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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4357016..4359653- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012713-T1 ID=KJC3_012713-T1|Name=KJC3_012713-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch8:4357016..4359653- (Aspergillus niger KJC3)
CCAGCACCAGCTCACACGCAGGTACACTACACCCACATCTGCAAGCCCGC
AGACACCACATACACCAAGCCCCAACATTCCAGCAGGTGCAGTCTGACAT
CTCACATCCTGTCCTGCAGGAGTGGGAGGAGCAAAAGAGGAGCCCTTGCT
CGTACCACACCAGCAGCAGCAGCCGCCGCAACGAACAAGAAGACAAGATA
AGACCACAATGGCTCGACTCAACCCCTCTAGCCCCACGAAGCCAGCCAAG
CTCCAAGAGCGCCGAACACCACCCGCGCAGAGGAATCTCAACCGCACAGC
GACCATCAAGCGGGACTCCAGAGACAACAAATACACCGCGACAGCCAAGG
CCAAGACAGTAGAACAATGGGCAGCCGCCGACGAGACATGGACAAAGAGC
CGATACTCCGCGAGCACGCCAGCGATCGAAGAACCGTCGCAAAGGAAGAA
TAACAACAGACTACAAAGATCGGGGACTGTTTCTAGTGGGGTATTCGATA
TCTTTTCGGACAATGGGGATGAGCAGAGTGAAACGGAGGACAGCAGTTTC
TCGTCGACTCGGTCTTTGATGTCGAATGAGGGACGCACTACGGATCCTTT
GAAGCTCTCGCAGATCAATTCTTTGTTGCTTCCATTGTCGCAGCAGTCGC
GGAATAATAGGGCGCCGCGTAAGTCGGTGGGGTATAATTATGACAAGGAA
AATGATCCTATCGACGATGAGGCAGAGGAGGCAGATGAGAGTTCGGGTCT
CTCTCGAAACTCGTCTACTGCTTCGAACCGAGCGCCCACGCGTAATACTA
ACAGAGAAGTGCAGCCGCGGGGCAGGTCTCGGACGAGGTATATGGGATAC
CGCCGGGAGGAGACAGAGTCTGAGGCTGAAGAAAGCGAAGAGAATAATGG
CTTTGACTCAATGGATGATTTCATTGTCAGCGACAACGAAGAAATCAGCT
ACCATGAGACGTCCGACGATGAAAGCATCGAAGAAGAACAAGAAGAGAAA
CAGCCAACTCCTTCGCCGCCCAGGACTAGAAAGAGACTGCTTAGAGGGAG
ACGACCCCGTCCAGAAATAGAGCCAGAGACAACACCTCAGGATTCTCGGC
GTGAAAGCCTCGATTTAGAGCCTTCAGTGCCTGCTACGATGACAATGGAG
GTTCCTAAGCTAGAGGCAAAGCCCAAGAGATTGTTTCAAAGCGAGTTGGA
AATATCCGAGAAGCTGAACAAGCTGAAGTTGGACAATAAAGACATAGAGC
CCCAACTGGACGAGAAGAGCACTTATGAGTGAGTTTTGATGGAGACCCCC
AGCCACCCATATATGTACTAACACCATGTAGCAGTATCGAAGAAGTAGAC
GCCCCCACCAAGAAGCTCCCATCAAGGGATAGTGTTCAACTGGAGACGCC
CCCATCCAGTCCAACAAAGGGACGCAGTCTACGATCTCCAACCAAGCTGA
AGGCCCACATACCACCAACACCACACCGAGAAAGCGTCGACGCATTCTGG
AGCCAGGAAAACACTAACAACTGGATCGACCAGCACTCTCCGTGCAAGAT
CGACGATCTACTGCGCGAATTTGACGACTCCGACTCGGATGATGAGTTCA
GCGACAGGGAGATTATGCCCAAGACCGCAACACCGAAGACGACGACCAAG
