|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4399621..4401362- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012723-T1 ID=KJC3_012723-T1|Name=KJC3_012723-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1742bp|location=Sequence derived from alignment at ch8:4399621..4401362- (Aspergillus niger KJC3)
ATGGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGCCTAGCCAACAT
CGCCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGAGGCGCAGTCCT
CTGGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGAAGGATCAATCG
CGGACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAGGAGACGCCGCA
GCCGCGGCGCATGTCATCCCGGCTGAGGGGCATCGCGGCGGAAAGCGAAG
TCGCGAAGCGCAAAGCTGAAGAAGAGTACGAGGCGCGGCAGGAAGCGGAG
CGCGCGAAACGAGTTCGCAAGTCGGATAACTTCTCGTTCAGTGATATTAT
GGTGAACGGGCAGAAGTTGCCTGCGGATGGATTGATCGGAGTAGATGTAG
TTACCAAGGGCGTGGCGATACCGTACCAGAGGACGTTTGGCGATGATGAG
ATCCAGAAGACGACGGATAAGGATCTGAAGGCGCTGAGGAAGGAGATGAA
TGGATTGACGCTCTGGGAGGCGTGGGAACCTAACCGTATGTCTCTCTTTC
TTTCCCTACTACCATCTTCCATTGGCTAACTAACCTCCATAACAGGCATT
AAATTGACCCCCGAACGAGTCTACACCATGACTTTCCACCCGACAGAATC
CAAACCTCTCATCTTCGCCGGCGACAAAATGGGCCACCTAGGCATTCTCG
ACGCCTCGCAAGAGAAGTCCACCTCCATCAAACCCGAGGACGACGAGGAA
TCCGACGACGAAGATCCGGACCCCGTCCTCACCACCGTAAAACCCCACAC
CCGGACAATCAGCAGCATGCACATCCACCCCAGCACACCGACGACCCTGT
ACACAGCCAGCTACGACAGTTCAATCCGCGCCATGGACCTCGAGAAGTCC
ACCAGCGTGGAGAAATACGCTCCGGAATCGACCTCCTCGGACGAGCCCAT
CTCCGGCATTGACATGGCACTCGACGATCCCAACGTGCTGTATTGGACAA
CGCTGGACGGGGCCTTTGGCCGGCACGACATCCGCACCGACCCAACAGCA
GAAACAGTAAACACATGGCAACTCTCCGAGAAGAAAATCGGCGGTTTCTC
ACTATACCCCACGCAACCGCACTATTTCGCAACAGCGAGTCTGGACCGCT
CAATGCGTCTGTGGGATTTGCGTATGCTGCAGAAACCTAAGAGGGGTAAG
AAAGATGAAGGGCCAACCCCAGTAGGAGAACACTACAGCCGGCTCTCCGT
CTCGCACGCAGCATTCAACAGCGCAGGACAAATCGCGACGTCTTCGTACG
ATGACACGCTCAAGATATACGATCTGAAGAAGAAGGGGATTTCGAACTGG
GATGTAGGGCATGCAGTTTCGGAGGATGAGTTGGGGCCTGATACCGTCGT
TAGACATAATTGTCAGACGGGGAGATGGGTAACTATGTATGTATACCCCT
TCCTGATTGGTCTCTTGTACTGGTTATTTCTCGAGAAAAGCGAGGTGCTA
ACGGAATGTTGTTTGGTGATAGTCTCCGCCCCCAGTGGCAACAGAACCCG
CAATCGCATATCCAGCGATTCTGTATTGGAAACATGAATCGGTTTGTGGA
TATCTATAGTGGGGAGGGGGATCAGCTGGCACAATTGGGCGGGGAGGGCA
TTACGGCTGTTCCGGCAGTGGCTGTCTTTCATCGGAGTAGGAATTGGGTT
GCGGGAGGGACGGCGAGTGGGAAGATTTGTTTGTGGATGTGA back to topCoding sequence (CDS) from alignment at ch8:4399621..4401362- >KJC3_012723-T1 ID=KJC3_012723-T1|Name=KJC3_012723-T1|organism=Aspergillus niger KJC3|type=CDS|length=4788bp|location=Sequence derived from alignment at ch8:4399621..4401362- (Aspergillus niger KJC3)
TCTCCGCCCCCAGTGGCAACAGAACCCGCAATCGCATATCCAGCGATTCT
GTATTGGAAACATGAATCGGTTTGTGGATATCTATAGTGGGGAGGGGGAT
