTGACGTGTGAAGTCTTC
ATTACTTGAAGCTACTACTATAATTGTTCCTCGGCCGGCGACCCGAACAC
CCCGCCCCCACCATCAAAGTTCCGCTCCGCGCAGCTCAGCTTTTCCTGTC
CTCCATATCACAACATACTCACAAATCATCCCATACATCTCCTTTCCATT
ACTACTACAAAGAATTACATCCGCCTACAAAGAAAGAACCATCGCCCATC
TCTCACCGAACCACACCATACCACCACCACCACACCACACATCCCATTCA
CTCATTTCCATAGCATCATCCATCCATCCATCCATCCCACCATGACCTCA
ACAACAGCAACAACAACATACACCTCGCAACCCCTCTACGGCGGCGCCAT
CAAAGGCCTTATCCCCAAAGGCTGGTTAGATGCCAGGTAAATCTTCTTCC
CTTTCCCTATCTCCACTCCACAACCAAACCCTCAAATACTGATAATAAGG
AATAGTAACCTCCGCCAAATCCCGGACCACCAAGAACTCTACCTCTCCCC
GACAACCCTCTCGACCCTCATCTACGAAATAAACGAATACGTCCCCGACA
GCACAAGTCAGGAAACTTTATCTAAGCATAGTGATCTATTTGCTTCTGCC
ACCGGCGGCACCACCACCCAGAATCAAGATAGAGAAACTCTCGATAAAGC
CGCCATCCTCTACCACATTCTCGATGTCCATGACAGTGACAATGTCAGCA
AAGATACTATTCAATTCCGCACTCCTATCATGAGCGTGCCTCATCGGGAC
CAATGGCGGGGAGGGAGGGTATACACGGGGAATGTGTCGTTGGGGTCGGC
GAATCCAGTTGCGAAGGATGGGGTGCTTTGTCGATTTGTGGTGGTGAGGT
TGGAGGAGCAGGGGAGTGATTTGGTGGTTTGGGGGAATGTGCCTGTTAAG
GAGTTTCTGGAGAAGGGGGATGAGGATGGGTTGAGGGTCGAGGAGGGCGT
TGTTGGGGGGTGTGTGGAGGCGTTGGTTGGTGATGAGGATGGGTTTGTTG
TTGTCGATTGGGATTTGTTTGGGTAGGGAGGGATCTTTGTTGTCTTTTAA
TGTTTGGTGAAGGAGGAATGATACCATTATGCGTATGTACTAGGTAGTTA
CTTAGATAGGTTAGATAAAATCAAAGGATCA back to topCoding sequence (CDS) from alignment at ch8:4355853..4357033+ >KJC3_012712-T1 ID=KJC3_012712-T1|Name=KJC3_012712-T1|organism=Aspergillus niger KJC3|type=CDS|length=1332bp|location=Sequence derived from alignment at ch8:4355853..4357033+ (Aspergillus niger KJC3)
ATGACCTCAACAACAGCAACAACAACATACACCTCGCAACCCCTCTACGG
CGGCGCCATCAAAGGCCTTATCCCCAAAGGCTGGTTAGATGCCAGTAACC
TCCGCCAAATCCCGGACCACCAAGAACTCTACCTCTCCCCGACAACCCTC
TCGACCCTCATCTACGAAATAAACGAATACGTCCCCGACAGCACAAGTCA
GGAAACTTTATCTAAGCATAGTGATCTATTTGCTTCTGCCACCGGCGGCA
CCACCACCCAGAATCAAGATAGAGAAACTCTCGATAAAGCCGCCATCCTC
TACCACATTCTCGATGTCCATGACAGTGACAATGTCAGCAAAGATACTAT
TCAATTCCGCACTCCTATCATGAGCGTGCCTCATCGGGACCAATGGCGGG
GAGGGAGGGTATACACGGGGAATGTGTCGTTGGGGTCGGCGAATCCAGTT
GCGAAGGATGGGGTGCTTTGTCGATTTGTGGTGGTGAGGTTGGAGGAGCA
GGGGAGTGATTTGGTGGTTTGGGGGAATGTGCCTGTTAAGGAGTTTCTGG
AGAAGGGGGATGAGGATGGGTTGAGGGTCGAGGAGGGCGTTGTTGGGGGG
TGTGTGGAGGCGTTGGTTGGTGATGAGGATGGGTTTGTTGTTGTCGATTG
GGATTTGTTTGGGTAGATGACCTCAACAACAGCAACAACAACATACACCT
CGCAACCCCTCTACGGCGGCGCCATCAAAGGCCTTATCCCCAAAGGCTGG
TTAGATGCCAGTAACCTCCGCCAAATCCCGGACCACCAAGAACTCTACCT
CTCCCCGACAACCCTCTCGACCCTCATCTACGAAATAAACGAATACGTCC
CCGACAGCACAAGTCAGGAAACTTTATCTAAGCATAGTGATCTATTTGCT
TCTGCCACCGGCGGCACCACCACCCAGAATCAAGATAGAGAAACTCTCGA
TAAAGCCGCCATCCTCTACCACATTCTCGATGTCCATGACAGTGACAATG
TCAGCAAAGATACTATTCAATTCCGCACTCCTATCATGAGCGTGCCTCAT
CGGGACCAATGGCGGGGAGGGAGGGTATACACGGGGAATGTGTCGTTGGG
GTCGGCGAATCCAGTTGCGAAGGATGGGGTGCTTTGTCGATTTGTGGTGG
TGAGGTTGGAGGAGCAGGGGAGTGATTTGGTGGTTTGGGGGAATGTGCCT
GTTAAGGAGTTTCTGGAGAAGGGGGATGAGGATGGGTTGAGGGTCGAGGA
GGGCGTTGTTGGGGGGTGTGTGGAGGCGTTGGTTGGTGATGAGGATGGGT
TTGTTGTTGTCGATTGGGATTTGTTTGGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012712-T1.utr5p1 | KJC3_012712-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012712-T1.utr3p1 | KJC3_012712-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264IKZ |
| DBxref | InterPro:IPR007681 |
| DBxref | InterPro:IPR016123 |
| DBxref | PFAM:PF04603 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4355853..4357033 + |
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