TCCTCGACAAGAACACCCAGCAAGACAGCAATGAAAAAGGCCGAAGCAGA
GCAGAGAAAGCTCGAGCGGGAGCGTGCAAAGGCATTCATGGAGAACAGAC
AAGCCATGGCCGAGCAATTCTTCAAAGTCCTCGACGACACCGTAACCGAC
GGCCGACTCTCAAGAATGACCGCCTCGACAGGAGGCGTGATCATCGAATG
GAAAAAGCGACTCCAAACGACCGCCGGCAGAGCATCCTGGAAATGTGTTA
CCCCGTCACCGAAGAAGGGAGGAGGGCCGGCCATGCCACCGCAGCATTAT
GCCACCATCGAATTAGCAGCAAAGGTAGTCGACTGCGAAGAACGCATTAT
CAAGACGGTCGCTCACGAGTTCTGTCATCTGGCGAACTACATGATCTCAG
GCGTGCATGATAACCCCCATGGGGCAAGCTTTAAGGCATGGGGTCGCAAG
TGCAAGGAAGCAATGAAGAACCATCCTGTCTATGGTGGGAAAGTCGAGGT
CTCGATCAAGCACGACTACGCTATCGACTATAAGTACGTGTGGCGCTGCG
TGCACTGCAACCTAGACTATGGACGTCACTCGAAGAGTATTGATCCCAAG
AGACATCGATGCCGATGCCAGGGCGTCTTGCAGCAGATCCAACCCAAGGT
GAGGAATGTGTCGCCATTGAAGAAGTCAGTGAACGTGCCAGCGCCGAGTG
TTAGGGGTTTGTTGAATGAAGTGGGCCGCGTCTTAAATGAGACGCAGAGG
CAGACGTAATCAGAGATACTTGGGGATGAACTTGTGGATGATGATCTAGG
AGGTATAATATTTGATGTATGTCATGACTGACGGTTGAATGATTTGTTAT
TAGCGATCATGTACATACATACAGCTTTTCGTTTAGTTCCTTTTTTTCCC
TCTAGGTGTACAAACAGACCAATCAAGATACATACACCGATTACTGTGTT
ACTCTTATATGTTTGTATAGTGATCCTTTGATTTTATC back to topCoding sequence (CDS) from alignment at ch8:4357016..4359653- >KJC3_012713-T1 ID=KJC3_012713-T1|Name=KJC3_012713-T1|organism=Aspergillus niger KJC3|type=CDS|length=4296bp|location=Sequence derived from alignment at ch8:4357016..4359653- (Aspergillus niger KJC3)
CAGTATCGAAGAAGTAGACGCCCCCACCAAGAAGCTCCCATCAAGGGATA
GTGTTCAACTGGAGACGCCCCCATCCAGTCCAACAAAGGGACGCAGTCTA
CGATCTCCAACCAAGCTGAAGGCCCACATACCACCAACACCACACCGAGA
AAGCGTCGACGCATTCTGGAGCCAGGAAAACACTAACAACTGGATCGACC
AGCACTCTCCGTGCAAGATCGACGATCTACTGCGCGAATTTGACGACTCC
GACTCGGATGATGAGTTCAGCGACAGGGAGATTATGCCCAAGACCGCAAC
ACCGAAGACGACGACCAAGTCCTCGACAAGAACACCCAGCAAGACAGCAA
TGAAAAAGGCCGAAGCAGAGCAGAGAAAGCTCGAGCGGGAGCGTGCAAAG
GCATTCATGGAGAACAGACAAGCCATGGCCGAGCAATTCTTCAAAGTCCT
CGACGACACCGTAACCGACGGCCGACTCTCAAGAATGACCGCCTCGACAG
GAGGCGTGATCATCGAATGGAAAAAGCGACTCCAAACGACCGCCGGCAGA
GCATCCTGGAAATGTGTTACCCCGTCACCGAAGAAGGGAGGAGGGCCGGC
CATGCCACCGCAGCATTATGCCACCATCGAATTAGCAGCAAAGGTAGTCG
ACTGCGAAGAACGCATTATCAAGACGGTCGCTCACGAGTTCTGTCATCTG
GCGAACTACATGATCTCAGGCGTGCATGATAACCCCCATGGGGCAAGCTT
