|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4376377..4377584+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012717-T1 ID=KJC3_012717-T1|Name=KJC3_012717-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1208bp|location=Sequence derived from alignment at ch8:4376377..4377584+ (Aspergillus niger KJC3)
ATGAAACGCCTCATGTACCTCCTCGTTGTGTTGCTGCTCAGCTATGTTGT
CTGCGCACTTCCCTATGGTGCGTCAACCTAAGATTACAAGTGTCTAACCT
ACCGATTGACCGAGATTGTAGACGACCATGGCAAAAAGCGCGATCTTGGT
CCACTGAGTGATCTCCCAGGAGGTGATGTGATTGTATGGGTGGACCAGGC
TGGAAATGCTCTTGCCAACAACGTCGTGGGCGGCGGCAATTCAGACCCAA
CTGCGACAGCAGACAATGTGAGTGCCACCCAAAAAGCACCGCTCCAGAGA
TAAAGTTAGGGTTCGGACTAACAGAATAGTCGCCTACAACCCTTCCACCA
ATATTATCGACTCTCGATGGAGATCTGGATCTCTCTCCCGCCGTCCCACT
CCCTGCATCTACCAACCTTCCAAAGACCGGGAATTACCGTCGCTTTGGCA
TCTCCTACTCTCCGTATAACAATGATGGCTCCTGCAAGTCCCAAGACCAA
GTCGACGAAGACCTGGACAAGCTGGCGCAATACGGGTTTGTCCGGATCTA
CGGCGTAGACTGTGACCAGACGAACAAGGTTACCAAAGCAGCGCGACAAC
GCAACCTGAAAGTTTTCGCCGGTGTTTTCGACTTGCAGAATTTCCCATCC
AGTCTTGACTACATCACCGGGGCTGCAAATGGGGACTGGTCCGTCTTTCA
CACCATCAATATCGGCAACGAACTGGTCAACGATGGTAAGAACTCGGCTG
CCGATGTCGTAAACGCAGTGAATACAGCACGCAGCAAGCTCCGCGCGGCA
GGGTACCAAGGGCCCGTGGTAACGGTGGATGCATTCTCAGTCATGATCCA
ACACCCCGAGCTCTGCCAAGCGTCTGATTACTGTGCTGCCAACTGCCATG
CCTTCTTCGACAACAACAACACCCCTGATAAAGCCGGCCAGTACGTCAAA
GACCAAGCCAACAAGGTCTCCAAAGCGGCCCGCGGCAAAAAGACGCTCAT
TAGCGAGTCAGGATGGCCGCACAACGGTCAACCCAATGGCAAGGCTGTGC
CGTCTTCGCTGAACCAGCAAAAGGCGGTTGCCAGCTTGCAGCAGACGTTC
ACTGGCGAGGATGAGTTGGTTCTCTTTACTGCCTTTGATGATCTGTGGAA
GCAAGACTCCTCTGGTACATTTGGAGCGGAGAAGTTCTGGGGCATCCAGA
AACACTGA back to topCoding sequence (CDS) from alignment at ch8:4376377..4377584+ >KJC3_012717-T1 ID=KJC3_012717-T1|Name=KJC3_012717-T1|organism=Aspergillus niger KJC3|type=CDS|length=3276bp|location=Sequence derived from alignment at ch8:4376377..4377584+ (Aspergillus niger KJC3)
ATGAAACGCCTCATGTACCTCCTCGTTGTGTTGCTGCTCAGCTATGTTGT
CTGCGCACTTCCCTATGACGACCATGGCAAAAAGCGCGATCTTGGTCCAC
TGAGTGATCTCCCAGGAGGTGATGTGATTGTATGGGTGGACCAGGCTGGA
AATGCTCTTGCCAACAACGTCGTGGGCGGCGGCAATTCAGACCCAACTGC
GACAGCAGACAATTCGCCTACAACCCTTCCACCAATATTATCGACTCTCG
ATGGAGATCTGGATCTCTCTCCCGCCGTCCCACTCCCTGCATCTACCAAC
CTTCCAAAGACCGGGAATTACCGTCGCTTTGGCATCTCCTACTCTCCGTA
TAACAATGATGGCTCCTGCAAGTCCCAAGACCAAGTCGACGAAGACCTGG
ACAAGCTGGCGCAATACGGGTTTGTCCGGATCTACGGCGTAGACTGTGAC
CAGACGAACAAGGTTACCAAAGCAGCGCGACAACGCAACCTGAAAGTTTT
CGCCGGTGTTTTCGACTTGCAGAATTTCCCATCCAGTCTTGACTACATCA
CCGGGGCTGCAAATGGGGACTGGTCCGTCTTTCACACCATCAATATCGGC
AACGAACTGGTCAACGATGGTAAGAACTCGGCTGCCGATGTCGTAAACGC
AGTGAATACAGCACGCAGCAAGCTCCGCGCGGCAGGGTACCAAGGGCCCG
TGGTAACGGTGGATGCATTCTCAGTCATGATCCAACACCCCGAGCTCTGC
CAAGCGTCTGATTACTGTGCTGCCAACTGCCATGCCTTCTTCGACAACAA