CAGCTGGCACAATTGGGCGGGGAGGGCATTACGGCTGTTCCGGCAGTGGC
TGTCTTTCATCGGAGTAGGAATTGGGTTGCGGGAGGGACGGCGAGTGGGA
AGATTTGTTTGTGGATGTGAGCATTAAATTGACCCCCGAACGAGTCTACA
CCATGACTTTCCACCCGACAGAATCCAAACCTCTCATCTTCGCCGGCGAC
AAAATGGGCCACCTAGGCATTCTCGACGCCTCGCAAGAGAAGTCCACCTC
CATCAAACCCGAGGACGACGAGGAATCCGACGACGAAGATCCGGACCCCG
TCCTCACCACCGTAAAACCCCACACCCGGACAATCAGCAGCATGCACATC
CACCCCAGCACACCGACGACCCTGTACACAGCCAGCTACGACAGTTCAAT
CCGCGCCATGGACCTCGAGAAGTCCACCAGCGTGGAGAAATACGCTCCGG
AATCGACCTCCTCGGACGAGCCCATCTCCGGCATTGACATGGCACTCGAC
GATCCCAACGTGCTGTATTGGACAACGCTGGACGGGGCCTTTGGCCGGCA
CGACATCCGCACCGACCCAACAGCAGAAACAGTAAACACATGGCAACTCT
CCGAGAAGAAAATCGGCGGTTTCTCACTATACCCCACGCAACCGCACTAT
TTCGCAACAGCGAGTCTGGACCGCTCAATGCGTCTGTGGGATTTGCGTAT
GCTGCAGAAACCTAAGAGGGGTAAGAAAGATGAAGGGCCAACCCCAGTAG
GAGAACACTACAGCCGGCTCTCCGTCTCGCACGCAGCATTCAACAGCGCA
GGACAAATCGCGACGTCTTCGTACGATGACACGCTCAAGATATACGATCT
GAAGAAGAAGGGGATTTCGAACTGGGATGTAGGGCATGCAGTTTCGGAGG
ATGAGTTGGGGCCTGATACCGTCGTTAGACATAATTGTCAGACGGGGAGA
TGGGTAACTATATGGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGC
CTAGCCAACATCGCCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGA
GGCGCAGTCCTCTGGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGA
AGGATCAATCGCGGACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAG
GAGACGCCGCAGCCGCGGCGCATGTCATCCCGGCTGAGGGGCATCGCGGC
GGAAAGCGAAGTCGCGAAGCGCAAAGCTGAAGAAGAGTACGAGGCGCGGC
AGGAAGCGGAGCGCGCGAAACGAGTTCGCAAGTCGGATAACTTCTCGTTC
AGTGATATTATGGTGAACGGGCAGAAGTTGCCTGCGGATGGATTGATCGG
AGTAGATGTAGTTACCAAGGGCGTGGCGATACCGTACCAGAGGACGTTTG
GCGATGATGAGATCCAGAAGACGACGGATAAGGATCTGAAGGCGCTGAGG
AAGGAGATGAATGGATTGACGCTCTGGGAGGCGTGGGAACCTAACCTCTC
CGCCCCCAGTGGCAACAGAACCCGCAATCGCATATCCAGCGATTCTGTAT
TGGAAACATGAATCGGTTTGTGGATATCTATAGTGGGGAGGGGGATCAGC
TGGCACAATTGGGCGGGGAGGGCATTACGGCTGTTCCGGCAGTGGCTGTC
TTTCATCGGAGTAGGAATTGGGTTGCGGGAGGGACGGCGAGTGGGAAGAT
TTGTTTGTGGATGTGAGCATTAAATTGACCCCCGAACGAGTCTACACCAT
GACTTTCCACCCGACAGAATCCAAACCTCTCATCTTCGCCGGCGACAAAA
TGGGCCACCTAGGCATTCTCGACGCCTCGCAAGAGAAGTCCACCTCCATC
AAACCCGAGGACGACGAGGAATCCGACGACGAAGATCCGGACCCCGTCCT
CACCACCGTAAAACCCCACACCCGGACAATCAGCAGCATGCACATCCACC
CCAGCACACCGACGACCCTGTACACAGCCAGCTACGACAGTTCAATCCGC
GCCATGGACCTCGAGAAGTCCACCAGCGTGGAGAAATACGCTCCGGAATC
GACCTCCTCGGACGAGCCCATCTCCGGCATTGACATGGCACTCGACGATC
CCAACGTGCTGTATTGGACAACGCTGGACGGGGCCTTTGGCCGGCACGAC
ATCCGCACCGACCCAACAGCAGAAACAGTAAACACATGGCAACTCTCCGA
GAAGAAAATCGGCGGTTTCTCACTATACCCCACGCAACCGCACTATTTCG
CAACAGCGAGTCTGGACCGCTCAATGCGTCTGTGGGATTTGCGTATGCTG
CAGAAACCTAAGAGGGGTAAGAAAGATGAAGGGCCAACCCCAGTAGGAGA
ACACTACAGCCGGCTCTCCGTCTCGCACGCAGCATTCAACAGCGCAGGAC