TAAGGCATGGGGTCGCAAGTGCAAGGAAGCAATGAAGAACCATCCTGTCT
ATGGTGGGAAAGTCGAGGTCTCGATCAAGCACGACTACGCTATCGACTAT
AAGTACGTGTGGCGCTGCGTGCACTGCAACCTAGACTATGGACGTCACTC
GAAGAGTATTGATCCCAAGAGACATCGATGCCGATGCCAGGGCGTCTTGC
AGCAGATCCAACCCAAGGTGAGGAATGTGTCGCCATTGAAGAAGTCAGTG
AACGTGCCAGCGCCGAGTGTTAGGGGTTTGTTGAATGAAGTGGGCCGCGT
CTTAAATGAGACGCAGAGGCAGACGTAAATGGCTCGACTCAACCCCTCTA
GCCCCACGAAGCCAGCCAAGCTCCAAGAGCGCCGAACACCACCCGCGCAG
AGGAATCTCAACCGCACAGCGACCATCAAGCGGGACTCCAGAGACAACAA
ATACACCGCGACAGCCAAGGCCAAGACAGTAGAACAATGGGCAGCCGCCG
ACGAGACATGGACAAAGAGCCGATACTCCGCGAGCACGCCAGCGATCGAA
GAACCGTCGCAAAGGAAGAATAACAACAGACTACAAAGATCGGGGACTGT
TTCTAGTGGGGTATTCGATATCTTTTCGGACAATGGGGATGAGCAGAGTG
AAACGGAGGACAGCAGTTTCTCGTCGACTCGGTCTTTGATGTCGAATGAG
GGACGCACTACGGATCCTTTGAAGCTCTCGCAGATCAATTCTTTGTTGCT
TCCATTGTCGCAGCAGTCGCGGAATAATAGGGCGCCGCGTAAGTCGGTGG
GGTATAATTATGACAAGGAAAATGATCCTATCGACGATGAGGCAGAGGAG
GCAGATGAGAGTTCGGGTCTCTCTCGAAACTCGTCTACTGCTTCGAACCG
AGCGCCCACGCGTAATACTAACAGAGAAGTGCAGCCGCGGGGCAGGTCTC
GGACGAGGTATATGGGATACCGCCGGGAGGAGACAGAGTCTGAGGCTGAA
GAAAGCGAAGAGAATAATGGCTTTGACTCAATGGATGATTTCATTGTCAG
CGACAACGAAGAAATCAGCTACCATGAGACGTCCGACGATGAAAGCATCG
AAGAAGAACAAGAAGAGAAACAGCCAACTCCTTCGCCGCCCAGGACTAGA
AAGAGACTGCTTAGAGGGAGACGACCCCGTCCAGAAATAGAGCCAGAGAC
AACACCTCAGGATTCTCGGCGTGAAAGCCTCGATTTAGAGCCTTCAGTGC
CTGCTACGATGACAATGGAGGTTCCTAAGCTAGAGGCAAAGCCCAAGAGA
TTGTTTCAAAGCGAGTTGGAAATATCCGAGAAGCTGAACAAGCTGAAGTT
GGACAATAAAGACATAGAGCCCCAACTGGACGAGAAGAGCACTTATGACA
GTATCGAAGAAGTAGACGCCCCCACCAAGAAGCTCCCATCAAGGGATAGT
GTTCAACTGGAGACGCCCCCATCCAGTCCAACAAAGGGACGCAGTCTACG
ATCTCCAACCAAGCTGAAGGCCCACATACCACCAACACCACACCGAGAAA
GCGTCGACGCATTCTGGAGCCAGGAAAACACTAACAACTGGATCGACCAG
CACTCTCCGTGCAAGATCGACGATCTACTGCGCGAATTTGACGACTCCGA
CTCGGATGATGAGTTCAGCGACAGGGAGATTATGCCCAAGACCGCAACAC
CGAAGACGACGACCAAGTCCTCGACAAGAACACCCAGCAAGACAGCAATG
AAAAAGGCCGAAGCAGAGCAGAGAAAGCTCGAGCGGGAGCGTGCAAAGGC
ATTCATGGAGAACAGACAAGCCATGGCCGAGCAATTCTTCAAAGTCCTCG
ACGACACCGTAACCGACGGCCGACTCTCAAGAATGACCGCCTCGACAGGA
GGCGTGATCATCGAATGGAAAAAGCGACTCCAAACGACCGCCGGCAGAGC
ATCCTGGAAATGTGTTACCCCGTCACCGAAGAAGGGAGGAGGGCCGGCCA