CAACACCCCTGATAAAGCCGGCCAGTACGTCAAAGACCAAGCCAACAAGG
TCTCCAAAGCGGCCCGCGGCAAAAAGACGCTCATTAGCGAGTCAGGATGG
CCGCACAACGGTCAACCCAATGGCAAGGCTGTGCCGTCTTCGCTGAACCA
GCAAAAGGCGGTTGCCAGCTTGCAGCAGACGTTCACTGGCGAGGATGAGT
TGGTTCTCTTTACTGCCTTTGATGATCTGTGGAAGCAAGACTCCTCTGGT
ACATTTGGAGCGGAGAAGTTCTGGGGCATCCAGAAACACTGAATGAAACG
CCTCATGTACCTCCTCGTTGTGTTGCTGCTCAGCTATGTTGTCTGCGCAC
TTCCCTATGACGACCATGGCAAAAAGCGCGATCTTGGTCCACTGAGTGAT
CTCCCAGGAGGTGATGTGATTGTATGGGTGGACCAGGCTGGAAATGCTCT
TGCCAACAACGTCGTGGGCGGCGGCAATTCAGACCCAACTGCGACAGCAG
ACAATTCGCCTACAACCCTTCCACCAATATTATCGACTCTCGATGGAGAT
CTGGATCTCTCTCCCGCCGTCCCACTCCCTGCATCTACCAACCTTCCAAA
GACCGGGAATTACCGTCGCTTTGGCATCTCCTACTCTCCGTATAACAATG
ATGGCTCCTGCAAGTCCCAAGACCAAGTCGACGAAGACCTGGACAAGCTG
GCGCAATACGGGTTTGTCCGGATCTACGGCGTAGACTGTGACCAGACGAA
CAAGGTTACCAAAGCAGCGCGACAACGCAACCTGAAAGTTTTCGCCGGTG
TTTTCGACTTGCAGAATTTCCCATCCAGTCTTGACTACATCACCGGGGCT
GCAAATGGGGACTGGTCCGTCTTTCACACCATCAATATCGGCAACGAACT
GGTCAACGATGGTAAGAACTCGGCTGCCGATGTCGTAAACGCAGTGAATA
CAGCACGCAGCAAGCTCCGCGCGGCAGGGTACCAAGGGCCCGTGGTAACG
GTGGATGCATTCTCAGTCATGATCCAACACCCCGAGCTCTGCCAAGCGTC
TGATTACTGTGCTGCCAACTGCCATGCCTTCTTCGACAACAACAACACCC
CTGATAAAGCCGGCCAGTACGTCAAAGACCAAGCCAACAAGGTCTCCAAA
GCGGCCCGCGGCAAAAAGACGCTCATTAGCGAGTCAGGATGGCCGCACAA
CGGTCAACCCAATGGCAAGGCTGTGCCGTCTTCGCTGAACCAGCAAAAGG
CGGTTGCCAGCTTGCAGCAGACGTTCACTGGCGAGGATGAGTTGGTTCTC
TTTACTGCCTTTGATGATCTGTGGAAGCAAGACTCCTCTGGTACATTTGG
AGCGGAGAAGTTCTGGGGCATCCAGAAACACTGAATGAAACGCCTCATGT
ACCTCCTCGTTGTGTTGCTGCTCAGCTATGTTGTCTGCGCACTTCCCTAT
GACGACCATGGCAAAAAGCGCGATCTTGGTCCACTGAGTGATCTCCCAGG
AGGTGATGTGATTGTATGGGTGGACCAGGCTGGAAATGCTCTTGCCAACA
ACGTCGTGGGCGGCGGCAATTCAGACCCAACTGCGACAGCAGACAATTCG
CCTACAACCCTTCCACCAATATTATCGACTCTCGATGGAGATCTGGATCT
CTCTCCCGCCGTCCCACTCCCTGCATCTACCAACCTTCCAAAGACCGGGA
ATTACCGTCGCTTTGGCATCTCCTACTCTCCGTATAACAATGATGGCTCC
TGCAAGTCCCAAGACCAAGTCGACGAAGACCTGGACAAGCTGGCGCAATA
CGGGTTTGTCCGGATCTACGGCGTAGACTGTGACCAGACGAACAAGGTTA
CCAAAGCAGCGCGACAACGCAACCTGAAAGTTTTCGCCGGTGTTTTCGAC
TTGCAGAATTTCCCATCCAGTCTTGACTACATCACCGGGGCTGCAAATGG
GGACTGGTCCGTCTTTCACACCATCAATATCGGCAACGAACTGGTCAACG
ATGGTAAGAACTCGGCTGCCGATGTCGTAAACGCAGTGAATACAGCACGC
AGCAAGCTCCGCGCGGCAGGGTACCAAGGGCCCGTGGTAACGGTGGATGC
ATTCTCAGTCATGATCCAACACCCCGAGCTCTGCCAAGCGTCTGATTACT
GTGCTGCCAACTGCCATGCCTTCTTCGACAACAACAACACCCCTGATAAA
GCCGGCCAGTACGTCAAAGACCAAGCCAACAAGGTCTCCAAAGCGGCCCG
CGGCAAAAAGACGCTCATTAGCGAGTCAGGATGGCCGCACAACGGTCAAC
CCAATGGCAAGGCTGTGCCGTCTTCGCTGAACCAGCAAAAGGCGGTTGCC
AGCTTGCAGCAGACGTTCACTGGCGAGGATGAGTTGGTTCTCTTTACTGC
CTTTGATGATCTGTGGAAGCAAGACTCCTCTGGTACATTTGGAGCGGAGA
AGTTCTGGGGCATCCAGAAACACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH17 |
| DBxref | InterPro:IPR017853 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4376377..4377584 + |
|