AAATCGCGACGTCTTCGTACGATGACACGCTCAAGATATACGATCTGAAG
AAGAAGGGGATTTCGAACTGGGATGTAGGGCATGCAGTTTCGGAGGATGA
GTTGGGGCCTGATACCGTCGTTAGACATAATTGTCAGACGGGGAGATGGG
TAACTATATGGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGCCTAG
CCAACATCGCCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGAGGCG
CAGTCCTCTGGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGAAGGA
TCAATCGCGGACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAGGAGA
CGCCGCAGCCGCGGCGCATGTCATCCCGGCTGAGGGGCATCGCGGCGGAA
AGCGAAGTCGCGAAGCGCAAAGCTGAAGAAGAGTACGAGGCGCGGCAGGA
AGCGGAGCGCGCGAAACGAGTTCGCAAGTCGGATAACTTCTCGTTCAGTG
ATATTATGGTGAACGGGCAGAAGTTGCCTGCGGATGGATTGATCGGAGTA
GATGTAGTTACCAAGGGCGTGGCGATACCGTACCAGAGGACGTTTGGCGA
TGATGAGATCCAGAAGACGACGGATAAGGATCTGAAGGCGCTGAGGAAGG
AGATGAATGGATTGACGCTCTGGGAGGCGTGGGAACCTAACCTCTCCGCC
CCCAGTGGCAACAGAACCCGCAATCGCATATCCAGCGATTCTGTATTGGA
AACATGAATCGGTTTGTGGATATCTATAGTGGGGAGGGGGATCAGCTGGC
ACAATTGGGCGGGGAGGGCATTACGGCTGTTCCGGCAGTGGCTGTCTTTC
ATCGGAGTAGGAATTGGGTTGCGGGAGGGACGGCGAGTGGGAAGATTTGT
TTGTGGATGTGAGCATTAAATTGACCCCCGAACGAGTCTACACCATGACT
TTCCACCCGACAGAATCCAAACCTCTCATCTTCGCCGGCGACAAAATGGG
CCACCTAGGCATTCTCGACGCCTCGCAAGAGAAGTCCACCTCCATCAAAC
CCGAGGACGACGAGGAATCCGACGACGAAGATCCGGACCCCGTCCTCACC
ACCGTAAAACCCCACACCCGGACAATCAGCAGCATGCACATCCACCCCAG
CACACCGACGACCCTGTACACAGCCAGCTACGACAGTTCAATCCGCGCCA
TGGACCTCGAGAAGTCCACCAGCGTGGAGAAATACGCTCCGGAATCGACC
TCCTCGGACGAGCCCATCTCCGGCATTGACATGGCACTCGACGATCCCAA
CGTGCTGTATTGGACAACGCTGGACGGGGCCTTTGGCCGGCACGACATCC
GCACCGACCCAACAGCAGAAACAGTAAACACATGGCAACTCTCCGAGAAG
AAAATCGGCGGTTTCTCACTATACCCCACGCAACCGCACTATTTCGCAAC
AGCGAGTCTGGACCGCTCAATGCGTCTGTGGGATTTGCGTATGCTGCAGA
AACCTAAGAGGGGTAAGAAAGATGAAGGGCCAACCCCAGTAGGAGAACAC
TACAGCCGGCTCTCCGTCTCGCACGCAGCATTCAACAGCGCAGGACAAAT
CGCGACGTCTTCGTACGATGACACGCTCAAGATATACGATCTGAAGAAGA
AGGGGATTTCGAACTGGGATGTAGGGCATGCAGTTTCGGAGGATGAGTTG
GGGCCTGATACCGTCGTTAGACATAATTGTCAGACGGGGAGATGGGTAAC
TATATGGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGCCTAGCCAA
CATCGCCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGAGGCGCAGT
CCTCTGGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGAAGGATCAA
TCGCGGACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAGGAGACGCC
GCAGCCGCGGCGCATGTCATCCCGGCTGAGGGGCATCGCGGCGGAAAGCG
AAGTCGCGAAGCGCAAAGCTGAAGAAGAGTACGAGGCGCGGCAGGAAGCG
GAGCGCGCGAAACGAGTTCGCAAGTCGGATAACTTCTCGTTCAGTGATAT
TATGGTGAACGGGCAGAAGTTGCCTGCGGATGGATTGATCGGAGTAGATG
TAGTTACCAAGGGCGTGGCGATACCGTACCAGAGGACGTTTGGCGATGAT
GAGATCCAGAAGACGACGGATAAGGATCTGAAGGCGCTGAGGAAGGAGAT
GAATGGATTGACGCTCTGGGAGGCGTGGGAACCTAACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4399621..4401362 - |
|