TGCCACCGCAGCATTATGCCACCATCGAATTAGCAGCAAAGGTAGTCGAC
TGCGAAGAACGCATTATCAAGACGGTCGCTCACGAGTTCTGTCATCTGGC
GAACTACATGATCTCAGGCGTGCATGATAACCCCCATGGGGCAAGCTTTA
AGGCATGGGGTCGCAAGTGCAAGGAAGCAATGAAGAACCATCCTGTCTAT
GGTGGGAAAGTCGAGGTCTCGATCAAGCACGACTACGCTATCGACTATAA
GTACGTGTGGCGCTGCGTGCACTGCAACCTAGACTATGGACGTCACTCGA
AGAGTATTGATCCCAAGAGACATCGATGCCGATGCCAGGGCGTCTTGCAG
CAGATCCAACCCAAGGTGAGGAATGTGTCGCCATTGAAGAAGTCAGTGAA
CGTGCCAGCGCCGAGTGTTAGGGGTTTGTTGAATGAAGTGGGCCGCGTCT
TAAATGAGACGCAGAGGCAGACGTAAATGGCTCGACTCAACCCCTCTAGC
CCCACGAAGCCAGCCAAGCTCCAAGAGCGCCGAACACCACCCGCGCAGAG
GAATCTCAACCGCACAGCGACCATCAAGCGGGACTCCAGAGACAACAAAT
ACACCGCGACAGCCAAGGCCAAGACAGTAGAACAATGGGCAGCCGCCGAC
GAGACATGGACAAAGAGCCGATACTCCGCGAGCACGCCAGCGATCGAAGA
ACCGTCGCAAAGGAAGAATAACAACAGACTACAAAGATCGGGGACTGTTT
CTAGTGGGGTATTCGATATCTTTTCGGACAATGGGGATGAGCAGAGTGAA
ACGGAGGACAGCAGTTTCTCGTCGACTCGGTCTTTGATGTCGAATGAGGG
ACGCACTACGGATCCTTTGAAGCTCTCGCAGATCAATTCTTTGTTGCTTC
CATTGTCGCAGCAGTCGCGGAATAATAGGGCGCCGCGTAAGTCGGTGGGG
TATAATTATGACAAGGAAAATGATCCTATCGACGATGAGGCAGAGGAGGC
AGATGAGAGTTCGGGTCTCTCTCGAAACTCGTCTACTGCTTCGAACCGAG
CGCCCACGCGTAATACTAACAGAGAAGTGCAGCCGCGGGGCAGGTCTCGG
ACGAGGTATATGGGATACCGCCGGGAGGAGACAGAGTCTGAGGCTGAAGA
AAGCGAAGAGAATAATGGCTTTGACTCAATGGATGATTTCATTGTCAGCG
ACAACGAAGAAATCAGCTACCATGAGACGTCCGACGATGAAAGCATCGAA
GAAGAACAAGAAGAGAAACAGCCAACTCCTTCGCCGCCCAGGACTAGAAA
GAGACTGCTTAGAGGGAGACGACCCCGTCCAGAAATAGAGCCAGAGACAA
CACCTCAGGATTCTCGGCGTGAAAGCCTCGATTTAGAGCCTTCAGTGCCT
GCTACGATGACAATGGAGGTTCCTAAGCTAGAGGCAAAGCCCAAGAGATT
GTTTCAAAGCGAGTTGGAAATATCCGAGAAGCTGAACAAGCTGAAGTTGG
ACAATAAAGACATAGAGCCCCAACTGGACGAGAAGAGCACTTATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012713-T1.utr3p1 | KJC3_012713-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012713-T1.utr5p1 | KJC3_012713-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035240 |
| DBxref | InterPro:IPR006640 |
| DBxref | PFAM:PF17283 |
| DBxref | PFAM:PF10263 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4357016..4359653 - |
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